version 1.0
Helicobacter hepaticus ATCC 51449, complete genome - 1..1799146 1875 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 549 38.15 0 528592..529152 - 186 32266048 porG HH0549 - pyruvate flavodoxin oxidoreductase subunit gamma 550 35.29 0 529245..529805 - 186 32266049 - HH0550 - hypothetical protein 551 33.33 0 529802..530215 - 137 32266050 - HH0551 - hypothetical protein 552 34.09 0 530256..530387 - 43 32266051 - HH0552 - hypothetical protein 553 28.55 -2 530406..531095 - 229 32266052 - HH0553 - hypothetical protein 554 33.33 0 531320..531901 - 193 32266053 - HH0554 - hypothetical protein 555 36.53 0 532007..533854 - 615 32266054 - HH0555 - hypothetical protein 556 31.18 -1 533866..533958 - 30 32266055 - HH0556 - hypothetical protein 557 38.18 0 534065..535198 + 377 32266056 - HH0557 - hypothetical protein 558 38.94 0 535467..536465 + 332 32266057 trpS HH0558 - tryptophanyl-tRNA synthetase 559 35.13 0 536462..537742 + 426 32266058 - HH0559 - hypothetical protein 560 40.76 +1 537878..539317 + 479 32266059 glnA HH0560 - glutamine synthase 561 38.33 0 539340..539819 - 159 32266060 - HH0561 - hypothetical protein 562 35.16 0 540133..540405 + 90 32266061 - HH0562 - hypothetical protein 563 39.76 +1 540429..541409 - 326 32266062 yurV HH0563 - NifU-like protein 564 40.45 +1 541609..542775 - 388 32266063 nifS HH0564 - cysteine desulfurase 565 39.29 0 542916..544292 - 458 32266064 fliI HH0565 - flagellum-specific ATP synthase 566 31.90 -1 544365..545693 + 442 32266065 tig HH0566 - trigger factor 567 35.53 0 545690..546280 + 196 32266066 clpP HH0567 - ATP-dependent Clp protease proteolytic subunit 568 34.03 0 546302..547453 + 383 32266067 - HH0568 - hypothetical protein 569 34.80 0 547401..547946 + 181 32266068 def HH0569 - peptide deformylase 570 38.12 0 548037..549476 + 479 32266069 - HH0570 - competence protein ComM 571 39.01 0 549501..549782 + 93 32266070 - HH0571 - hypothetical protein 572 35.16 0 549792..550559 - 255 32266071 - HH0572 - hypothetical protein 573 28.99 -1 550610..552220 - 536 32266072 - HH0573 - hypothetical protein 574 36.88 0 552226..552846 - 206 32266073 - HH0574 - hypothetical protein 575 35.49 0 552958..553560 - 200 32266074 - HH0575 - hypothetical protein 576 39.34 0 553581..554846 - 421 32266075 murA HH0576 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 577 31.37 -1 554863..555270 - 135 32266076 - HH0577 - hypothetical protein 578 36.25 0 555263..556015 - 250 32266077 galU HH0578 - UTP- glucose-1-phosphate uridylyltransferase 579 37.84 0 555999..556109 + 36 32266078 - HH0579 - hypothetical protein 580 32.47 0 556106..557734 - 542 32266079 - HH0580 - hypothetical protein 581 37.33 0 557756..558055 - 99 32266080 - HH0581 - hypothetical protein 582 34.46 0 558081..559406 - 441 32266081 gltX HH0582 - glutamyl-tRNA synthetase 583 34.91 0 559406..559975 - 189 32266082 - HH0583 - hypothetical protein 584 33.97 0 560485..560958 + 157 32266083 - HH0584 - hypothetical protein 585 35.13 0 560961..562517 - 518 32266084 - HH0585 - hypothetical protein 586 36.59 0 562622..564709 + 695 32266085 - HH0586 - cation transport ATPase 587 40.67 +1 564791..566167 - 458 32266086 - HH0587 - phosphodiesterase 588 33.76 0 566289..566993 - 234 32266087 - HH0588 - hypothetical protein 589 34.06 0 566971..567660 + 229 32266088 - HH0589 - hypothetical protein 590 36.51 0 567657..568538 + 293 32266089 ftsY HH0590 - signal recognition particle-docking GTPase FtsY 591 39.20 0 568538..569884 + 448 32266090 - HH0591 - DNA repair protein RadA 592 29.63 -1 570138..571514 + 458 32266091 - HH0592 - hypothetical protein 593 39.74 +1 571785..572096 - 103 32266092 atpE HH0593 - F0F1 ATP synthase subunit C 594 37.61 0 572204..574333 - 709 32266093 pnp HH0594 - polynucleotide phosphorylase/polyadenylase 595 33.03 0 574333..574998 - 221 32266094 - HH0595 - hypothetical protein 596 32.16 -1 575012..577144 - 710 32266095 - HH0596 - organic solvent tolerance protein 597 35.02 0 577222..577695 - 157 32266096 - HH0597 - hypothetical protein 598 39.73 +1 577692..578972 - 426 32266097 purD HH0598 - phosphoribosylamine--glycine ligase 599 36.38 0 579218..579973 - 251 32266098 - HH0599 - hypothetical protein 600 36.27 0 580066..580167 + 33 32266099 - HH0600 - hypothetical protein 601 37.48 0 580219..580965 - 248 32266100 truA HH0601 - tRNA pseudouridine synthase A 602 33.92 0 580965..581984 - 339 32266101 - HH0602 - hypothetical protein 603 31.17 -1 581984..582631 - 215 32266102 hopD HH0603 - type IV prepilin peptidase HopD 604 39.12 0 582647..583303 - 218 32266103 pcm HH0604 - protein-L-isoaspartate O-methyltransferase 605 33.47 0 583303..584040 - 245 32266104 - HH0605 - hypothetical protein 606 34.57 0 584030..585079 - 349 32266105 nrdF HH0606 - ribonucleotide-diphosphate reductase subunit beta 607 46.94 +2 585188..585334 - 48 32266106 - HH0607 - hypothetical protein 608 37.88 0 585378..587267 - 629 32266107 dxs HH0608 - 1-deoxy-D-xylulose-5-phosphate synthase 609 34.77 0 587293..588126 - 277 32266108 fliH HH0609 - flagellar assembly protein H 610 37.50 0 588113..589144 - 343 32266109 fliG HH0610 - flagellar motor switch protein G 611 36.43 0 589160..590872 - 570 32266110 fliF HH0611 - flagellar MS-ring protein 612 35.94 0 590882..591994 - 370 32266111 hisC HH0612 - histidinol-phosphate aminotransferase 613 36.92 0 592187..593635 + 482 32266112 glmM_1 HH0613 - phosphohexosemutase 614 40.21 +1 593645..594676 + 343 32266113 pyrC_2 HH0614 - dihydroorotase 615 33.15 0 594693..595808 - 371 32266114 hemN_2 HH0615 - coproporphyrinogen III oxidase 616 26.13 -2 595846..595956 + 36 32266115 - HH0616 - hypothetical protein 617 32.87 0 595982..596416 + 144 32266116 - HH0617 - dinucleoside polyphosphate hydrolase 618 38.14 0 596478..597683 + 401 32266117 lysC HH0618 - aspartate kinase 619 31.22 -1 597631..598245 + 204 32266118 - HH0619 - hypothetical protein 620 33.49 0 598268..598888 + 206 32266119 holB HH0620 - DNA polymerase III subunit delta' 621 35.90 0 598966..600015 + 349 32266120 folP HH0621 - dihydropteroate synthase 622 30.60 -1 600012..600998 + 328 32266121 - HH0622 - hypothetical protein 623 35.86 0 601070..602374 + 434 32266122 - HH0623 - hypothetical protein 624 36.00 0 602371..603456 + 361 32266123 - HH0624 - hypothetical protein 625 38.91 0 603456..606521 + 1021 32266124 - HH0625 - hypothetical protein 626 32.61 0 606522..607490 - 322 32266125 - HH0626 - hypothetical protein 627 36.35 0 607483..608577 - 364 32266126 wlaK HH0627 - hypothetical protein 628 34.52 0 608630..609133 - 167 32266127 aroK HH0628 - shikimate kinase 629 34.14 0 609136..609753 - 205 32266128 - HH0629 - hypothetical protein 630 31.84 -1 609750..610016 - 88 32266129 - HH0630 - hypothetical protein 631 37.87 0 610031..611308 - 425 32266130 eno HH0631 - phosphopyruvate hydratase 632 33.79 0 611335..611553 - 72 32266131 - HH0632 - hypothetical protein 633 39.88 +1 611572..612609 - 345 32266132 recA HH0633 - recombinase A 634 35.43 0 612710..613567 + 285 32266133 - HH0634 - hypothetical protein 635 32.96 0 613577..614644 - 355 32266134 - HH0635 - hypothetical protein 636 36.97 0 614897..616189 + 430 32266135 metY HH0636 - O-acetylhomoserine (thiol)-lyase MetY 637 34.01 0 616198..617079 + 293 32266136 metA HH0637 - homoserine O-succinyltransferase 638 35.36 0 617111..617947 + 278 32266137 - HH0638 - hypothetical protein 639 33.33 0 617980..618756 + 258 32266138 - HH0639 - hypothetical protein 640 35.88 0 618784..620040 + 418 32266139 waaA HH0640 - 3-deoxy-D-manno-octulosonic-acid transferase 641 37.13 0 620040..620777 + 245 32266140 - HH0641 - ribosomal pseudouridine synthase 642 35.38 0 620783..621367 + 194 32266141 - HH0642 - hypothetical protein 643 34.12 0 621382..622275 - 297 32266142 - HH0643 - hypothetical protein 644 37.73 0 622353..623693 - 446 32266143 kfiD HH0644 - UDP-glucose 6-dehydrogenase 645 32.78 0 623729..624268 - 179 32266144 - HH0645 - hypothetical protein 646 42.65 +1 624464..624742 - 92 32266145 fdxA HH0646 - ferredoxin 647 37.70 0 624954..625892 + 312 32266146 - HH0647 - nucleotide sugar dehydratase 648 33.14 0 625889..626902 + 337 32266147 - HH0648 - hypothetical protein 35.80 MEAN 3.58 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0