version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 227 40.37 0 229886..230965 + 359 108562651 - HPAG1_0226 - bifunctional methionine sulfoxide reductase A/B protein 228 34.78 -1 231156..231362 + 68 108562652 - HPAG1_0227 - hypothetical protein 229 43.88 +1 231339..232172 - 277 108562653 - HPAG1_0228 - hypothetical protein 230 34.85 -1 232385..232450 - 21 108562654 - HPAG1_0229 - remnant of HopM 231 44.01 +1 232492..234468 - 658 108562655 - HPAG1_0230 - outer membrane protein HopM 232 41.62 0 234724..235881 + 385 108562656 - HPAG1_0231 - hypothetical protein 233 41.68 0 236130..237590 - 486 108562657 - HPAG1_0232 - outer membrane protein HopA 234 39.62 0 237786..238517 - 243 108562658 - HPAG1_0233 - 3-deoxy-manno-octulosonate cytidylyltransferase 235 39.97 0 238630..239427 + 265 108562659 - HPAG1_0234 - hypothetical protein 236 46.54 +2 239443..240093 + 216 108562660 - HPAG1_0235 - hypothetical protein 237 39.98 0 240115..241287 + 390 108562661 - HPAG1_0236 - hypothetical protein 238 39.74 0 241287..241817 + 176 108562662 - HPAG1_0237 - hypothetical protein 239 41.01 0 242589..243656 - 355 108562663 - HPAG1_0238 - cysteine-rich protein E 240 37.98 0 243750..244115 - 121 108562664 - HPAG1_0239 - hypothetical protein 241 42.89 +1 244115..245035 - 306 108562665 hemC HPAG1_0240 - porphobilinogen deaminase 242 40.54 0 245046..246779 - 577 108562666 - HPAG1_0241 - prolyl-tRNA synthetase 243 38.15 0 246783..248132 - 449 108562667 hemA HPAG1_0242 - glutamyl-tRNA reductase 244 36.36 0 248132..249055 - 307 108562668 - HPAG1_0243 - putative octaprenyl-diphosphate synthase 245 34.83 -1 249065..249466 - 133 108562669 - HPAG1_0244 - hypothetical protein 246 37.84 0 249453..249785 - 110 108562670 - HPAG1_0245 - hypothetical protein 247 37.90 0 249758..250195 - 145 108562671 - HPAG1_0246 - neutrophil activating protein 248 36.47 0 250398..251543 - 381 108562672 - HPAG1_0247 - histidine kinase sensor protein 249 35.22 -1 251540..251857 - 105 108562673 - HPAG1_0248 - hypothetical protein 250 41.98 0 251854..252882 - 342 108562674 flgI HPAG1_0249 - flagellar basal body P-ring protein 251 43.41 +1 253067..254545 + 492 108562675 - HPAG1_0250 - ATP-dependent RNA helicase 252 44.17 +1 254566..255654 + 362 108562676 - HPAG1_0251 - hypothetical protein 253 36.67 0 255661..256200 + 179 108562677 - HPAG1_0252 - hypothetical protein 254 40.43 0 256252..257802 - 516 108562678 - HPAG1_0253 - oligopeptide permease ATPase protein 255 42.72 0 257812..258834 - 340 108562679 - HPAG1_0254 - oligopeptide permease integral membrane protein 256 42.11 0 259164..260621 + 485 108562680 - HPAG1_0255 - outer membrane protein HopF 257 41.77 0 260631..262052 + 473 108562681 - HPAG1_0256 - outer membrane protein HopG 258 44.50 +1 262151..263386 + 411 108562682 - HPAG1_0257 - adenylosuccinate synthetase 259 35.43 -1 263383..263811 + 142 108562683 - HPAG1_0258 - hypothetical protein 260 39.88 0 263804..264475 + 223 108562684 - HPAG1_0259 - hypothetical protein 261 40.25 0 264472..265527 + 351 108562685 - HPAG1_0260 - hypothetical protein 262 40.30 0 265540..266802 + 420 108562686 xseA HPAG1_0261 - exodeoxyribonuclease VII large subunit 263 30.69 -2 266821..267993 - 390 108562687 - HPAG1_0262 - type III adenine methyltransferase 264 30.94 -2 267986..268444 - 152 108562688 - HPAG1_0263 - hypothetical protein 265 34.17 -1 268586..269185 + 199 108562689 - HPAG1_0264 - hypothetical protein 266 39.53 0 269297..270055 + 252 108562690 - HPAG1_0265 - type II DNA modification enzyme 267 40.88 0 270128..272698 + 856 108562691 - HPAG1_0266 - ATP-dependent protease binding subunit/heat shock protein 268 39.28 0 272753..273475 + 240 108562692 - HPAG1_0267 - cytochrome c biogenesis protein 269 37.99 0 273485..274621 + 378 108562693 - HPAG1_0268 - dihydroorotase 270 39.84 0 274606..275835 + 409 108562694 - HPAG1_0269 - chlorohydrolase 271 37.45 0 275896..276138 + 80 108562695 - HPAG1_0270 - hypothetical protein 272 42.54 0 276148..277461 + 437 108562696 - HPAG1_0271 - putative ATP-binding protein 273 41.90 0 277500..278153 + 217 108562697 - HPAG1_0272 - hypothetical protein 274 35.57 -1 278146..279129 + 327 108562698 - HPAG1_0273 - hypothetical protein 275 36.52 0 279119..279652 + 177 108562699 - HPAG1_0274 - hypothetical protein 276 35.56 -1 279649..280188 + 179 108562700 - HPAG1_0275 - hypothetical protein 277 38.06 0 280201..280602 + 133 108562701 - HPAG1_0276 - hypothetical protein 278 37.28 0 280639..281931 + 430 108562702 - HPAG1_0277 - ATP-dependent nuclease 279 38.10 0 281919..282464 + 181 108562703 - HPAG1_0278 - hypothetical protein 280 42.06 0 282535..282786 + 83 108562704 - HPAG1_0279 - ferrodoxin 281 41.72 0 282796..284250 + 484 108562705 - HPAG1_0280 - guanosine pentaphosphate phosphohydrolase 282 37.15 0 284247..285269 + 340 108562706 - HPAG1_0281 - lipopolysaccharide heptosyltransferase-1 283 39.82 0 285266..286252 + 328 108562707 - HPAG1_0282 - lipid A biosynthesis lauroyl acyltransferase 284 43.82 +1 286351..287466 - 371 108562708 tgt HPAG1_0283 - queuine tRNA-ribosyltransferase 285 37.56 0 287517..288959 + 480 108562709 - HPAG1_0284 - hypothetical protein 286 37.21 0 288964..289995 + 343 108562710 aroB HPAG1_0285 - 3-dehydroquinate synthase 287 36.77 0 289986..291557 + 523 108562711 - HPAG1_0286 - hypothetical protein 288 39.30 0 291554..292810 + 418 108562712 - HPAG1_0287 - hypothetical protein 289 39.14 0 292797..294449 + 550 108562713 - HPAG1_0288 - cell division protein 290 35.84 0 294452..294970 + 172 108562714 - HPAG1_0289 - hypothetical protein 291 41.35 0 294983..295456 + 157 108562715 - HPAG1_0290 - hypothetical protein 292 41.16 0 295524..304220 + 2898 108562716 - HPAG1_0291 - putative vacuolating cytotoxin (VacA)-like protein 293 41.54 0 304268..305485 + 405 108562717 - HPAG1_0292 - diaminopimelate decarboxylase 294 32.30 -1 305490..305780 + 96 108562718 - HPAG1_0293 - hypothetical protein 295 36.08 0 305793..306665 + 290 108562719 - HPAG1_0294 - hypothetical protein 296 36.67 0 306666..308345 + 559 108562720 - HPAG1_0295 - para-aminobenzoate synthetase 297 44.90 +1 308534..309553 + 339 108562721 amiE HPAG1_0296 - acylamide amidohydrolase 298 39.61 0 309635..312121 - 828 108562722 flgL HPAG1_0297 - flagellar hook-associated protein FlgL 299 40.95 0 312354..312668 + 104 108562723 rplU HPAG1_0298 - 50S ribosomal protein L21 300 44.57 +1 312683..312949 + 88 108562724 rpmA HPAG1_0299 - 50S ribosomal protein L27 301 41.58 0 313066..314715 + 549 108562725 - HPAG1_0300 - periplasmic dipeptide-binding protein 302 44.98 +1 314726..315730 + 334 108562726 - HPAG1_0301 - dipeptide permease protein 303 46.50 +2 315730..316587 + 285 108562727 - HPAG1_0302 - dipeptide permease protein 304 42.36 0 316599..317462 + 287 108562728 - HPAG1_0303 - dipeptide ABC transporter 305 42.13 0 317459..318265 + 268 108562729 - HPAG1_0304 - dipeptide ABC transporter 306 44.41 +1 318284..319366 + 360 108562730 obgE HPAG1_0305 - GTPase ObgE 307 41.97 0 319408..320403 + 331 108562731 - HPAG1_0306 - hypothetical protein 308 38.38 0 320649..321203 + 184 108562732 - HPAG1_0307 - hypothetical protein 309 43.70 +1 321213..322505 + 430 108562733 - HPAG1_0308 - glutamate-1-semialdehyde aminotransferase 310 37.12 0 322510..322773 + 87 108562734 - HPAG1_0309 - hypothetical protein 311 36.54 0 322789..323193 + 134 108562735 - HPAG1_0310 - hypothetical protein 312 41.52 0 323277..324155 + 292 108562736 - HPAG1_0311 - hypothetical protein 313 45.12 +1 324168..325049 + 293 108562737 - HPAG1_0312 - hypothetical protein 314 31.89 -2 325103..325795 - 230 108562738 - HPAG1_0313 - type II restriction enzyme 315 35.86 0 325806..326915 - 369 108562739 - HPAG1_0314 - DNA methylase 316 42.12 0 327010..327396 + 128 108562740 - HPAG1_0315 - hypothetical protein 317 41.72 0 327396..328361 + 321 108562741 - HPAG1_0316 - ATP/GTP binding protein 318 41.10 0 328367..329512 - 381 108562742 - HPAG1_0317 - nitrite extrusion protein 319 31.78 -2 330274..330531 - 85 108562743 - HPAG1_0318 - hypothetical protein 320 31.78 -2 330524..330652 - 42 108562744 - HPAG1_0319 - hypothetical protein 321 43.31 +1 331459..333582 - 707 108562745 - HPAG1_0320 - outer membrane protein 322 40.48 0 333867..334622 - 251 108562746 - HPAG1_0321 - hypothetical protein 323 38.07 0 334685..336310 - 541 108562747 argS HPAG1_0322 - arginyl-tRNA synthetase 324 39.58 0 336313..336552 - 79 108562748 - HPAG1_0323 - sec-independent protein translocase protein 325 38.33 0 336623..337243 - 206 108562749 gmk HPAG1_0324 - guanylate kinase 326 38.18 0 337236..338660 - 474 108562750 - HPAG1_0325 - poly E-rich protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0