version 1.0
Helicobacter pylori HPAG1, complete genome - 1..1596366 1536 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1010 37.48 0 1063243..1063773 - 176 108563434 - HPAG1_1009 - hypothetical protein 1011 39.54 0 1063947..1065170 + 407 108563435 - HPAG1_1010 - zinc-metalloprotease 1012 39.03 0 1065167..1065991 + 274 108563436 - HPAG1_1011 - S-adenosylmethionine-dependent methyltransferase 1013 44.25 +1 1066063..1067409 + 448 108563437 - HPAG1_1012 - glutamate dehydrogenase 1014 37.11 0 1067423..1068799 - 458 108563438 - HPAG1_1013 - alpha 1,3-fucosyltransferase 1015 40.55 0 1068809..1071619 - 936 108563439 - HPAG1_1014 - cytochrome c-type biogenesis protein 1016 36.24 0 1071606..1072292 - 228 108563440 - HPAG1_1015 - thiol:disulfide interchange protein 1017 37.30 0 1072366..1073373 - 335 108563441 hemH HPAG1_1016 - ferrochelatase 1018 35.42 -1 1073429..1073860 + 143 108563442 - HPAG1_1017 - hypothetical protein 1019 39.35 0 1073861..1074541 + 226 108563443 - HPAG1_1018 - hypothetical protein 1020 38.99 0 1074565..1076667 - 700 108563444 - HPAG1_1019 - outer membrane protein 1021 41.71 0 1076827..1077399 - 190 108563445 dcd HPAG1_1020 - deoxycytidine triphosphate deaminase 1022 42.24 0 1077517..1077999 + 160 108563446 - HPAG1_1021 - biotin carboxyl carrier protein 1023 43.72 +1 1078005..1079381 + 458 108563447 - HPAG1_1022 - biotin carboxylase 1024 34.06 -1 1079474..1080295 + 273 108563448 - HPAG1_1023 - putative type II DNA modification enzyme 1025 30.41 -2 1080265..1080435 + 56 108563449 - HPAG1_1024 - putative type II DNA modification enzyme 1026 32.69 -1 1080435..1080743 + 102 108563450 - HPAG1_1025 - hypothetical protein 1027 28.27 -2 1080748..1080984 + 78 108563451 - HPAG1_1026 - hypothetical protein 1028 38.05 0 1081077..1081670 + 197 108563452 - HPAG1_1027 - hypothetical protein 1029 38.08 0 1081667..1082803 + 378 108563453 - HPAG1_1028 - spore coat polysaccharide biosynthesis protein C 1030 39.08 0 1083113..1084138 + 341 108563454 nrdF HPAG1_1029 - ribonucleotide-diphosphate reductase subunit beta 1031 42.54 0 1084148..1084777 + 209 108563455 pcm HPAG1_1030 - protein-L-isoaspartate O-methyltransferase 1032 36.90 0 1084788..1085825 + 345 108563456 - HPAG1_1031 - hypothetical protein 1033 41.56 0 1085826..1086554 + 242 108563457 truA HPAG1_1032 - tRNA pseudouridine synthase A 1034 39.42 0 1086548..1087582 - 344 108563458 - HPAG1_1033 - UDP-glucose 4-epimerase 1035 37.37 0 1088114..1089649 + 511 108563459 - HPAG1_1034 - putative outer membrane protein 1036 43.03 +1 1089671..1090423 + 250 108563460 - HPAG1_1035 - short chain alcohol dehydrogenase 1037 42.84 0 1090636..1091508 - 290 108563461 - HPAG1_1036 - cysteine-rich protein C 1038 41.79 0 1091578..1092204 - 208 108563462 - HPAG1_1037 - 2-keto-3-deoxy-6-phosphogluconate aldolase 1039 42.69 0 1092223..1094049 - 608 108563463 - HPAG1_1038 - phosphogluconate dehydratase 1040 37.17 0 1094115..1095392 + 425 108563464 - HPAG1_1039 - glucose-6-phosphate 1-dehydrogenase 1041 39.04 0 1095403..1096086 + 227 108563465 - HPAG1_1040 - glucose-6-phosphate 1-dehydrogenase 1042 46.49 +2 1096073..1097083 + 336 108563466 glk HPAG1_1041 - glucokinase 1043 41.74 0 1097253..1098299 + 348 108563467 - HPAG1_1042 - mannitol dehydrogenase 1044 36.42 0 1098311..1099477 - 388 108563468 - HPAG1_1043 - putative lipopolysaccharide biosynthesis protein 1045 35.51 -1 1099615..1100811 - 398 108563469 - HPAG1_1044 - putative lipopolysaccharide biosynthesis protein 1046 39.76 0 1100986..1102293 + 435 108563470 - HPAG1_1045 - hypothetical protein 1047 39.97 0 1102300..1102992 - 230 108563471 - HPAG1_1046 - outer membrane protein HorH 1048 40.82 0 1103242..1103802 + 186 108563472 - HPAG1_1047 - pyruvate flavodoxin oxidoreductase subunit gamma 1049 43.26 +1 1103818..1104210 + 130 108563473 porD HPAG1_1048 - pyruvate flavodoxin oxidoreductase subunit delta 1050 45.10 +1 1104220..1105443 + 407 108563474 porA HPAG1_1049 - pyruvate flavodoxin oxidoreductase subunit alpha 1051 43.28 +1 1105456..1106400 + 314 108563475 - HPAG1_1050 - ferrodoxin oxidoreductase beta subunit 1052 42.03 0 1106510..1107832 + 440 108563476 - HPAG1_1051 - adenylosuccinate lyase 1053 38.37 0 1107897..1108730 + 277 108563477 - HPAG1_1052 - outer membrane protein Horl 1054 40.47 0 1108727..1110703 - 658 108563478 - HPAG1_1053 - excinuclease ABC subunit B 1055 35.54 -1 1110773..1111816 - 347 108563479 - HPAG1_1054 - hypothetical protein 1056 38.00 0 1112089..1112859 - 256 108563480 - HPAG1_1055 - cysteine-rich protein X 1057 43.54 +1 1113126..1114829 - 567 108563481 - HPAG1_1056 - gamma-glutamyltranspeptidase 1058 39.43 0 1115029..1116849 - 606 108563482 flgK HPAG1_1057 - flagellar hook-associated protein FlgK 1059 36.09 0 1116851..1117285 - 144 108563483 - HPAG1_1058 - hypothetical protein 1060 36.20 0 1117411..1118352 - 313 108563484 - HPAG1_1059 - type II DNA modification enzyme 1061 35.93 0 1118514..1118744 - 76 108563485 - HPAG1_1060 - hypothetical protein 1062 30.43 -2 1118781..1118987 - 68 108563486 - HPAG1_1061 - hypothetical protein 1063 43.73 +1 1119019..1119576 - 185 108563487 - HPAG1_1062 - peptidyl-prolyl cis-trans isomerase 1064 37.55 0 1119563..1120558 - 331 108563488 - HPAG1_1063 - hypothetical protein 1065 39.63 0 1120566..1121105 - 179 108563489 - HPAG1_1064 - peptidoglycan-associated lipoprotein precursor 1066 37.24 0 1121172..1122425 - 417 108563490 tolB HPAG1_1065 - translocation protein TolB 1067 34.30 -1 1122422..1123246 - 274 108563491 - HPAG1_1066 - hypothetical protein 1068 36.07 0 1123265..1123666 - 133 108563492 - HPAG1_1067 - biopolymer transport protein 1069 37.72 0 1123719..1124288 - 189 108563493 - HPAG1_1068 - biopolymer transport protein 1070 44.09 +1 1124299..1124670 - 123 108563494 atpC HPAG1_1069 - F0F1 ATP synthase subunit epsilon 1071 45.11 +1 1124681..1126090 - 469 108563495 - HPAG1_1070 - F0F1 ATP synthase subunit beta 1072 37.09 0 1126114..1127019 - 301 108563496 - HPAG1_1071 - F0F1 ATP synthase subunit gamma 1073 44.18 +1 1127034..1128545 - 503 108563497 - HPAG1_1072 - F0F1 ATP synthase subunit alpha 1074 33.70 -1 1128568..1129110 - 180 108563498 - HPAG1_1073 - F0F1 ATP synthase subunit delta 1075 33.33 -1 1129111..1129626 - 171 108563499 - HPAG1_1074 - F0F1 ATP synthase subunit B 1076 41.38 0 1129630..1130064 - 144 108563500 - HPAG1_1075 - F0F1 ATP synthase subunit B' 1077 38.03 0 1130175..1131047 - 290 108563501 - HPAG1_1076 - plasmid replication-partition related protein 1078 39.87 0 1131051..1131845 - 264 108563502 - HPAG1_1077 - spoOJ regulator 1079 39.59 0 1131848..1132486 - 212 108563503 - HPAG1_1078 - biotin--protein ligase 1080 39.54 0 1132483..1133400 - 305 108563504 fmt HPAG1_1079 - methionyl-tRNA formyltransferase 1081 29.78 -2 1133402..1135849 - 815 108563505 - HPAG1_1080 - hypothetical protein 1082 40.42 0 1135910..1137208 - 432 108563506 - HPAG1_1081 - hypothetical protein 1083 43.75 +1 1137467..1137562 + 31 108563507 - HPAG1_1082 - hypothetical protein 1084 29.23 -2 1137948..1138142 - 64 108563508 - HPAG1_1083 - hypothetical protein 1085 42.22 0 1140747..1141106 - 119 108563509 - HPAG1_1084 - hypothetical protein 1086 36.71 0 1141099..1141335 - 78 108563510 - HPAG1_1085 - hypothetical protein 1087 45.66 +1 1141947..1142303 - 118 108563511 rplS HPAG1_1086 - 50S ribosomal protein L19 1088 38.70 0 1142326..1143015 - 229 108563512 trmD HPAG1_1087 - tRNA (guanine-N(1)-)-methyltransferase 1089 37.48 0 1143016..1143570 - 184 108563513 - HPAG1_1088 - hypothetical protein 1090 40.12 0 1143571..1143894 - 107 108563514 - HPAG1_1089 - hypothetical protein 1091 41.99 0 1143911..1144141 - 76 108563515 rpsP HPAG1_1090 - 30S ribosomal protein S16 1092 41.65 0 1144215..1145561 - 448 108563516 - HPAG1_1091 - signal recognition particle protein 1093 39.70 0 1145576..1148200 - 874 108563517 valS HPAG1_1092 - valyl-tRNA synthetase 1094 37.01 0 1148331..1148738 + 135 108563518 - HPAG1_1093 - flagellar assembly protein FliW 1095 41.34 0 1148750..1149811 + 353 108563519 murG HPAG1_1094 - N-acetylglucosaminyl transferase 1096 42.80 0 1149919..1152009 + 696 108563520 - HPAG1_1095 - outer membrane protein HopI 1097 42.25 0 1152032..1155754 + 1240 108563521 - HPAG1_1096 - outer membrane protein HopL 1098 41.34 0 1155770..1156543 + 257 108563522 - HPAG1_1097 - pyrroline-5-carboxylate reductase 1099 36.89 0 1156571..1157104 + 177 108563523 - HPAG1_1098 - cell filamentation protein 1100 41.84 0 1157351..1157773 - 140 108563524 - HPAG1_1099 - putative metalloprotease 1101 42.83 0 1157827..1158321 - 164 108563525 - HPAG1_1100 - flavodoxin FldA 1102 37.97 0 1158413..1158994 - 193 108563526 - HPAG1_1101 - hypothetical protein 1103 39.06 0 1159117..1159308 + 63 108563527 - HPAG1_1102 - cation transport subunit for cbb3-type oxidase 1104 41.64 0 1159334..1160308 + 324 108563528 - HPAG1_1103 - thioredoxin reductase 1105 38.42 0 1160315..1161475 - 386 108563529 - HPAG1_1104 - tetracycline resistance protein tetA(P) 1106 40.66 0 1161539..1163176 + 545 108563530 - HPAG1_1105 - glucose-6-phosphate isomerase 1107 43.29 +1 1163482..1164897 + 471 108563531 - HPAG1_1106 - outer membrane protein HofH 1108 44.38 +1 1165190..1167253 - 687 108563532 - HPAG1_1107 - carbon starvation protein 1109 39.14 0 1167463..1168116 + 217 108563533 - HPAG1_1108 - glutamine ABC transporter, permease protein 39.24 MEAN 3.61 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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