version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 470 41.34 0 485246..486307 + 353 108562894 mraY HPAG1_0469 - phospho-N-acetylmuramoyl-pentapeptide-transferase 471 36.88 0 486309..487577 + 422 108562895 murD HPAG1_0470 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 472 34.48 -1 487574..487834 - 86 108562896 - HPAG1_0471 - hypothetical protein 473 39.55 0 487824..488225 - 133 108562897 - HPAG1_0472 - hypothetical protein 474 37.55 0 488456..489784 + 442 108562898 - HPAG1_0473 - sodium- and chloride-dependent transporter 475 38.00 0 489795..491123 + 442 108562899 - HPAG1_0474 - sodium- and chloride-dependent transporter 476 40.17 0 491138..492205 + 355 108562900 - HPAG1_0475 - phospholipase A1 477 35.91 0 492262..493386 + 374 108562901 - HPAG1_0476 - DNA polymerase III subunit beta 478 40.57 0 493399..495720 + 773 108562902 gyrB HPAG1_0477 - DNA gyrase subunit B 479 34.34 -1 495766..496758 + 330 108562903 - HPAG1_0478 - hypothetical protein 480 30.16 -2 496745..497500 + 251 108562904 - HPAG1_0479 - hypothetical protein 481 38.78 0 497716..498927 + 403 108562905 - HPAG1_0480 - putative outer membrane protein 482 37.00 0 498927..499553 + 208 108562906 - HPAG1_0481 - hypothetical protein 483 37.58 0 499594..500913 + 439 108562907 - HPAG1_0482 - hypothetical protein 484 42.39 0 500915..502294 + 459 108562908 - HPAG1_0483 - glycolate oxidase subunit 485 41.70 0 502317..503081 + 254 108562909 - HPAG1_0484 - dihydrodipicolinate reductase 486 38.46 0 503415..503531 + 38 108562910 - HPAG1_0485 - urease-enhancing factor 487 42.39 0 503801..505246 - 481 108562911 - HPAG1_0486 - glutamine synthetase 488 34.10 -1 505385..507481 + 698 108562912 - HPAG1_0487 - hypothetical protein 489 40.22 0 507547..507996 + 149 108562913 rplI HPAG1_0488 - 50S ribosomal protein L9 490 44.01 +1 508000..508542 + 180 108562914 - HPAG1_0489 - ATP-dependent protease peptidase subunit 491 38.74 0 508542..509873 + 443 108562915 hslU HPAG1_0490 - ATP-dependent protease ATP-binding subunit 492 37.42 0 509873..510778 + 301 108562916 era HPAG1_0491 - GTP-binding protein Era 493 38.27 0 510775..511767 + 330 108562917 - HPAG1_0492 - hypothetical protein 494 35.79 0 511846..512700 - 284 108562918 - HPAG1_0493 - hypothetical protein 495 32.92 -1 512719..512958 + 79 108562919 - HPAG1_0494 - IS606 transposase 496 36.78 0 513044..513391 + 115 108562920 - HPAG1_0495 - cag pathogenicity island protein 1 497 33.73 -1 513407..514165 + 252 108562921 - HPAG1_0496 - HP0521B-like protein 498 39.00 0 514158..515603 + 481 108562922 - HPAG1_0497 - cag pathogenicity island protein 3 499 37.65 0 515613..516122 + 169 108562923 - HPAG1_0498 - cag pathogenicity island protein 4 500 37.61 0 516241..518487 - 748 108562924 - HPAG1_0499 - cag pathogenicity island protein 5 501 36.86 0 518496..519488 - 330 108562925 - HPAG1_0500 - cag pathogenicity island encoded protein/ATPase protein 502 34.00 -1 519493..520092 - 199 108562926 - HPAG1_0501 - cag pathogenicity island protein Z 503 38.19 0 520227..524114 - 1295 108562927 - HPAG1_0502 - cag pathogenicity island protein Y 504 35.24 -1 524173..526161 - 662 108562928 - HPAG1_0503 - cag pathogenicity island protein Y 505 34.29 -1 526176..527747 - 523 108562929 - HPAG1_0504 - cag pathogenicity island protein X 506 36.13 0 527797..529404 - 535 108562930 - HPAG1_0505 - cag pathogenicity island protein W 507 34.39 -1 529409..530167 - 252 108562931 - HPAG1_0506 - cag pathogenicity island protein V 508 34.56 -1 530565..531215 + 216 108562932 - HPAG1_0507 - cag pathogenicity island protein U 509 36.77 0 531228..532070 + 280 108562933 - HPAG1_0508 - cag pathogenicity island protein T 510 30.00 -2 532188..532277 - 29 108562934 - HPAG1_0509 - hypothetical protein 511 32.50 -1 532270..532869 - 199 108562935 - HPAG1_0510 - cag pathogenicity island protein S 512 34.65 -1 533301..533681 - 126 108562936 - HPAG1_0511 - cag pathogenicity island protein Q 513 34.31 -1 534882..536012 + 376 108562937 - HPAG1_0512 - cag pathogenicity island protein M 514 34.31 -1 536027..536947 + 306 108562938 - HPAG1_0513 - cag pathogenicity island protein N 515 35.01 -1 537029..537742 - 237 108562939 - HPAG1_0514 - cag pathogenicity island protein L 516 38.66 0 537739..538884 - 381 108562940 - HPAG1_0515 - cag pathogenicity island protein I 517 40.52 0 538895..540007 - 370 108562941 - HPAG1_0516 - cag pathogenicity island protein H 518 36.13 0 540024..540452 - 142 108562942 - HPAG1_0517 - cag pathogenicity island protein G 519 31.35 -2 540507..541313 - 268 108562943 - HPAG1_0518 - cag pathogenicity island protein F 520 38.27 0 541315..542631 - 438 108562944 - HPAG1_0519 - cag pathogenicity island protein E 521 34.14 -1 542661..544265 - 534 108562945 - HPAG1_0520 - cag pathogenicity island protein E 522 32.26 -1 544274..544924 - 216 108562946 - HPAG1_0521 - cag pathogenicity island protein D 523 43.10 +1 544899..545246 - 115 108562947 - HPAG1_0522 - cag pathogenicity island protein C 524 33.77 -1 545391..545618 - 75 108562948 - HPAG1_0523 - cag pathogenicity island protein B 525 37.41 0 546049..549651 + 1200 108562949 - HPAG1_0524 - cytotoxin-associated protein A 526 35.33 -1 549714..549863 - 49 108562950 - HPAG1_0525 - transposase B-like protein 527 35.26 -1 549878..550033 - 51 108562951 - HPAG1_0526 - transposase B-like protein 528 40.89 0 550135..550902 - 255 108562952 - HPAG1_0527 - glutamate racemase 529 42.67 0 550939..552255 - 438 108562953 rho HPAG1_0528 - transcription termination factor Rho 530 39.71 0 552519..552722 + 67 108562954 rpmE HPAG1_0529 - 50S ribosomal protein L31 531 41.44 0 552747..553610 + 287 108562955 - HPAG1_0530 - hypothetical protein 532 39.91 0 553623..554306 + 227 108562956 - HPAG1_0531 - hypothetical protein 533 33.85 -1 554319..555284 + 321 108562957 - HPAG1_0532 - hypothetical protein 534 36.74 0 555281..556102 + 273 108562958 - HPAG1_0533 - hypothetical protein 535 38.13 0 556166..556603 - 145 108562959 - HPAG1_0534 - hypothetical protein 536 40.58 0 557048..557986 - 312 108562960 - HPAG1_0535 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 537 44.63 +1 558008..559246 - 412 108562961 - HPAG1_0536 - 3-oxoacyl-(acyl carrier protein) synthase II 538 37.96 0 559262..559369 - 35 108562962 - HPAG1_0537 - hypothetical protein 539 43.04 +1 559558..559794 - 78 108562963 - HPAG1_0538 - acyl carrier protein 540 23.46 -2 559847..559927 - 26 108562964 - HPAG1_0539 - hypothetical protein 541 43.28 +1 560025..560768 - 247 108562965 fabG HPAG1_0540 - 3-ketoacyl-(acyl-carrier-protein) reductase 542 38.03 0 560810..561022 - 70 108562966 rpsU HPAG1_0541 - 30S ribosomal protein S21 543 39.57 0 561122..562372 - 416 108562967 - HPAG1_0542 - hypothetical protein 544 34.16 -1 562544..562786 + 80 108562968 - HPAG1_0543 - hypothetical protein 545 41.98 0 562810..563457 - 215 108562969 - HPAG1_0544 - hypothetical protein 546 38.93 0 563564..564385 - 273 108562970 dapF HPAG1_0545 - diaminopimelate epimerase 547 36.86 0 564500..565549 + 349 108562971 - HPAG1_0546 - membrane protein 548 38.67 0 565907..566674 - 255 108562972 - HPAG1_0547 - hypothetical protein 549 40.60 0 566818..567918 - 366 108562973 - HPAG1_0548 - translation-associated GTPase 550 40.98 0 567920..569410 - 496 108562974 - HPAG1_0549 - leucyl aminopeptidase 551 40.93 0 569458..570036 - 192 108562975 - HPAG1_0550 - hypothetical protein 552 43.70 +1 570051..570590 - 179 108562976 - HPAG1_0551 - adenine phosphoribosyltransferase 553 35.74 0 570648..570980 - 110 108562977 - HPAG1_0552 - hypothetical protein 554 40.48 0 571025..571486 - 153 108562978 - HPAG1_0553 - ribose-5-phosphate isomerase B 555 41.49 0 571507..572205 - 232 108562979 - HPAG1_0554 - hypothetical protein 556 39.98 0 572214..573086 - 290 108562980 - HPAG1_0555 - signal peptidase I 557 42.43 0 573086..573964 - 292 108562981 - HPAG1_0556 - methylene-tetrahydrofolate dehydrogenase 558 36.53 0 574038..576068 - 676 108562982 - HPAG1_0557 - hypothetical protein 559 36.02 0 576074..576631 - 185 108562983 - HPAG1_0558 - hypothetical protein 560 39.32 0 576635..577753 - 372 108562984 - HPAG1_0559 - hypothetical protein 561 40.00 0 577729..578748 - 339 108562985 - HPAG1_0560 - dihydroorotase 562 39.54 0 578752..579717 - 321 108562986 - HPAG1_0561 - putative siderophore-mediated iron transport protein 563 36.73 0 579701..580582 - 293 108562987 - HPAG1_0562 - hypothetical protein 564 38.17 0 580579..580950 - 123 108562988 - HPAG1_0563 - flagellar motor switch protein 565 41.31 0 581032..581595 - 187 108562989 - HPAG1_0564 - endonuclease III 566 40.08 0 581678..581914 - 78 108562990 - HPAG1_0565 - hypothetical protein 567 35.17 -1 581916..584849 - 977 108562992 - HPAG1_0567 - hypothetical protein 568 37.88 0 584767..585756 + 329 108562991 - HPAG1_0566 - aminodeoxychorismate lyase 569 45.32 +1 585941..586282 + 113 108562993 oorD HPAG1_0568 - 2-oxoglutarate-acceptor oxidoreductase subunit OorD 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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