version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 118 39.81 0 124209..125135 + 308 108562542 - HPAG1_0117 - hypothetical protein 119 33.33 -1 125275..126492 - 405 108562543 - HPAG1_0118 - hypothetical protein 120 34.47 -1 126777..128009 - 410 108562544 - HPAG1_0119 - hypothetical protein 121 42.15 0 128097..130535 - 812 108562545 - HPAG1_0120 - phosphoenolpyruvate synthase 122 39.86 0 130715..130852 + 45 108562546 - HPAG1_0121 - hypothetical protein 123 41.44 0 130909..132747 + 612 108562547 thrS HPAG1_0122 - threonyl-tRNA synthetase 124 37.75 0 132744..133355 + 203 108562548 infC HPAG1_0123 - translation initiation factor IF-3 125 41.54 0 133336..133530 + 64 108562549 rpmI HPAG1_0124 - 50S ribosomal protein L35 126 41.88 0 133624..133974 + 116 108562550 rplT HPAG1_0125 - 50S ribosomal protein L20 127 42.16 0 134174..135034 + 286 108562551 - HPAG1_0126 - outer membrane protein HorB 128 33.33 -1 135086..135211 + 41 108562552 - HPAG1_0127 - hypothetical protein 129 36.81 0 135378..135809 + 143 108562553 - HPAG1_0128 - hypothetical protein 130 39.14 0 136221..137081 + 286 108562554 - HPAG1_0129 - hypothetical protein 131 42.62 0 137683..139050 - 455 108562555 - HPAG1_0130 - L-serine deaminase 132 39.05 0 139050..140291 - 413 108562556 - HPAG1_0131 - L-serine transporter 133 44.30 +1 140473..141822 + 449 108562557 - HPAG1_0132 - tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 134 34.81 -1 142115..142249 + 44 108562558 - HPAG1_0133 - hypothetical protein 135 40.96 0 142480..142938 - 152 108562559 - HPAG1_0134 - bacterioferritin comigratory protein 136 38.99 0 142948..143583 - 211 108562560 - HPAG1_0135 - hypothetical protein 137 42.88 +1 143576..145021 - 481 108562561 - HPAG1_0136 - putative iron-sulfur protein 138 40.19 0 145051..145779 - 242 108562562 - HPAG1_0137 - hypothetical protein 139 43.70 +1 145999..147648 + 549 108562563 - HPAG1_0138 - L-lactate permease 140 42.51 0 147698..149353 + 551 108562564 - HPAG1_0139 - L-lactate permease 141 36.88 0 149377..150363 - 328 108562565 - HPAG1_0140 - A/G-specific adenine glycosylase 142 42.51 0 150364..151812 - 482 108562566 - HPAG1_0141 - C(4)-dicarboxylates and tricarboxylates/succinate antiporter 143 42.06 0 151982..153448 + 488 108562567 - HPAG1_0142 - cytochrome c oxidase heme b and copper-binding subunit 144 43.35 +1 153461..154159 + 232 108562568 - HPAG1_0143 - cytochrome c oxidase monoheme subunit 145 34.68 -1 154167..154388 + 73 108562569 - HPAG1_0144 - cytochrome c oxidase subunit Q 146 41.75 0 154390..155268 + 292 108562570 - HPAG1_0145 - cytochrome c oxidase diheme subunit 147 36.23 0 155279..155485 + 68 108562571 - HPAG1_0146 - hypothetical protein 148 38.12 0 155586..156170 + 194 108562572 - HPAG1_0147 - hypothetical protein 149 37.23 0 156183..156773 + 196 108562573 - HPAG1_0148 - hypothetical protein 150 36.46 0 156854..157621 + 255 108562574 - HPAG1_0149 - hypothetical protein 151 38.89 0 157618..158481 - 287 108562575 - HPAG1_0150 - hypothetical protein 152 43.87 +1 158580..159623 + 347 108562576 recA HPAG1_0151 - recombinase A 153 43.72 +1 159636..160916 + 426 108562577 eno HPAG1_0152 - phosphopyruvate hydratase 154 38.41 0 160909..161184 + 91 108562578 - HPAG1_0153 - hypothetical protein 155 37.81 0 161196..161798 + 200 108562579 - HPAG1_0154 - hypothetical protein 156 38.85 0 161803..162291 + 162 108562580 aroK HPAG1_0155 - shikimate kinase 157 40.75 0 162312..163268 + 318 108562581 - HPAG1_0156 - hypothetical protein 158 35.66 0 163265..164383 - 372 108562582 - HPAG1_0157 - lipopolysaccharide 1,2-glycosyltransferase 159 41.69 0 164535..165455 + 306 108562583 - HPAG1_0158 - cysteine-rich protein D 160 41.22 0 165996..166718 - 240 108562584 - HPAG1_0159 - hypothetical protein 161 39.40 0 166719..167690 - 323 108562585 - HPAG1_0160 - delta-aminolevulinic acid dehydratase 162 35.28 -1 167762..169045 - 427 108562586 - HPAG1_0161 - putative histidine kinase sensor protein 163 38.50 0 169071..169748 - 225 108562587 - HPAG1_0162 - response regulator 164 38.16 0 169980..170456 - 158 108562588 - HPAG1_0163 - hypothetical protein 165 33.33 -1 170435..170698 - 87 108562589 - HPAG1_0164 - hypothetical protein 166 42.00 0 170745..172013 - 422 108562590 - HPAG1_0165 - collagenase 167 41.67 0 172016..172747 - 243 108562591 - HPAG1_0166 - hypothetical protein 168 42.03 0 172822..173913 - 363 108562592 prfB HPAG1_0167 - peptide chain release factor 2 169 38.18 0 173974..175149 - 391 108562593 - HPAG1_0168 - molybdopterin biosynthesis protein 170 41.80 0 175159..175926 - 255 108562594 fliR HPAG1_0169 - flagellar biosynthesis protein FliR 171 31.55 -2 175920..176648 - 242 108562595 - HPAG1_0170 - hypothetical protein 172 39.44 0 177121..178020 + 299 108562596 - HPAG1_0171 - peptidyl-prolyl cis-trans isomerase C 173 43.29 +1 178037..178960 + 307 108562597 - HPAG1_0172 - fructose-bisphosphate aldolase 174 44.86 +1 178982..179545 + 187 108562598 - HPAG1_0173 - elongation factor P 175 35.93 0 180226..180495 + 89 108562599 - HPAG1_0174 - hypothetical protein 176 39.59 0 180487..181509 - 340 108562600 - HPAG1_0175 - sialic acid synthase 177 40.81 0 181513..182154 - 213 108562601 - HPAG1_0176 - ABC transporter 178 37.02 0 182154..183428 - 424 108562602 - HPAG1_0177 - apolipoprotein N-acyltransferase 179 38.60 0 183653..184354 + 233 108562603 - HPAG1_0178 - hypothetical protein 180 40.17 0 184364..185869 + 501 108562604 lysS HPAG1_0179 - lysyl-tRNA synthetase 181 40.85 0 185869..187119 + 416 108562605 glyA HPAG1_0180 - serine hydroxymethyltransferase 182 40.88 0 187130..187672 + 180 108562606 - HPAG1_0181 - hypothetical protein 183 38.40 0 187694..188503 + 269 108562607 - HPAG1_0182 - hypothetical protein 184 41.01 0 189275..189808 + 177 108562608 - HPAG1_0183 - hypothetical protein 185 38.17 0 189814..191322 - 502 108562609 - HPAG1_0184 - phospholipase D-family protein 186 44.04 +1 191344..192081 - 245 108562610 sdhB HPAG1_0185 - fumarate reductase iron-sulfur subunit 187 45.97 +1 192074..194218 - 714 108562611 - HPAG1_0186 - fumarate reductase flavoprotein subunit 188 40.10 0 194228..194995 - 255 108562612 - HPAG1_0187 - fumarate reductase cytochrome b-556 subunit 189 34.61 -1 195209..195913 + 234 108562613 tpiA HPAG1_0188 - triosephosphate isomerase 190 42.81 0 195923..196756 + 277 108562614 - HPAG1_0189 - enoyl-(acyl carrier protein) reductase 191 42.93 +1 196756..197766 + 336 108562615 lpxD HPAG1_0190 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 192 44.99 +1 197831..198988 + 385 108562616 - HPAG1_0191 - S-adenosylmethionine synthetase 193 42.51 0 199054..199467 + 137 108562617 - HPAG1_0192 - nucleoside diphosphate kinase 194 38.66 0 199492..199848 + 118 108562618 - HPAG1_0193 - hypothetical protein 195 42.86 +1 199864..200010 + 48 108562619 rpmF HPAG1_0194 - 50S ribosomal protein L32 196 43.21 +1 200076..201098 + 340 108562620 - HPAG1_0195 - putative glycerol-3-phosphate acyltransferase PlsX 197 43.20 +1 201123..202115 + 330 108562621 - HPAG1_0196 - 3-oxoacyl-(acyl carrier protein) synthase III 198 39.50 0 202082..202438 + 118 108562622 - HPAG1_0197 - hypothetical protein 199 39.06 0 203064..203447 - 127 108562623 - HPAG1_0198 - hypothetical protein 200 32.60 -1 203524..205164 - 546 108562624 - HPAG1_0199 - hypothetical protein 201 27.78 -2 205230..205787 - 185 108562625 - HPAG1_0200 - hypothetical protein 202 38.37 0 205999..207228 - 409 108562626 - HPAG1_0201 - putative transposase OrfB 203 33.97 -1 207215..207847 - 210 108562627 - HPAG1_0202 - putative transposase OrfA 204 36.92 0 207844..208038 - 64 108562628 - HPAG1_0203 - hypothetical protein 205 35.16 -1 208031..208249 - 72 108562629 - HPAG1_0204 - hypothetical protein 206 30.63 -2 208297..208962 - 221 108562630 - HPAG1_0205 - hypothetical protein 207 34.29 -1 208950..209054 - 34 108562632 - HPAG1_0206 - hypothetical protein 208 41.14 0 209040..210281 + 413 108562631 - HPAG1_0207 - ATP-binding protein 209 37.55 0 210295..211431 - 378 108562633 - HPAG1_0208 - lipopolysaccharide 1,2-glycosyltransferase 210 40.83 0 211362..211481 - 39 108562634 - HPAG1_0209 - lipopolysaccharide 1,2-glycosyltransferase 211 40.28 0 211636..212988 + 450 108562635 - HPAG1_0210 - outer membrane protein HofA 212 37.57 0 213091..214956 + 621 108562636 - HPAG1_0211 - heat shock protein 90 213 40.90 0 215289..216041 - 250 108562637 - HPAG1_0212 - cysteine-rich protein A 214 40.89 0 216501..217652 - 383 108562638 - HPAG1_0213 - succinyl-diaminopimelate desuccinylase 215 42.23 0 217662..219527 - 621 108562639 - HPAG1_0214 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 216 43.04 +1 219623..221281 + 552 108562640 - HPAG1_0215 - sodium-dependent transporter 217 43.07 +1 221294..222094 + 266 108562641 - HPAG1_0216 - CDP-diacylglycerol synthetase 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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