version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1412 42.84 0 1468158..1469324 + 388 108563836 - HPAG1_1411 - outer membrane protein HopK 1413 31.94 -2 1469402..1470982 - 526 108563837 - HPAG1_1412 - restriction endonuclease 1414 28.11 -2 1470989..1471888 - 299 108563838 - HPAG1_1413 - type II adenine specific DNA methyltransferase 1415 30.94 -2 1471885..1472886 - 333 108563839 - HPAG1_1414 - type II methylase 1416 37.27 0 1472943..1474010 - 355 108563840 - HPAG1_1415 - hypothetical protein 1417 37.61 0 1474065..1474625 - 186 108563841 - HPAG1_1416 - peptidyl-tRNA hydrolase 1418 38.36 0 1474635..1475171 - 178 108563842 - HPAG1_1417 - 50S ribosomal protein L25/general stress protein Ctc 1419 39.12 0 1475226..1476176 - 316 108563843 - HPAG1_1418 - transaldolase 1420 38.02 0 1476180..1477523 - 447 108563844 murE HPAG1_1419 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1421 35.78 0 1477527..1478138 - 203 108563845 - HPAG1_1420 - hypothetical protein 1422 36.67 0 1478150..1478419 - 89 108563846 - HPAG1_1421 - NifU-like protein 1423 43.26 +1 1478558..1480159 + 533 108563847 - HPAG1_1422 - phosphate permease 1424 42.53 0 1480267..1481604 + 445 108563848 - HPAG1_1423 - hemolysin domain-containing protein 1425 40.64 0 1481620..1483152 + 510 108563849 - HPAG1_1424 - lipase-like protein 1426 43.74 +1 1483164..1484153 + 329 108563850 - HPAG1_1425 - hypothetical protein 1427 40.80 0 1484165..1485262 + 365 108563851 - HPAG1_1426 - hypothetical protein 1428 39.26 0 1485259..1486389 + 376 108563852 - HPAG1_1427 - hypothetical protein 1429 39.97 0 1486376..1486948 + 190 108563853 - HPAG1_1428 - hypothetical protein 1430 38.26 0 1486959..1487405 + 148 108563854 - HPAG1_1429 - hypothetical protein 1431 40.30 0 1487432..1488163 + 243 108563855 ubiE HPAG1_1430 - ubiquinone/menaquinone biosynthesis methyltransferase 1432 37.55 0 1488173..1488433 + 86 108563856 - HPAG1_1431 - hypothetical protein 1433 40.85 0 1488437..1489234 + 265 108563857 - HPAG1_1432 - hypothetical protein 1434 41.67 0 1489235..1490482 + 415 108563858 - HPAG1_1433 - seryl-tRNA synthetase 1435 39.25 0 1490492..1493026 + 844 108563859 - HPAG1_1434 - hypothetical protein 1436 40.17 0 1493023..1495071 + 682 108563860 - HPAG1_1435 - DNA helicase II 1437 37.90 0 1495068..1495724 + 218 108563861 flgA HPAG1_1436 - flagellar basal body P-ring biosynthesis protein FlgA 1438 45.04 +1 1495734..1496297 + 187 108563862 - HPAG1_1437 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1439 41.56 0 1496297..1496770 + 157 108563863 coaD HPAG1_1438 - phosphopantetheine adenylyltransferase 1440 41.67 0 1496772..1497347 + 191 108563864 tdk HPAG1_1439 - thymidylate kinase 1441 39.41 0 1497335..1497910 + 191 108563865 - HPAG1_1440 - hypothetical protein 1442 37.05 0 1497943..1499154 + 403 108563866 - HPAG1_1441 - restriction enzyme BcgI alpha chain-like protein 1443 38.27 0 1499138..1499542 + 134 108563867 - HPAG1_1442 - restriction enzyme BcgI alpha chain-like protein 1444 39.16 0 1499554..1499982 + 142 108563868 - HPAG1_1443 - restriction enzyme BcgI alpha chain-like protein 1445 36.80 0 1499979..1501190 + 403 108563869 - HPAG1_1444 - type II restriction enzyme 1446 37.85 0 1501256..1503955 + 899 108563870 - HPAG1_1445 - DNA polymerase I 1447 42.57 0 1504070..1504816 + 248 108563871 - HPAG1_1446 - outer membrane protein HorJ 1448 44.48 +1 1504869..1505891 + 340 108563872 - HPAG1_1447 - branched-chain amino acid aminotransferase 1449 40.23 0 1505896..1506591 - 231 108563873 - HPAG1_1448 - outer membrane protein 1450 39.95 0 1506725..1507858 + 377 108563874 - HPAG1_1449 - hypothetical protein 1451 43.00 +1 1507858..1508643 + 261 108563875 - HPAG1_1450 - ABC transporter ATP-binding protein 1452 40.81 0 1508628..1509443 + 271 108563876 - HPAG1_1451 - ABC transport system substrate binding protein 1453 40.56 0 1509446..1510123 + 225 108563877 - HPAG1_1452 - hypothetical protein 1454 37.24 0 1510135..1510722 + 195 108563878 - HPAG1_1453 - putative secreted motility protein 1455 41.88 0 1511017..1512069 - 350 108563879 - HPAG1_1454 - cytochrome c551 peroxidase 1456 41.50 0 1512217..1515852 + 1211 108563880 dnaE HPAG1_1455 - DNA polymerase III subunit alpha 1457 41.83 0 1515834..1516622 + 262 108563881 - HPAG1_1456 - hypothetical protein 1458 40.32 0 1516678..1516992 + 104 108563882 - HPAG1_1457 - thioredoxin 1459 42.65 0 1517355..1517987 + 210 108563883 - HPAG1_1458 - hypothetical protein 1460 39.96 0 1518011..1518538 + 175 108563884 - HPAG1_1459 - membrane-associated lipoprotein 1461 40.06 0 1518546..1518887 + 113 108563885 - HPAG1_1460 - hypothetical protein 1462 38.60 0 1518896..1519807 + 303 108563886 - HPAG1_1461 - hypothetical protein 1463 31.47 -2 1520168..1521295 - 375 108563887 - HPAG1_1462 - type I R-M system specificity subunit 1464 32.69 -1 1521283..1522059 - 258 108563888 - HPAG1_1463 - hypothetical protein 1465 37.41 0 1522146..1524158 - 670 108563889 - HPAG1_1464 - type I restriction enzyme M protein 1466 42.58 0 1524194..1524604 - 136 108563890 - HPAG1_1465 - type I restriction enzyme M protein 1467 36.89 0 1524671..1527649 + 992 108563891 - HPAG1_1466 - type I restriction enzyme R protein 1468 38.10 0 1527649..1527879 + 76 108563892 - HPAG1_1467 - hypothetical protein 1469 34.44 -1 1527816..1528355 + 179 108563893 - HPAG1_1468 - hypothetical protein 1470 46.07 +1 1528454..1530982 - 842 108563894 - HPAG1_1469 - iron(III) dicitrate transport protein 1471 39.83 0 1531330..1532298 - 322 108563895 - HPAG1_1470 - arginase 1472 43.35 +1 1532311..1533738 - 475 108563896 - HPAG1_1471 - amino acid permease 1473 44.01 +1 1533938..1535080 + 380 108563897 - HPAG1_1472 - alanine dehydrogenase 1474 35.39 -1 1535201..1536754 + 517 108563898 - HPAG1_1473 - hypothetical protein 1475 34.39 -1 1536738..1536926 + 62 108563899 - HPAG1_1474 - hypothetical protein 1476 41.84 0 1536937..1537665 - 242 108563900 - HPAG1_1475 - outer membrane protein HorL 1477 40.94 0 1537852..1538706 + 284 108563901 - HPAG1_1476 - hypothetical protein 1478 39.24 0 1538719..1540293 + 524 108563902 - HPAG1_1477 - DNA repair protein 1479 32.34 -1 1540290..1541597 + 435 108563903 - HPAG1_1478 - fibronectin/fibrinogen-binding protein 1480 40.40 0 1541617..1541913 + 98 108563904 - HPAG1_1479 - hypothetical protein 1481 29.69 -2 1542044..1542400 + 118 108563905 - HPAG1_1480 - hypothetical protein 1482 39.71 0 1542646..1543617 - 323 108563906 - HPAG1_1481 - DNA polymerase III subunit epsilon 1483 42.05 0 1543487..1544140 - 217 108563907 - HPAG1_1482 - ribulose-phosphate 3-epimerase 1484 37.00 0 1544211..1545083 + 290 108563908 - HPAG1_1483 - fructose-1,6-bisphosphatase 1485 40.10 0 1545080..1545286 + 68 108563909 - HPAG1_1484 - hypothetical protein 1486 34.89 -1 1545299..1546195 + 298 108563910 - HPAG1_1485 - putative type II methylase protein 1487 34.29 -1 1546188..1546919 + 243 108563911 - HPAG1_1486 - hypothetical protein 1488 43.59 +1 1547040..1547897 - 285 108563912 - HPAG1_1487 - ubiquinol cytochrome c oxidoreductase, cytochrome c1 1489 43.18 +1 1547894..1549132 - 412 108563913 - HPAG1_1488 - ubiquinol cytochrome c oxidoreductase, cytochrome b subunit 1490 45.24 +1 1549143..1549646 - 167 108563914 - HPAG1_1489 - ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit 1491 40.13 0 1549770..1552769 - 999 108563915 - HPAG1_1490 - transcription-repair coupling factor 1492 43.80 +1 1552773..1553183 - 136 108563916 - HPAG1_1491 - hypothetical protein 1493 40.92 0 1553102..1554037 - 311 108563917 - HPAG1_1492 - toxR-activated gene 1494 38.94 0 1554046..1554972 - 308 108563918 - HPAG1_1493 - toxR-activated gene 1495 37.86 0 1554972..1556141 - 389 108563919 - HPAG1_1494 - folylpolyglutamate synthase 1496 39.38 0 1556131..1556643 - 170 108563920 - HPAG1_1495 - hypothetical protein 1497 40.48 0 1556640..1559060 - 806 108563921 leuS HPAG1_1496 - leucyl-tRNA synthetase 1498 43.07 +1 1559071..1559409 - 112 108563922 - HPAG1_1497 - hypothetical protein 1499 40.33 0 1559419..1560390 - 323 108563923 secF HPAG1_1498 - preprotein translocase subunit SecF 1500 43.54 +1 1560399..1561976 - 525 108563924 secD HPAG1_1499 - preprotein translocase subunit SecD 1501 38.78 0 1561977..1562270 - 97 108563925 yajC HPAG1_1500 - preprotein translocase subunit YajC 1502 42.07 0 1562318..1563634 - 438 108563926 - HPAG1_1501 - Na+/H+ antiporter 1503 37.63 0 1563658..1566519 - 953 108563927 - HPAG1_1502 - ATP-dependent nuclease 1504 38.99 0 1566769..1567563 + 264 108563928 rpsB HPAG1_1503 - 30S ribosomal protein S2 1505 40.82 0 1567563..1568630 + 355 108563929 tsf HPAG1_1504 - elongation factor Ts 1506 40.10 0 1569074..1570921 - 615 108563930 - HPAG1_1505 - cell division protein 1507 41.82 0 1571077..1571406 - 109 108563931 fliE HPAG1_1506 - flagellar hook-basal body protein FliE 1508 44.44 +1 1571534..1572019 - 161 108563932 flgC HPAG1_1507 - flagellar basal body rod protein FlgC 1509 38.77 0 1572033..1572455 - 140 108563933 flgB HPAG1_1508 - flagellar basal body rod protein FlgB 1510 44.99 +1 1572660..1573826 + 388 108563934 - HPAG1_1509 - cell division protein 1511 40.08 0 1573851..1574858 - 335 108563935 - HPAG1_1510 - iron(III) ABC transporter, periplasmic iron-binding protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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