version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1301 33.89 -1 1344372..1345451 - 359 108563725 - HPAG1_1300 - adenine specific DNA methyltransferase 1302 38.88 0 1345571..1349176 - 1201 108563726 - HPAG1_1301 - adenine specific DNA methyltransferase 1303 41.24 0 1349202..1350023 - 273 108563727 - HPAG1_1302 - nicotinate-nucleotide pyrophosphorylase 1304 40.55 0 1350023..1351033 - 336 108563728 - HPAG1_1303 - quinolinate synthetase 1305 39.43 0 1351023..1351826 - 267 108563729 - HPAG1_1304 - phosphatidylserine decarboxylase 1306 35.11 -1 1351820..1352326 - 168 108563730 - HPAG1_1305 - hypothetical protein 1307 37.32 0 1352339..1352890 - 183 108563731 - HPAG1_1306 - hypothetical protein 1308 41.24 0 1352826..1353710 - 294 108563732 ubiA HPAG1_1307 - prenyltransferase 1309 37.21 0 1353739..1355052 - 437 108563733 - HPAG1_1308 - competence locus E 1310 41.45 0 1355049..1356515 - 488 108563734 - HPAG1_1309 - replicative DNA helicase 1311 42.44 0 1356526..1357920 - 464 108563735 - HPAG1_1310 - hypothetical protein 1312 37.71 0 1357923..1359041 - 372 108563736 - HPAG1_1311 - putative histidine kinase sensor protein 1313 38.16 0 1359091..1359732 - 213 108563737 - HPAG1_1312 - response regulator 1314 33.54 -1 1359803..1361227 + 474 108563738 - HPAG1_1313 - type III restriction enzyme M protein 1315 37.68 0 1361166..1362269 + 367 108563739 - HPAG1_1314 - adenine-specific DNA methylase 1316 34.97 -1 1362280..1364655 + 791 108563740 - HPAG1_1315 - type III restriction enzyme R protein 1317 34.94 -1 1364755..1365189 + 144 108563741 - HPAG1_1316 - type III restriction enzyme R protein 1318 37.88 0 1365241..1365987 - 248 108563742 - HPAG1_1317 - rod shape-determining protein 1319 47.03 +2 1365991..1367034 - 347 108563743 - HPAG1_1318 - rod shape-determining protein 1320 42.10 0 1367077..1368000 - 307 108563744 clpX HPAG1_1319 - ATP-dependent protease ATP-binding subunit 1321 39.66 0 1368012..1368422 - 136 108563745 - HPAG1_1320 - ATP-dependent protease ATPase subunit 1322 42.68 0 1368424..1369236 - 270 108563746 - HPAG1_1321 - UDP-N-acetylglucosamine acyltransferase 1323 41.04 0 1369239..1369718 - 159 108563747 fabZ HPAG1_1322 - (3R)-hydroxymyristoyl-ACP dehydratase 1324 38.97 0 1369900..1370289 - 129 161984736 - HPAG1_1323 - flagellar assembly protein FliW 1325 37.25 0 1370709..1371371 + 220 108563749 - HPAG1_1324 - competence lipoprotein 1326 41.08 0 1371413..1373917 + 834 108563750 - HPAG1_1325 - ATP-dependent protease 1327 42.02 0 1373914..1374753 + 279 108563751 - HPAG1_1326 - prephenate dehydrogenase 1328 37.62 0 1374956..1375819 - 287 108563752 - HPAG1_1327 - putative endonuclease G 1329 33.33 -1 1375931..1377640 - 569 108563753 - HPAG1_1328 - putative type III restriction enzyme M protein 1330 34.67 -1 1377643..1380255 - 870 108563754 - HPAG1_1329 - putative type III restriction enzyme R protein 1331 43.11 +1 1380386..1381234 + 282 108563755 - HPAG1_1330 - biotin synthase 1332 37.32 0 1381234..1382112 + 292 108563756 - HPAG1_1331 - putative ribonuclease N 1333 22.86 -2 1382139..1382348 - 69 108563757 - HPAG1_1332 - hypothetical protein 1334 31.15 -2 1382436..1382618 - 60 108563758 - HPAG1_1333 - hypothetical protein 1335 29.96 -2 1386644..1386910 + 88 108563759 - HPAG1_1334 - hypothetical protein 1336 42.86 +1 1387305..1387745 + 146 108563760 - HPAG1_1335 - hypothetical protein 1337 37.32 0 1387792..1389624 + 610 108563761 - HPAG1_1336 - hypothetical protein 1338 35.37 -1 1389775..1390020 + 81 108563762 - HPAG1_1337 - hypothetical protein 1339 39.75 0 1389968..1390684 + 238 108563763 - HPAG1_1338 - hypothetical protein 1340 39.60 0 1390802..1391248 - 148 108563764 - HPAG1_1339 - 7-cyano-7-deazaguanine reductase 1341 38.01 0 1391308..1391649 + 113 108563765 - HPAG1_1340 - hypothetical protein 1342 39.59 0 1391720..1392550 + 276 108563766 miaA HPAG1_1341 - tRNA delta(2)-isopentenylpyrophosphate transferase 1343 37.95 0 1392555..1393658 + 367 108563767 - HPAG1_1342 - lipopolysaccharide 1,2-glucosyltransferase 1344 36.53 0 1393668..1395293 + 541 108563768 - HPAG1_1343 - hypothetical protein 1345 42.31 0 1395353..1396132 - 259 108563769 murB HPAG1_1344 - UDP-N-acetylenolpyruvoylglucosamine reductase 1346 40.45 0 1396136..1396402 - 88 108563770 fliQ HPAG1_1345 - flagellar biosynthesis protein FliQ 1347 45.59 +1 1396413..1397717 - 434 108563771 fliI HPAG1_1346 - flagellum-specific ATP synthase 1348 43.50 +1 1397718..1398632 - 304 108563772 - HPAG1_1347 - type IV secretion system ATPase 1349 40.17 0 1398649..1401411 - 920 108563773 ileS HPAG1_1348 - isoleucyl-tRNA synthetase 1350 40.70 0 1401435..1401692 - 85 108563774 - HPAG1_1349 - hypothetical protein 1351 42.51 0 1401794..1402414 + 206 108563775 - HPAG1_1350 - hypothetical protein 1352 38.32 0 1402541..1403422 - 293 108563776 - HPAG1_1351 - hypothetical protein 1353 52.46 +2 1403707..1403889 - 60 108563777 - HPAG1_1352 - histidine-rich metal binding polypeptide 1354 38.18 0 1404085..1405158 - 357 108563778 - HPAG1_1353 - hypothetical protein 1355 42.73 0 1405155..1406144 - 329 108563779 - HPAG1_1354 - polysialic acid capsule expression protein 1356 43.64 +1 1406128..1408203 - 691 108563780 - HPAG1_1355 - ATP/GTP binding protein 1357 39.34 0 1408241..1409056 - 271 108563781 ksgA HPAG1_1356 - dimethyladenosine transferase 1358 47.42 +2 1409310..1409522 + 70 108563782 - HPAG1_1357 - histidine and glutamine-rich metal binding protein 1359 36.56 0 1409851..1409943 + 30 108563783 - HPAG1_1358 - hypothetical protein 1360 35.79 0 1410157..1412718 - 853 108563784 - HPAG1_1359 - hypothetical protein 1361 38.89 0 1412719..1413600 - 293 108563785 - HPAG1_1360 - formyltetrahydrofolate hydrolase 1362 41.52 0 1413603..1414481 - 292 108563786 - HPAG1_1361 - signal peptide protease IV 1363 38.31 0 1414553..1414813 + 86 108563787 - HPAG1_1362 - hypothetical protein 1364 30.59 -2 1415052..1415780 + 242 108563788 - HPAG1_1363 - hypothetical protein 1365 32.80 -1 1415832..1416953 + 373 108563789 - HPAG1_1364 - lipoprotein 1366 37.56 0 1416979..1417404 + 141 108563790 - HPAG1_1365 - hypothetical protein 1367 38.93 0 1419927..1420712 - 261 108563791 - HPAG1_1366 - hypothetical protein 1368 45.53 +1 1420827..1421318 + 163 108563792 - HPAG1_1367 - peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase 1369 41.56 0 1421337..1421567 + 76 108563793 - HPAG1_1368 - carbon storage regulator 1370 38.42 0 1421564..1422388 + 274 108563794 - HPAG1_1369 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1371 32.46 -1 1422366..1422824 + 152 108563795 smpB HPAG1_1370 - SsrA-binding protein 1372 41.28 0 1422827..1423279 + 150 108563796 - HPAG1_1371 - biopolymer transport protein 1373 35.32 -1 1423290..1423691 + 133 108563797 - HPAG1_1372 - biopolymer transport protein 1374 45.19 +1 1423763..1423897 + 44 108563798 rpmH HPAG1_1373 - 50S ribosomal protein L34 1375 35.93 0 1423857..1424357 + 166 108563799 - HPAG1_1374 - ribonuclease P, protein component 1376 42.58 0 1424330..1424686 + 118 108563800 - HPAG1_1375 - hypothetical protein 1377 40.01 0 1424692..1426338 + 548 108563801 - HPAG1_1376 - putative inner membrane protein translocase component YidC 1378 36.93 0 1426338..1427144 + 268 108563802 - HPAG1_1377 - hypothetical protein 1379 39.47 0 1427104..1428489 + 461 108563803 trmE HPAG1_1378 - tRNA modification GTPase TrmE 1380 42.66 0 1428703..1430943 + 746 108563804 - HPAG1_1379 - outer membrane protein HomD 1381 23.13 -2 1431072..1431218 - 48 108563805 - HPAG1_1380 - hypothetical protein 1382 27.38 -2 1431375..1431626 + 83 108563806 - HPAG1_1381 - MobC-like protein 1383 36.72 0 1431707..1432237 + 176 108563807 - HPAG1_1382 - cagY like protein 1384 38.92 0 1432271..1432897 - 208 108563808 thyX HPAG1_1383 - FAD-dependent thymidylate synthase 1385 40.86 0 1432919..1434712 - 597 108563809 - HPAG1_1384 - D-fructose-6-phosphate amidotransferase 1386 33.75 -1 1434713..1434952 - 79 108563810 - HPAG1_1385 - hypothetical protein 1387 38.49 0 1434995..1435537 - 180 108563811 - HPAG1_1386 - purine nucleoside phosphorylase 1388 39.91 0 1435690..1437057 + 455 108563812 dnaA HPAG1_1387 - chromosomal replication initiation protein 1389 40.00 0 1437278..1438717 + 479 108563813 - HPAG1_1388 - hypothetical protein 1390 37.72 0 1438897..1439649 + 250 108563814 - HPAG1_1389 - exodeoxyribonuclease 1391 39.15 0 1439646..1440281 - 211 108563815 - HPAG1_1390 - hypothetical protein 1392 35.06 -1 1440285..1440632 - 115 108563816 - HPAG1_1391 - hypothetical protein 1393 38.25 0 1440714..1442585 + 623 108563817 - HPAG1_1392 - DNA recombinase 1394 33.84 -1 1442641..1444605 + 654 108563818 - HPAG1_1393 - type III R-M system modification enzyme 1395 36.33 0 1444608..1447508 + 966 108563819 - HPAG1_1394 - type III R-M system restriction enzyme 1396 37.43 0 1447627..1451385 + 1252 108563820 - HPAG1_1395 - type IIS restriction-modification protein 1397 29.03 -2 1451445..1451537 - 30 108563821 - HPAG1_1396 - hypothetical protein 1398 32.02 -1 1451939..1452622 - 227 108563822 - HPAG1_1397 - hypothetical protein 1399 39.90 0 1452679..1453866 - 395 108563823 nusA HPAG1_1398 - transcription elongation factor NusA 1400 37.64 0 1453968..1455128 - 386 108563824 - HPAG1_1399 - selenocysteine synthase 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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