version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 558 36.53 0 574038..576068 - 676 108562982 - HPAG1_0557 - hypothetical protein 559 36.02 0 576074..576631 - 185 108562983 - HPAG1_0558 - hypothetical protein 560 39.32 0 576635..577753 - 372 108562984 - HPAG1_0559 - hypothetical protein 561 40.00 0 577729..578748 - 339 108562985 - HPAG1_0560 - dihydroorotase 562 39.54 0 578752..579717 - 321 108562986 - HPAG1_0561 - putative siderophore-mediated iron transport protein 563 36.73 0 579701..580582 - 293 108562987 - HPAG1_0562 - hypothetical protein 564 38.17 0 580579..580950 - 123 108562988 - HPAG1_0563 - flagellar motor switch protein 565 41.31 0 581032..581595 - 187 108562989 - HPAG1_0564 - endonuclease III 566 40.08 0 581678..581914 - 78 108562990 - HPAG1_0565 - hypothetical protein 567 35.17 -1 581916..584849 - 977 108562992 - HPAG1_0567 - hypothetical protein 568 37.88 0 584767..585756 + 329 108562991 - HPAG1_0566 - aminodeoxychorismate lyase 569 45.32 +1 585941..586282 + 113 108562993 oorD HPAG1_0568 - 2-oxoglutarate-acceptor oxidoreductase subunit OorD 570 44.50 +1 586282..587409 + 375 108562994 oorA HPAG1_0569 - 2-oxoglutarate-acceptor oxidoreductase subunit OorA 571 44.40 +1 587411..588232 + 273 108562995 oorB HPAG1_0570 - 2-oxoglutarate-acceptor oxidoreductase subunit OorB 572 41.98 0 588232..588786 + 184 108562996 oorC HPAG1_0571 - 2-oxoglutarate-acceptor oxidoreductase subunit OorC 573 29.97 -2 588896..589579 + 227 108562997 - HPAG1_0572 - hypothetical protein 574 31.49 -2 589645..590673 + 342 108562998 - HPAG1_0573 - hypothetical protein 575 36.36 0 590818..590982 + 54 108562999 - HPAG1_0574 - hypothetical protein 576 39.92 0 590991..592463 + 490 108563000 - HPAG1_0575 - hypothetical protein 577 40.41 0 592938..593516 + 192 108563001 - HPAG1_0576 - tumor necrosis factor alpha-inducing protein 578 41.11 0 593519..595498 - 659 108563002 - HPAG1_0577 - penicillin-binding protein 1A 579 39.04 0 595498..596619 - 373 108563003 - HPAG1_0578 - 8-amino-7-oxononanoate synthase 580 38.94 0 596642..597943 - 433 108563004 - HPAG1_0579 - hemolysin secretion protein 581 31.58 -2 598015..598929 - 304 108563005 - HPAG1_0580 - multidrug resistance protein 582 31.88 -2 598895..599791 - 298 108563006 - HPAG1_0581 - multidrug resistance protein 583 44.55 +1 599960..601492 + 510 108563007 - HPAG1_0582 - flagellin A 584 35.16 -1 601610..602266 + 218 108563008 - HPAG1_0583 - 3-methyladenine DNA glycosylase 585 38.67 0 602263..602880 + 205 108563009 - HPAG1_0584 - hypothetical protein 586 40.86 0 602946..603968 + 340 108563010 hemE HPAG1_0585 - uroporphyrinogen decarboxylase 587 39.26 0 603978..605411 + 477 108563011 - HPAG1_0586 - hypothetical protein 588 39.86 0 605422..606126 + 234 108563012 - HPAG1_0587 - membrane fusion protein of the hefABC efflux system HefB 589 42.47 0 606139..609225 + 1028 108563013 - HPAG1_0588 - cytoplasmic pump protein of the hefABC efflux system HefC 590 38.95 0 609222..609791 + 189 108563014 - HPAG1_0589 - hypothetical protein 591 39.39 0 609910..619467 + 3185 108563015 - HPAG1_0590 - putative vacuolating cytotoxin (VacA)-like protein 592 30.59 -2 619529..620038 - 169 108563016 - HPAG1_0591 - hypothetical protein 593 30.83 -2 620046..620285 - 79 108563017 - HPAG1_0592 - ABC transporter, permease 594 33.96 -1 620285..620761 - 158 108563018 - HPAG1_0593 - ABC transporter, ATP-binding protein 595 32.07 -1 620745..620981 - 78 108563019 - HPAG1_0594 - ABC transporter, ATP-binding protein 596 38.44 0 621287..621619 - 110 108563020 - HPAG1_0595 - hypothetical protein 597 39.57 0 621744..623714 - 656 108563021 ligA HPAG1_0596 - NAD-dependent DNA ligase LigA 598 38.85 0 623792..624733 + 313 108563022 - HPAG1_0597 - chemotaxis protein 599 40.54 0 624768..626501 + 577 108563023 aspS HPAG1_0598 - aspartyl-tRNA synthetase 600 39.24 0 626518..627093 + 191 108563024 adk HPAG1_0599 - adenylate kinase 601 34.63 -1 627119..628117 + 332 108563025 - HPAG1_0600 - putative lipopolysaccharide biosynthesis protein 602 36.77 0 628137..628718 + 193 108563026 - HPAG1_0601 - putative lipopolysaccharide biosynthesis protein 603 37.55 0 628657..629463 + 268 108563027 - HPAG1_0602 - putative lipopolysaccharide biosynthesis protein 604 40.23 0 629518..630039 + 173 108563028 - HPAG1_0603 - inorganic pyrophosphatase 605 37.97 0 630187..632493 - 768 108563029 - HPAG1_0604 - recombination and DNA strand exchange inhibitor protein 606 36.89 0 632451..632816 - 121 108563030 - HPAG1_0605 - hypothetical protein 607 38.59 0 632816..634165 - 449 108563031 murC HPAG1_0606 - UDP-N-acetylmuramate--L-alanine ligase 608 39.36 0 634158..635285 - 375 108563032 - HPAG1_0607 - hypothetical protein 609 42.69 0 635405..636484 + 359 108563033 ispG HPAG1_0608 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 610 41.21 0 636487..637692 + 401 108563034 - HPAG1_0609 - tetrahydrodipicolinate N-succinyltransferase 611 43.72 +1 637704..638762 + 352 108563035 - HPAG1_0610 - hypothetical protein 612 36.09 0 638995..639501 + 168 108563036 - HPAG1_0611 - hypothetical protein 613 41.09 0 639522..641042 + 506 108563037 - HPAG1_0612 - hypothetical protein 614 43.59 +1 641088..641672 - 194 108563038 - HPAG1_0613 - modulator of drug activity 615 46.58 +2 641803..642957 + 384 108563039 - HPAG1_0614 - quinone-reactive Ni/Fe hydrogenase HydA 616 42.77 0 642967..644703 + 578 108563040 - HPAG1_0615 - quinone-reactive Ni/Fe hydrogenase HydB 617 39.70 0 644717..645391 + 224 108563041 - HPAG1_0616 - quinone-reactive Ni/Fe hydrogenase HydC 618 43.76 +1 645388..645924 + 178 108563042 - HPAG1_0617 - quinone-reactive Ni/Fe hydrogenase HydD 619 37.30 0 645926..647464 + 512 108563043 - HPAG1_0618 - hypothetical protein 620 35.27 -1 647469..647882 - 137 108563044 - HPAG1_0619 - hypothetical protein 621 42.38 0 648011..648463 - 150 108563045 - HPAG1_0620 - hypothetical protein 622 38.31 0 648650..649573 + 307 108563046 - HPAG1_0621 - outer membrane protein HopH 623 39.74 0 649640..650326 - 228 108563047 - HPAG1_0622 - hypothetical protein 624 34.90 -1 650389..651666 + 425 108563048 - HPAG1_0623 - poly(A) polymerase 625 37.33 0 651674..651748 + 24 108563049 - HPAG1_0624 - hypothetical protein 626 41.61 0 651763..652620 + 285 108563050 - HPAG1_0625 - putative 3-hydroxyacid dehydrogenase 627 41.88 0 652622..652738 + 38 108563051 - HPAG1_0626 - NAD(P)H-flavin oxidoreductase 628 40.86 0 652717..653274 + 185 108563052 - HPAG1_0627 - NAD(P)H-flavin oxidoreductase 629 37.65 0 653440..654759 + 439 108563053 - HPAG1_0628 - glutamyl-tRNA synthetase 630 38.78 0 654756..655049 + 97 108563054 - HPAG1_0629 - hypothetical protein 631 38.15 0 655058..656740 + 560 108563055 - HPAG1_0630 - soluble lytic murein transglycosylase 632 42.58 0 656737..657558 + 273 108563056 - HPAG1_0631 - UDP-glucose pyrophosphorylase 633 35.29 -1 657569..657976 + 135 108563057 - HPAG1_0632 - hypothetical protein 634 44.84 +1 657979..659247 + 422 108563058 - HPAG1_0633 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 635 43.57 +1 659305..660711 + 468 108563059 aspA HPAG1_0634 - aspartate ammonia-lyase 636 40.16 0 660717..661346 + 209 108563060 - HPAG1_0635 - hypothetical protein 637 37.30 0 661355..662590 - 411 108563061 - HPAG1_0636 - alpha 1,3-fucosyltransferase 638 41.03 0 662721..663344 - 207 108563062 - HPAG1_0637 - phosphoserine phosphatase 639 38.49 0 663359..663862 - 167 108563063 - HPAG1_0638 - nonheme iron-containing ferritin 640 37.77 0 664161..665243 + 360 108563064 - HPAG1_0639 - hypothetical protein 641 42.78 0 665326..668076 + 916 108563065 - HPAG1_0640 - protective surface antigen D15 642 40.89 0 667988..669139 + 383 108563066 - HPAG1_0641 - hypothetical protein 643 38.18 0 669145..670443 + 432 108563067 - HPAG1_0642 - processing protease 644 42.02 0 670440..671867 + 475 108563068 gatB HPAG1_0643 - aspartyl/glutamyl-tRNA amidotransferase subunit B 645 38.39 0 671867..673111 + 414 108563069 - HPAG1_0644 - hypothetical protein 646 34.51 -1 673122..674138 + 338 108563070 - HPAG1_0645 - hypothetical protein 647 40.28 0 674125..674556 + 143 108563071 rnhA HPAG1_0646 - ribonuclease H 648 40.80 0 674565..675287 + 240 108563072 rnc HPAG1_0647 - ribonuclease III 649 42.71 0 675284..676381 + 365 108563073 - HPAG1_0648 - chorismate synthase 650 34.69 -1 676419..676934 + 171 108563074 - HPAG1_0649 - hypothetical protein 651 38.86 0 676934..678307 + 457 108563075 - HPAG1_0650 - coproporphyrinogen III oxidase 652 39.71 0 678304..679605 + 433 108563076 - HPAG1_0651 - glycerol-3-phosphate dehydrogenase 653 40.67 0 679681..680334 + 217 108563077 - HPAG1_0652 - hypothetical protein 654 39.93 0 680286..684455 + 1389 108563078 - HPAG1_0653 - hypothetical protein 655 43.42 +1 684699..685511 + 270 108563079 - HPAG1_0654 - outer membrane protein HorF 656 42.63 0 685670..686842 + 390 108563080 - HPAG1_0655 - aspartate aminotransferase 657 28.50 -2 686979..687929 + 316 108563081 - HPAG1_0656 - hypothetical protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0