version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 598 38.85 0 623792..624733 + 313 108563022 - HPAG1_0597 - chemotaxis protein 599 40.54 0 624768..626501 + 577 108563023 aspS HPAG1_0598 - aspartyl-tRNA synthetase 600 39.24 0 626518..627093 + 191 108563024 adk HPAG1_0599 - adenylate kinase 601 34.63 -1 627119..628117 + 332 108563025 - HPAG1_0600 - putative lipopolysaccharide biosynthesis protein 602 36.77 0 628137..628718 + 193 108563026 - HPAG1_0601 - putative lipopolysaccharide biosynthesis protein 603 37.55 0 628657..629463 + 268 108563027 - HPAG1_0602 - putative lipopolysaccharide biosynthesis protein 604 40.23 0 629518..630039 + 173 108563028 - HPAG1_0603 - inorganic pyrophosphatase 605 37.97 0 630187..632493 - 768 108563029 - HPAG1_0604 - recombination and DNA strand exchange inhibitor protein 606 36.89 0 632451..632816 - 121 108563030 - HPAG1_0605 - hypothetical protein 607 38.59 0 632816..634165 - 449 108563031 murC HPAG1_0606 - UDP-N-acetylmuramate--L-alanine ligase 608 39.36 0 634158..635285 - 375 108563032 - HPAG1_0607 - hypothetical protein 609 42.69 0 635405..636484 + 359 108563033 ispG HPAG1_0608 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 610 41.21 0 636487..637692 + 401 108563034 - HPAG1_0609 - tetrahydrodipicolinate N-succinyltransferase 611 43.72 +1 637704..638762 + 352 108563035 - HPAG1_0610 - hypothetical protein 612 36.09 0 638995..639501 + 168 108563036 - HPAG1_0611 - hypothetical protein 613 41.09 0 639522..641042 + 506 108563037 - HPAG1_0612 - hypothetical protein 614 43.59 +1 641088..641672 - 194 108563038 - HPAG1_0613 - modulator of drug activity 615 46.58 +2 641803..642957 + 384 108563039 - HPAG1_0614 - quinone-reactive Ni/Fe hydrogenase HydA 616 42.77 0 642967..644703 + 578 108563040 - HPAG1_0615 - quinone-reactive Ni/Fe hydrogenase HydB 617 39.70 0 644717..645391 + 224 108563041 - HPAG1_0616 - quinone-reactive Ni/Fe hydrogenase HydC 618 43.76 +1 645388..645924 + 178 108563042 - HPAG1_0617 - quinone-reactive Ni/Fe hydrogenase HydD 619 37.30 0 645926..647464 + 512 108563043 - HPAG1_0618 - hypothetical protein 620 35.27 -1 647469..647882 - 137 108563044 - HPAG1_0619 - hypothetical protein 621 42.38 0 648011..648463 - 150 108563045 - HPAG1_0620 - hypothetical protein 622 38.31 0 648650..649573 + 307 108563046 - HPAG1_0621 - outer membrane protein HopH 623 39.74 0 649640..650326 - 228 108563047 - HPAG1_0622 - hypothetical protein 624 34.90 -1 650389..651666 + 425 108563048 - HPAG1_0623 - poly(A) polymerase 625 37.33 0 651674..651748 + 24 108563049 - HPAG1_0624 - hypothetical protein 626 41.61 0 651763..652620 + 285 108563050 - HPAG1_0625 - putative 3-hydroxyacid dehydrogenase 627 41.88 0 652622..652738 + 38 108563051 - HPAG1_0626 - NAD(P)H-flavin oxidoreductase 628 40.86 0 652717..653274 + 185 108563052 - HPAG1_0627 - NAD(P)H-flavin oxidoreductase 629 37.65 0 653440..654759 + 439 108563053 - HPAG1_0628 - glutamyl-tRNA synthetase 630 38.78 0 654756..655049 + 97 108563054 - HPAG1_0629 - hypothetical protein 631 38.15 0 655058..656740 + 560 108563055 - HPAG1_0630 - soluble lytic murein transglycosylase 632 42.58 0 656737..657558 + 273 108563056 - HPAG1_0631 - UDP-glucose pyrophosphorylase 633 35.29 -1 657569..657976 + 135 108563057 - HPAG1_0632 - hypothetical protein 634 44.84 +1 657979..659247 + 422 108563058 - HPAG1_0633 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 635 43.57 +1 659305..660711 + 468 108563059 aspA HPAG1_0634 - aspartate ammonia-lyase 636 40.16 0 660717..661346 + 209 108563060 - HPAG1_0635 - hypothetical protein 637 37.30 0 661355..662590 - 411 108563061 - HPAG1_0636 - alpha 1,3-fucosyltransferase 638 41.03 0 662721..663344 - 207 108563062 - HPAG1_0637 - phosphoserine phosphatase 639 38.49 0 663359..663862 - 167 108563063 - HPAG1_0638 - nonheme iron-containing ferritin 640 37.77 0 664161..665243 + 360 108563064 - HPAG1_0639 - hypothetical protein 641 42.78 0 665326..668076 + 916 108563065 - HPAG1_0640 - protective surface antigen D15 642 40.89 0 667988..669139 + 383 108563066 - HPAG1_0641 - hypothetical protein 643 38.18 0 669145..670443 + 432 108563067 - HPAG1_0642 - processing protease 644 42.02 0 670440..671867 + 475 108563068 gatB HPAG1_0643 - aspartyl/glutamyl-tRNA amidotransferase subunit B 645 38.39 0 671867..673111 + 414 108563069 - HPAG1_0644 - hypothetical protein 646 34.51 -1 673122..674138 + 338 108563070 - HPAG1_0645 - hypothetical protein 647 40.28 0 674125..674556 + 143 108563071 rnhA HPAG1_0646 - ribonuclease H 648 40.80 0 674565..675287 + 240 108563072 rnc HPAG1_0647 - ribonuclease III 649 42.71 0 675284..676381 + 365 108563073 - HPAG1_0648 - chorismate synthase 650 34.69 -1 676419..676934 + 171 108563074 - HPAG1_0649 - hypothetical protein 651 38.86 0 676934..678307 + 457 108563075 - HPAG1_0650 - coproporphyrinogen III oxidase 652 39.71 0 678304..679605 + 433 108563076 - HPAG1_0651 - glycerol-3-phosphate dehydrogenase 653 40.67 0 679681..680334 + 217 108563077 - HPAG1_0652 - hypothetical protein 654 39.93 0 680286..684455 + 1389 108563078 - HPAG1_0653 - hypothetical protein 655 43.42 +1 684699..685511 + 270 108563079 - HPAG1_0654 - outer membrane protein HorF 656 42.63 0 685670..686842 + 390 108563080 - HPAG1_0655 - aspartate aminotransferase 657 28.50 -2 686979..687929 + 316 108563081 - HPAG1_0656 - hypothetical protein 658 28.26 -2 687947..688813 + 288 108563082 - HPAG1_0657 - hypothetical protein 659 38.47 0 688821..689891 + 356 108563083 - HPAG1_0658 - integrase-recombinase protein 660 36.29 0 689954..690460 - 168 108563084 - HPAG1_0659 - methylated-DNA--protein-cysteine methyltransferase 661 38.02 0 690464..691231 - 255 108563085 - HPAG1_0660 - hypothetical protein 662 39.87 0 691345..692292 - 315 108563086 - HPAG1_0661 - putative lipopolysaccharide biosynthesis protein 663 40.60 0 692354..694720 - 788 108563087 - HPAG1_0662 - ribonucleotide-diphosphate reductase subunit alpha 664 42.42 0 694886..695380 - 164 108563088 - HPAG1_0663 - hypothetical protein 665 43.31 +1 695420..695860 - 146 108563089 - HPAG1_0664 - hypothetical protein 666 39.64 0 696123..696629 - 168 108563090 - HPAG1_0665 - hypothetical protein 667 43.31 +1 696669..697049 - 126 108563091 - HPAG1_0666 - hypothetical protein 668 42.24 0 697205..698506 - 433 108563092 - HPAG1_0667 - UDP-N-acetylglucosamine pyrophosphorylase 669 38.42 0 698588..699334 + 248 108563093 fliP HPAG1_0668 - flagellar biosynthesis protein FliP 670 39.97 0 699373..701676 - 767 108563094 - HPAG1_0669 - iron(III) dicitrate transport protein 671 40.10 0 701927..703861 - 644 108563095 - HPAG1_0670 - iron(II) transport protein 672 38.03 0 703975..704805 + 276 108563096 - HPAG1_0671 - hypothetical protein 673 30.45 -2 704859..706073 + 404 108563097 - HPAG1_0672 - putative type II cytosine specific methyltransferase 674 26.35 -2 706076..706948 + 290 108563098 - HPAG1_0673 - putative type II restriction enzyme 675 36.11 0 707082..707441 + 119 108563099 - HPAG1_0674 - hypothetical protein 676 46.00 +1 707722..708897 + 391 108563100 - HPAG1_0675 - acetyl coenzyme A acetyltransferase 677 43.63 +1 708908..709606 + 232 108563101 - HPAG1_0676 - succinyl-CoA-transferase subunit A 678 44.55 +1 709603..710226 + 207 108563102 - HPAG1_0677 - succinyl-CoA-transferase subunit B 679 40.81 0 710245..711609 + 454 108563103 - HPAG1_0678 - short-chain fatty acids transporter 680 39.32 0 711734..712735 + 333 108563104 - HPAG1_0679 - putative outer membrane protein 681 45.33 +1 712970..715111 + 713 108563105 - HPAG1_0680 - hydantoin utilization protein A 682 43.91 +1 715123..717420 + 765 108563106 - HPAG1_0681 - N-methylhydantoinase 683 41.81 0 717431..717937 + 168 108563107 - HPAG1_0682 - hypothetical protein 684 29.69 -2 718125..718316 + 63 108563108 - HPAG1_0683 - hypothetical protein 685 37.22 0 718326..719354 + 342 108563109 - HPAG1_0684 - hypothetical protein 686 40.31 0 719347..719733 + 128 108563110 - HPAG1_0685 - diacylglycerol kinase 687 41.10 0 719749..722232 + 827 108563111 - HPAG1_0686 - DNA gyrase subunit A 688 38.57 0 722229..722705 + 158 108563112 - HPAG1_0687 - hypothetical protein 689 40.05 0 722702..723847 + 381 108563113 - HPAG1_0688 - transcriptional activator of flagella proteins 690 38.98 0 723974..724504 + 176 108563114 - HPAG1_0689 - hypothetical protein 691 40.76 0 724748..727573 - 941 108563115 uvrA HPAG1_0690 - excinuclease ABC subunit A 692 41.48 0 727738..728559 + 273 108563116 - HPAG1_0691 - outer membrane protein HopE 693 39.48 0 728737..729663 + 308 108563117 mraW HPAG1_0692 - S-adenosyl-methyltransferase MraW 694 33.62 -1 729684..730028 + 114 108563118 - HPAG1_0693 - hypothetical protein 695 43.08 +1 730184..731086 + 300 108563119 - HPAG1_0694 - hypothetical protein 696 38.22 0 731310..733313 + 667 108563120 - HPAG1_0695 - putative outer membrane protein HomB 697 39.39 0 733504..734724 + 406 108563121 - HPAG1_0696 - hypothetical protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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