version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1353 52.46 +2 1403707..1403889 - 60 108563777 - HPAG1_1352 - histidine-rich metal binding polypeptide 1354 38.18 0 1404085..1405158 - 357 108563778 - HPAG1_1353 - hypothetical protein 1355 42.73 0 1405155..1406144 - 329 108563779 - HPAG1_1354 - polysialic acid capsule expression protein 1356 43.64 +1 1406128..1408203 - 691 108563780 - HPAG1_1355 - ATP/GTP binding protein 1357 39.34 0 1408241..1409056 - 271 108563781 ksgA HPAG1_1356 - dimethyladenosine transferase 1358 47.42 +2 1409310..1409522 + 70 108563782 - HPAG1_1357 - histidine and glutamine-rich metal binding protein 1359 36.56 0 1409851..1409943 + 30 108563783 - HPAG1_1358 - hypothetical protein 1360 35.79 0 1410157..1412718 - 853 108563784 - HPAG1_1359 - hypothetical protein 1361 38.89 0 1412719..1413600 - 293 108563785 - HPAG1_1360 - formyltetrahydrofolate hydrolase 1362 41.52 0 1413603..1414481 - 292 108563786 - HPAG1_1361 - signal peptide protease IV 1363 38.31 0 1414553..1414813 + 86 108563787 - HPAG1_1362 - hypothetical protein 1364 30.59 -2 1415052..1415780 + 242 108563788 - HPAG1_1363 - hypothetical protein 1365 32.80 -1 1415832..1416953 + 373 108563789 - HPAG1_1364 - lipoprotein 1366 37.56 0 1416979..1417404 + 141 108563790 - HPAG1_1365 - hypothetical protein 1367 38.93 0 1419927..1420712 - 261 108563791 - HPAG1_1366 - hypothetical protein 1368 45.53 +1 1420827..1421318 + 163 108563792 - HPAG1_1367 - peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase 1369 41.56 0 1421337..1421567 + 76 108563793 - HPAG1_1368 - carbon storage regulator 1370 38.42 0 1421564..1422388 + 274 108563794 - HPAG1_1369 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1371 32.46 -1 1422366..1422824 + 152 108563795 smpB HPAG1_1370 - SsrA-binding protein 1372 41.28 0 1422827..1423279 + 150 108563796 - HPAG1_1371 - biopolymer transport protein 1373 35.32 -1 1423290..1423691 + 133 108563797 - HPAG1_1372 - biopolymer transport protein 1374 45.19 +1 1423763..1423897 + 44 108563798 rpmH HPAG1_1373 - 50S ribosomal protein L34 1375 35.93 0 1423857..1424357 + 166 108563799 - HPAG1_1374 - ribonuclease P, protein component 1376 42.58 0 1424330..1424686 + 118 108563800 - HPAG1_1375 - hypothetical protein 1377 40.01 0 1424692..1426338 + 548 108563801 - HPAG1_1376 - putative inner membrane protein translocase component YidC 1378 36.93 0 1426338..1427144 + 268 108563802 - HPAG1_1377 - hypothetical protein 1379 39.47 0 1427104..1428489 + 461 108563803 trmE HPAG1_1378 - tRNA modification GTPase TrmE 1380 42.66 0 1428703..1430943 + 746 108563804 - HPAG1_1379 - outer membrane protein HomD 1381 23.13 -2 1431072..1431218 - 48 108563805 - HPAG1_1380 - hypothetical protein 1382 27.38 -2 1431375..1431626 + 83 108563806 - HPAG1_1381 - MobC-like protein 1383 36.72 0 1431707..1432237 + 176 108563807 - HPAG1_1382 - cagY like protein 1384 38.92 0 1432271..1432897 - 208 108563808 thyX HPAG1_1383 - FAD-dependent thymidylate synthase 1385 40.86 0 1432919..1434712 - 597 108563809 - HPAG1_1384 - D-fructose-6-phosphate amidotransferase 1386 33.75 -1 1434713..1434952 - 79 108563810 - HPAG1_1385 - hypothetical protein 1387 38.49 0 1434995..1435537 - 180 108563811 - HPAG1_1386 - purine nucleoside phosphorylase 1388 39.91 0 1435690..1437057 + 455 108563812 dnaA HPAG1_1387 - chromosomal replication initiation protein 1389 40.00 0 1437278..1438717 + 479 108563813 - HPAG1_1388 - hypothetical protein 1390 37.72 0 1438897..1439649 + 250 108563814 - HPAG1_1389 - exodeoxyribonuclease 1391 39.15 0 1439646..1440281 - 211 108563815 - HPAG1_1390 - hypothetical protein 1392 35.06 -1 1440285..1440632 - 115 108563816 - HPAG1_1391 - hypothetical protein 1393 38.25 0 1440714..1442585 + 623 108563817 - HPAG1_1392 - DNA recombinase 1394 33.84 -1 1442641..1444605 + 654 108563818 - HPAG1_1393 - type III R-M system modification enzyme 1395 36.33 0 1444608..1447508 + 966 108563819 - HPAG1_1394 - type III R-M system restriction enzyme 1396 37.43 0 1447627..1451385 + 1252 108563820 - HPAG1_1395 - type IIS restriction-modification protein 1397 29.03 -2 1451445..1451537 - 30 108563821 - HPAG1_1396 - hypothetical protein 1398 32.02 -1 1451939..1452622 - 227 108563822 - HPAG1_1397 - hypothetical protein 1399 39.90 0 1452679..1453866 - 395 108563823 nusA HPAG1_1398 - transcription elongation factor NusA 1400 37.64 0 1453968..1455128 - 386 108563824 - HPAG1_1399 - selenocysteine synthase 1401 44.91 +1 1455355..1457946 - 863 108563825 - HPAG1_1400 - iron-regulated outer membrane protein 1402 38.84 0 1458099..1458425 - 108 108563826 - HPAG1_1401 - hypothetical protein 1403 35.59 -1 1458409..1458762 - 117 108563827 - HPAG1_1402 - dihydroneopterin aldolase 1404 39.29 0 1458759..1459547 - 262 108563829 - HPAG1_1403 - putative glycerol-3-phosphate acyltransferase PlsY 1405 41.18 0 1459527..1460903 + 458 108563828 - HPAG1_1404 - ferrodoxin-like protein 1406 42.08 0 1460913..1462112 - 399 108563830 - HPAG1_1405 - hypothetical protein 1407 43.68 +1 1462198..1463424 + 408 108563831 - HPAG1_1406 - sodium/glutamate symport carrier protein/glutamate permease 1408 39.52 0 1463421..1464455 + 344 108563832 - HPAG1_1407 - riboflavin biosynthesis protein 1409 39.89 0 1464437..1465153 + 238 108563833 - HPAG1_1408 - hypothetical protein 1410 39.80 0 1465178..1467544 + 788 108563834 - HPAG1_1409 - putative cation transporting P-type ATPase 1411 37.44 0 1467541..1467978 - 145 108563835 - HPAG1_1410 - hypothetical protein 1412 42.84 0 1468158..1469324 + 388 108563836 - HPAG1_1411 - outer membrane protein HopK 1413 31.94 -2 1469402..1470982 - 526 108563837 - HPAG1_1412 - restriction endonuclease 1414 28.11 -2 1470989..1471888 - 299 108563838 - HPAG1_1413 - type II adenine specific DNA methyltransferase 1415 30.94 -2 1471885..1472886 - 333 108563839 - HPAG1_1414 - type II methylase 1416 37.27 0 1472943..1474010 - 355 108563840 - HPAG1_1415 - hypothetical protein 1417 37.61 0 1474065..1474625 - 186 108563841 - HPAG1_1416 - peptidyl-tRNA hydrolase 1418 38.36 0 1474635..1475171 - 178 108563842 - HPAG1_1417 - 50S ribosomal protein L25/general stress protein Ctc 1419 39.12 0 1475226..1476176 - 316 108563843 - HPAG1_1418 - transaldolase 1420 38.02 0 1476180..1477523 - 447 108563844 murE HPAG1_1419 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 1421 35.78 0 1477527..1478138 - 203 108563845 - HPAG1_1420 - hypothetical protein 1422 36.67 0 1478150..1478419 - 89 108563846 - HPAG1_1421 - NifU-like protein 1423 43.26 +1 1478558..1480159 + 533 108563847 - HPAG1_1422 - phosphate permease 1424 42.53 0 1480267..1481604 + 445 108563848 - HPAG1_1423 - hemolysin domain-containing protein 1425 40.64 0 1481620..1483152 + 510 108563849 - HPAG1_1424 - lipase-like protein 1426 43.74 +1 1483164..1484153 + 329 108563850 - HPAG1_1425 - hypothetical protein 1427 40.80 0 1484165..1485262 + 365 108563851 - HPAG1_1426 - hypothetical protein 1428 39.26 0 1485259..1486389 + 376 108563852 - HPAG1_1427 - hypothetical protein 1429 39.97 0 1486376..1486948 + 190 108563853 - HPAG1_1428 - hypothetical protein 1430 38.26 0 1486959..1487405 + 148 108563854 - HPAG1_1429 - hypothetical protein 1431 40.30 0 1487432..1488163 + 243 108563855 ubiE HPAG1_1430 - ubiquinone/menaquinone biosynthesis methyltransferase 1432 37.55 0 1488173..1488433 + 86 108563856 - HPAG1_1431 - hypothetical protein 1433 40.85 0 1488437..1489234 + 265 108563857 - HPAG1_1432 - hypothetical protein 1434 41.67 0 1489235..1490482 + 415 108563858 - HPAG1_1433 - seryl-tRNA synthetase 1435 39.25 0 1490492..1493026 + 844 108563859 - HPAG1_1434 - hypothetical protein 1436 40.17 0 1493023..1495071 + 682 108563860 - HPAG1_1435 - DNA helicase II 1437 37.90 0 1495068..1495724 + 218 108563861 flgA HPAG1_1436 - flagellar basal body P-ring biosynthesis protein FlgA 1438 45.04 +1 1495734..1496297 + 187 108563862 - HPAG1_1437 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1439 41.56 0 1496297..1496770 + 157 108563863 coaD HPAG1_1438 - phosphopantetheine adenylyltransferase 1440 41.67 0 1496772..1497347 + 191 108563864 tdk HPAG1_1439 - thymidylate kinase 1441 39.41 0 1497335..1497910 + 191 108563865 - HPAG1_1440 - hypothetical protein 1442 37.05 0 1497943..1499154 + 403 108563866 - HPAG1_1441 - restriction enzyme BcgI alpha chain-like protein 1443 38.27 0 1499138..1499542 + 134 108563867 - HPAG1_1442 - restriction enzyme BcgI alpha chain-like protein 1444 39.16 0 1499554..1499982 + 142 108563868 - HPAG1_1443 - restriction enzyme BcgI alpha chain-like protein 1445 36.80 0 1499979..1501190 + 403 108563869 - HPAG1_1444 - type II restriction enzyme 1446 37.85 0 1501256..1503955 + 899 108563870 - HPAG1_1445 - DNA polymerase I 1447 42.57 0 1504070..1504816 + 248 108563871 - HPAG1_1446 - outer membrane protein HorJ 1448 44.48 +1 1504869..1505891 + 340 108563872 - HPAG1_1447 - branched-chain amino acid aminotransferase 1449 40.23 0 1505896..1506591 - 231 108563873 - HPAG1_1448 - outer membrane protein 1450 39.95 0 1506725..1507858 + 377 108563874 - HPAG1_1449 - hypothetical protein 1451 43.00 +1 1507858..1508643 + 261 108563875 - HPAG1_1450 - ABC transporter ATP-binding protein 1452 40.81 0 1508628..1509443 + 271 108563876 - HPAG1_1451 - ABC transport system substrate binding protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0