version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 295 36.08 0 305793..306665 + 290 108562719 - HPAG1_0294 - hypothetical protein 296 36.67 0 306666..308345 + 559 108562720 - HPAG1_0295 - para-aminobenzoate synthetase 297 44.90 +1 308534..309553 + 339 108562721 amiE HPAG1_0296 - acylamide amidohydrolase 298 39.61 0 309635..312121 - 828 108562722 flgL HPAG1_0297 - flagellar hook-associated protein FlgL 299 40.95 0 312354..312668 + 104 108562723 rplU HPAG1_0298 - 50S ribosomal protein L21 300 44.57 +1 312683..312949 + 88 108562724 rpmA HPAG1_0299 - 50S ribosomal protein L27 301 41.58 0 313066..314715 + 549 108562725 - HPAG1_0300 - periplasmic dipeptide-binding protein 302 44.98 +1 314726..315730 + 334 108562726 - HPAG1_0301 - dipeptide permease protein 303 46.50 +2 315730..316587 + 285 108562727 - HPAG1_0302 - dipeptide permease protein 304 42.36 0 316599..317462 + 287 108562728 - HPAG1_0303 - dipeptide ABC transporter 305 42.13 0 317459..318265 + 268 108562729 - HPAG1_0304 - dipeptide ABC transporter 306 44.41 +1 318284..319366 + 360 108562730 obgE HPAG1_0305 - GTPase ObgE 307 41.97 0 319408..320403 + 331 108562731 - HPAG1_0306 - hypothetical protein 308 38.38 0 320649..321203 + 184 108562732 - HPAG1_0307 - hypothetical protein 309 43.70 +1 321213..322505 + 430 108562733 - HPAG1_0308 - glutamate-1-semialdehyde aminotransferase 310 37.12 0 322510..322773 + 87 108562734 - HPAG1_0309 - hypothetical protein 311 36.54 0 322789..323193 + 134 108562735 - HPAG1_0310 - hypothetical protein 312 41.52 0 323277..324155 + 292 108562736 - HPAG1_0311 - hypothetical protein 313 45.12 +1 324168..325049 + 293 108562737 - HPAG1_0312 - hypothetical protein 314 31.89 -2 325103..325795 - 230 108562738 - HPAG1_0313 - type II restriction enzyme 315 35.86 0 325806..326915 - 369 108562739 - HPAG1_0314 - DNA methylase 316 42.12 0 327010..327396 + 128 108562740 - HPAG1_0315 - hypothetical protein 317 41.72 0 327396..328361 + 321 108562741 - HPAG1_0316 - ATP/GTP binding protein 318 41.10 0 328367..329512 - 381 108562742 - HPAG1_0317 - nitrite extrusion protein 319 31.78 -2 330274..330531 - 85 108562743 - HPAG1_0318 - hypothetical protein 320 31.78 -2 330524..330652 - 42 108562744 - HPAG1_0319 - hypothetical protein 321 43.31 +1 331459..333582 - 707 108562745 - HPAG1_0320 - outer membrane protein 322 40.48 0 333867..334622 - 251 108562746 - HPAG1_0321 - hypothetical protein 323 38.07 0 334685..336310 - 541 108562747 argS HPAG1_0322 - arginyl-tRNA synthetase 324 39.58 0 336313..336552 - 79 108562748 - HPAG1_0323 - sec-independent protein translocase protein 325 38.33 0 336623..337243 - 206 108562749 gmk HPAG1_0324 - guanylate kinase 326 38.18 0 337236..338660 - 474 108562750 - HPAG1_0325 - poly E-rich protein 327 38.67 0 338802..339344 + 180 108562751 - HPAG1_0326 - membrane bound endonuclease 328 40.13 0 339353..340117 - 254 108562752 - HPAG1_0327 - outer membrane protein HorC 329 41.18 0 340220..340933 + 237 108562753 flgH HPAG1_0328 - flagellar basal body L-ring protein 330 37.68 0 340952..341641 + 229 108562754 - HPAG1_0329 - CMP-N-acetylneuraminic acid synthetase 331 36.64 0 341632..342507 + 291 108562755 - HPAG1_0330 - CMP-N-acetylneuraminic acid synthetase 332 31.49 -2 342504..343046 + 180 108562756 - HPAG1_0331 - flagellar biosynthesis protein G 333 37.81 0 342979..343917 - 312 108562757 lpxK HPAG1_0332 - tetraacyldisaccharide 4'-kinase 334 37.29 0 343914..344696 - 260 108562758 - HPAG1_0333 - NH(3)-dependent NAD+ synthetase 335 41.79 0 344945..345937 + 330 108562759 - HPAG1_0334 - ketol-acid reductoisomerase 336 41.88 0 345961..346767 + 268 108562760 - HPAG1_0335 - cell division inhibitor 337 37.61 0 346764..346997 + 77 108562761 minE HPAG1_0336 - cell division topological specificity factor MinE 338 41.57 0 347009..347809 + 266 108562762 - HPAG1_0337 - DNA processing chain A 339 41.98 0 347806..348210 + 134 108562763 - HPAG1_0338 - Holliday junction resolvase-like protein 340 36.72 0 348318..348908 + 196 108562764 - HPAG1_0339 - cysteine-rich protein H 341 31.56 -2 349095..349433 + 112 108562765 - HPAG1_0340 - hypothetical protein 342 36.01 0 349417..349977 + 186 108562766 - HPAG1_0341 - hypothetical protein 343 41.50 0 350080..350961 - 293 108562767 - HPAG1_0342 - hypothetical protein 344 40.55 0 350961..352511 - 516 108562768 - HPAG1_0343 - single-stranded-DNA specific exonuclease 345 42.12 0 352521..354137 - 538 108562769 - HPAG1_0344 - CTP synthetase 346 38.01 0 354395..355057 + 220 108562770 - HPAG1_0345 - hypothetical protein 347 39.38 0 355101..356804 + 567 108562771 fliF HPAG1_0346 - flagellar MS-ring protein 348 40.89 0 356822..357853 + 343 108562772 fliG HPAG1_0347 - flagellar motor switch protein G 349 37.07 0 357840..358616 + 258 108562773 fliH HPAG1_0348 - flagellar assembly protein H 350 43.46 +1 358613..360469 + 618 108562774 - HPAG1_0349 - 1-deoxy-D-xylulose-5-phosphate synthase 351 42.18 0 360466..362274 + 602 108562775 - HPAG1_0350 - GTP-binding protein LepA 352 34.93 -1 362289..362978 + 229 108562776 - HPAG1_0351 - hypothetical protein 353 39.06 0 362989..363285 + 98 108562777 - HPAG1_0352 - hypothetical protein 354 29.33 -2 363326..363400 - 24 108562778 - HPAG1_0353 - hypothetical protein 355 37.09 0 363538..363750 + 70 108562779 - HPAG1_0354 - hypothetical protein 356 42.10 0 363968..364777 - 269 108562780 - HPAG1_0355 - flagellar basal-body rod protein 357 40.05 0 364832..366112 - 426 108562781 - HPAG1_0356 - alpha-ketoglutarate permease 358 40.68 0 366295..368907 - 870 108562782 - HPAG1_0357 - cell division protein 359 35.39 -1 368877..371210 - 777 108562783 - HPAG1_0358 - hypothetical protein 360 44.43 +1 371207..373135 - 642 108562784 - HPAG1_0359 - transketolase 361 37.60 0 373179..374021 - 280 108562785 - HPAG1_0360 - bifunctional riboflavin kinase/FMN adenylyltransferase 362 36.72 0 373987..374694 - 235 108562786 - HPAG1_0361 - hemolysin 363 38.18 0 374694..375209 - 171 108562787 - HPAG1_0362 - hypothetical protein 364 42.10 0 375276..376199 + 307 108562788 pyrB HPAG1_0363 - aspartate carbamoyltransferase catalytic subunit 365 42.22 0 376496..377935 + 479 108562789 - HPAG1_0364 - outer membrane protein HofB 366 38.89 0 378026..379681 + 551 108562790 - HPAG1_0365 - multidrug resistance protein 367 37.66 0 379675..380298 + 207 108562791 - HPAG1_0366 - hypothetical protein 368 38.42 0 380302..380871 + 189 108562792 - HPAG1_0367 - hypothetical protein 369 30.64 -2 381004..382116 + 370 108562793 - HPAG1_0368 - hypothetical protein 370 25.73 -2 382139..382822 + 227 108562794 - HPAG1_0369 - hypothetical protein 371 41.57 0 382880..383875 + 331 108562795 - HPAG1_0370 - high affinity nickel transport protein 372 36.21 0 383879..384400 - 173 108562796 - HPAG1_0371 - hypothetical protein 373 40.02 0 384536..385852 + 438 108562797 - HPAG1_0372 - hypothetical protein 374 36.48 0 386024..386404 - 126 108562798 - HPAG1_0373 - hypothetical protein 375 40.30 0 386503..386703 - 66 108562799 - HPAG1_0374 - copper ion binding protein 376 39.77 0 386704..388941 - 745 108562800 - HPAG1_0375 - copper-transporting ATPase 377 39.78 0 388938..389651 - 237 108562801 - HPAG1_0376 - phosphatidylserine synthase 378 29.02 -2 389641..389895 - 84 108562802 - HPAG1_0377 - hypothetical protein 379 43.65 +1 389898..391796 - 632 108562803 - HPAG1_0378 - cell division protein 380 37.37 0 391805..392794 - 329 108562804 prmA HPAG1_0379 - ribosomal protein L11 methyltransferase 381 41.07 0 392795..393169 - 124 108562805 - HPAG1_0380 - chemotaxis protein 382 36.82 0 393464..394066 + 200 108562806 - HPAG1_0381 - outer membrane protein HorD 383 35.29 -1 394198..394605 - 135 108562807 - HPAG1_0382 - hypothetical protein 384 40.69 0 394608..394838 - 76 108562808 - HPAG1_0383 - hypothetical protein 385 35.20 -1 394832..395368 - 178 108562809 gidB HPAG1_0384 - glucose-inhibited division protein B 386 38.44 0 395365..396402 - 345 108562810 queA HPAG1_0385 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 387 40.11 0 396403..397125 - 240 108562811 - HPAG1_0386 - hypothetical protein 388 35.61 -1 397118..397600 - 160 108562812 - HPAG1_0387 - sec-independent translocase 389 41.84 0 397668..398678 - 336 108562813 ruvB HPAG1_0388 - Holliday junction DNA helicase B 390 41.82 0 398679..399491 - 270 108562814 panB HPAG1_0389 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 391 38.73 0 399640..400362 + 240 108562815 - HPAG1_0390 - hypothetical protein 392 36.55 0 400340..401209 + 289 108562816 - HPAG1_0391 - hypothetical protein 393 36.36 0 401239..402162 + 307 108562817 - HPAG1_0392 - hypothetical protein 394 37.11 0 402172..403494 + 440 108562818 - HPAG1_0393 - hypothetical protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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