version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1088 38.70 0 1142326..1143015 - 229 108563512 trmD HPAG1_1087 - tRNA (guanine-N(1)-)-methyltransferase 1089 37.48 0 1143016..1143570 - 184 108563513 - HPAG1_1088 - hypothetical protein 1090 40.12 0 1143571..1143894 - 107 108563514 - HPAG1_1089 - hypothetical protein 1091 41.99 0 1143911..1144141 - 76 108563515 rpsP HPAG1_1090 - 30S ribosomal protein S16 1092 41.65 0 1144215..1145561 - 448 108563516 - HPAG1_1091 - signal recognition particle protein 1093 39.70 0 1145576..1148200 - 874 108563517 valS HPAG1_1092 - valyl-tRNA synthetase 1094 37.01 0 1148331..1148738 + 135 108563518 - HPAG1_1093 - flagellar assembly protein FliW 1095 41.34 0 1148750..1149811 + 353 108563519 murG HPAG1_1094 - N-acetylglucosaminyl transferase 1096 42.80 0 1149919..1152009 + 696 108563520 - HPAG1_1095 - outer membrane protein HopI 1097 42.25 0 1152032..1155754 + 1240 108563521 - HPAG1_1096 - outer membrane protein HopL 1098 41.34 0 1155770..1156543 + 257 108563522 - HPAG1_1097 - pyrroline-5-carboxylate reductase 1099 36.89 0 1156571..1157104 + 177 108563523 - HPAG1_1098 - cell filamentation protein 1100 41.84 0 1157351..1157773 - 140 108563524 - HPAG1_1099 - putative metalloprotease 1101 42.83 0 1157827..1158321 - 164 108563525 - HPAG1_1100 - flavodoxin FldA 1102 37.97 0 1158413..1158994 - 193 108563526 - HPAG1_1101 - hypothetical protein 1103 39.06 0 1159117..1159308 + 63 108563527 - HPAG1_1102 - cation transport subunit for cbb3-type oxidase 1104 41.64 0 1159334..1160308 + 324 108563528 - HPAG1_1103 - thioredoxin reductase 1105 38.42 0 1160315..1161475 - 386 108563529 - HPAG1_1104 - tetracycline resistance protein tetA(P) 1106 40.66 0 1161539..1163176 + 545 108563530 - HPAG1_1105 - glucose-6-phosphate isomerase 1107 43.29 +1 1163482..1164897 + 471 108563531 - HPAG1_1106 - outer membrane protein HofH 1108 44.38 +1 1165190..1167253 - 687 108563532 - HPAG1_1107 - carbon starvation protein 1109 39.14 0 1167463..1168116 + 217 108563533 - HPAG1_1108 - glutamine ABC transporter, permease protein 1110 39.29 0 1168119..1168790 + 223 108563534 - HPAG1_1109 - glutamine ABC transporter, permease protein 1111 38.42 0 1168792..1169538 + 248 108563535 - HPAG1_1110 - glutamine ABC transporter, ATP-binding protein 1112 37.53 0 1169587..1170420 + 277 108563536 - HPAG1_1111 - glutamine ABC transporter, periplasmic glutamine-binding protein 1113 39.31 0 1170542..1171093 + 183 108563537 - HPAG1_1112 - hypothetical protein 1114 43.30 +1 1171316..1172539 - 407 108563538 - HPAG1_1113 - glucose/galactose transporter 1115 44.34 +1 1172668..1173975 - 435 108563539 - HPAG1_1114 - hypothetical protein 1116 40.24 0 1174427..1176352 - 641 108563540 - HPAG1_1115 - outer membrane protein HopQ 1117 35.48 -1 1176598..1176690 + 30 108563541 - HPAG1_1116 - hypothetical protein 1118 41.88 0 1176813..1177514 - 233 108563542 - HPAG1_1117 - purine-nucleoside phosphorylase 1119 39.05 0 1177511..1178752 - 413 108563543 - HPAG1_1118 - phosphopentomutase 1120 45.19 +1 1178764..1180020 - 418 108563544 - HPAG1_1119 - pyrimidine nucleoside transport protein 1121 41.14 0 1180333..1181664 + 443 108563545 - HPAG1_1120 - multidrug-efflux transporter 1122 42.13 0 1181684..1182445 + 253 108563546 - HPAG1_1121 - hypothetical protein 1123 38.19 0 1182454..1183605 - 383 108563547 - HPAG1_1122 - Na+/H+ antiporter 1124 39.57 0 1183631..1185010 - 459 108563549 - HPAG1_1123 - hypothetical protein 1125 29.35 -2 1184984..1185184 + 66 108563548 - HPAG1_1124 - hypothetical protein 1126 43.62 +1 1185171..1186346 - 391 108563550 - HPAG1_1125 - sugar efflux transporter 1127 42.07 0 1186622..1187365 + 247 108563551 - HPAG1_1126 - alpha-carbonic anhydrase 1128 35.14 -1 1187586..1188635 - 349 108563552 - HPAG1_1127 - hypothetical protein 1129 33.51 -1 1188900..1190063 - 387 108563553 - HPAG1_1128 - hypothetical protein 1130 34.36 -1 1190348..1191415 - 355 108563554 - HPAG1_1129 - hypothetical protein 1131 42.84 0 1191843..1192883 - 346 108563555 - HPAG1_1130 - aspartate-semialdehyde dehydrogenase 1132 38.45 0 1192870..1194198 - 442 108563556 hisS HPAG1_1131 - histidyl-tRNA synthetase 1133 40.38 0 1194260..1195309 + 349 108563557 - HPAG1_1132 - ADP-heptose-LPS heptosyltransferase II 1134 35.38 -1 1195501..1195890 - 129 108563558 - HPAG1_1133 - hypothetical protein 1135 45.31 +1 1196244..1198322 - 692 108563559 - HPAG1_1134 - elongation factor G 1136 44.23 +1 1198334..1198801 - 155 108563560 - HPAG1_1135 - 30S ribosomal protein S7 1137 42.16 0 1198817..1199224 - 135 108563561 rpsL HPAG1_1136 - 30S ribosomal protein S12 1138 43.48 +1 1199313..1207985 - 2890 108563562 - HPAG1_1137 - DNA-directed RNA polymerase subunit beta/beta' 1139 42.06 0 1208215..1208592 - 125 108563563 rplL HPAG1_1138 - 50S ribosomal protein L7/L12 1140 39.80 0 1208638..1209132 - 164 108563564 rplJ HPAG1_1139 - 50S ribosomal protein L10 1141 44.11 +1 1209241..1209945 - 234 108563565 rplA HPAG1_1140 - 50S ribosomal protein L1 1142 42.49 0 1209990..1210415 - 141 108563566 rplK HPAG1_1141 - 50S ribosomal protein L11 1143 39.92 0 1210433..1210963 - 176 108563567 nusG HPAG1_1142 - transcription antitermination protein NusG 1144 37.22 0 1210990..1211169 - 59 108563568 secE HPAG1_1143 - preprotein translocase subunit SecE 1145 35.85 0 1211427..1211585 - 52 108563569 rpmG HPAG1_1144 - 50S ribosomal protein L33 1146 44.94 +1 1211619..1212152 - 177 108563570 - HPAG1_1145 - translation elongation factor EF-Tu 1147 43.66 +1 1212092..1212817 - 241 108563571 - HPAG1_1146 - translation elongation factor EF-Tu 1148 37.82 0 1213514..1215250 + 578 108563572 - HPAG1_1147 - ABC transporter ATPase 1149 37.67 0 1215259..1215927 - 222 108563573 - HPAG1_1148 - hypothetical protein 1150 36.87 0 1216030..1217019 - 329 108563574 - HPAG1_1149 - type II adenine specific DNA methyltransferase 1151 34.14 -1 1217028..1217276 - 82 108563575 - HPAG1_1150 - iceA1 1152 36.47 0 1217269..1217715 - 148 108563576 - HPAG1_1151 - iceA1 1153 50.78 +2 1217800..1218315 - 171 108563577 - HPAG1_1152 - serine acetyltransferase 1154 45.60 +1 1218908..1219225 - 105 108563578 - HPAG1_1153 - F0F1 ATP synthase subunit C 1155 41.22 0 1219358..1221424 - 688 108563579 - HPAG1_1154 - polynucleotide phosphorylase/polyadenylase 1156 38.12 0 1221427..1222137 - 236 108563580 - HPAG1_1155 - hypothetical protein 1157 37.75 0 1222146..1224407 - 753 108563581 - HPAG1_1156 - organic solvent tolerance protein 1158 36.04 0 1224410..1224889 - 159 108563582 - HPAG1_1157 - hypothetical protein 1159 39.06 0 1224938..1226212 - 424 108563583 - HPAG1_1158 - glycinamide ribonucleotide synthetase 1160 32.84 -1 1226332..1226532 + 66 108563584 - HPAG1_1159 - hypothetical protein 1161 30.18 -2 1226595..1226975 - 126 108563585 - HPAG1_1160 - hypothetical protein 1162 26.23 -2 1227138..1227461 - 107 108563586 - HPAG1_1161 - hypothetical protein 1163 38.14 0 1227855..1228541 - 228 108563587 - HPAG1_1162 - ABC transporter, ATP-binding protein 1164 37.16 0 1228535..1229239 - 234 108563588 - HPAG1_1163 - hypothetical protein 1165 39.81 0 1229280..1232120 - 946 108563589 - HPAG1_1164 - D-lactate dehydrogenase 1166 39.34 0 1232192..1232524 + 110 108563590 - HPAG1_1165 - hypothetical protein 1167 37.74 0 1232527..1233207 + 226 108563591 hemD HPAG1_1166 - uroporphyrinogen-III synthase 1168 39.95 0 1233255..1233647 + 130 108563592 - HPAG1_1167 - hypothetical protein 1169 37.49 0 1233698..1234756 - 352 108563593 - HPAG1_1168 - coproporphyrinogen III oxidase 1170 40.55 0 1234832..1235122 + 96 108563594 - HPAG1_1169 - hypothetical protein 1171 42.31 0 1235283..1235750 + 155 108563595 - HPAG1_1170 - dinucleoside polyphosphate hydrolase 1172 45.48 +1 1235752..1236969 + 405 108563596 - HPAG1_1171 - aspartate kinase 1173 39.96 0 1236966..1237508 + 180 108563597 - HPAG1_1172 - hypothetical protein 1174 36.83 0 1237505..1238161 + 218 108563598 - HPAG1_1173 - DNA polymerase III subunit delta' 1175 40.07 0 1238158..1239300 + 380 108563599 - HPAG1_1174 - dihydropteroate synthase 1176 40.91 0 1239388..1239849 - 153 108563600 - HPAG1_1175 - hypothetical protein 1177 40.81 0 1240239..1241147 + 302 108563601 - HPAG1_1176 - hypothetical protein 1178 38.54 0 1241138..1242385 + 415 108563602 - HPAG1_1177 - hypothetical protein 1179 36.41 0 1242464..1243015 + 183 108563603 - HPAG1_1178 - hypothetical protein 1180 42.82 0 1243015..1244142 + 375 108563604 - HPAG1_1179 - carbamoyl phosphate synthase small subunit 1181 45.17 +1 1244308..1245312 + 334 108563605 amiF HPAG1_1180 - formamidase 1182 42.22 0 1245559..1245648 - 29 108563606 - HPAG1_1181 - hypothetical protein 1183 41.88 0 1245751..1246323 - 190 108563607 - HPAG1_1182 - Maf-like protein 1184 42.53 0 1246325..1248868 - 847 108563608 alaS HPAG1_1183 - alanyl-tRNA synthetase 1185 35.93 0 1248987..1249217 + 76 108563609 - HPAG1_1184 - hypothetical protein 1186 33.33 -1 1249607..1249855 - 82 108563610 - HPAG1_1185 - hypothetical protein 1187 44.84 +1 1250171..1252387 - 738 108563611 - HPAG1_1186 - outer membrane protein HopU 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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