version 1.0
Helicobacter hepaticus ATCC 51449, complete genome - 1..1799146 1875 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 518 34.61 0 500164..501024 - 286 32266017 ribF HH0518 - bifunctional riboflavin kinase/FMN adenylyltransferase 519 38.71 0 500993..501718 - 241 32266018 - HH0519 - hypothetical protein 520 30.62 -1 501727..502242 - 171 32266019 - HH0520 - hypothetical protein 521 39.60 +1 502410..503303 + 297 32266020 pyrB HH0521 - aspartate carbamoyltransferase catalytic subunit 522 39.66 +1 503427..504737 + 436 32266021 - HH0522 - hypothetical protein 523 39.18 0 504844..505698 + 284 32266022 cdsA HH0523 - CDP-diglyceride synthetase CdsA 524 38.11 0 505702..506811 + 369 32266023 dxr HH0524 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 525 38.50 0 506966..507604 + 212 32266024 - HH0525 - hypothetical protein 526 31.25 -1 507605..507700 + 31 32266025 - HH0526 - hypothetical protein 527 37.67 0 507717..509261 + 514 32266026 thrC HH0527 - threonine synthase 528 41.82 +1 509346..509840 + 164 32266027 purE HH0528 - phosphoribosylaminoimidazole carboxylase catalytic subunit 529 37.27 0 509850..510332 + 160 32266028 - HH0529 - hypothetical protein 530 38.33 0 510329..511249 + 306 32266029 - HH0530 - hypothetical protein 531 38.24 0 511258..512154 + 298 32266030 glyQ HH0531 - glycyl-tRNA synthetase subunit alpha 532 38.54 0 512154..514208 + 684 32266031 - HH0532 - hypothetical protein 533 36.97 0 514218..514904 + 228 32266032 - HH0533 - hypothetical protein 534 37.18 0 515008..516852 + 614 32266033 - HH0534 - hypothetical protein 535 32.74 0 517329..518339 + 336 32266034 - HH0535 - DNA polymerase III subunit delta 536 35.99 0 518434..518847 + 137 32266035 rpsF HH0536 - 30S ribosomal protein S6 537 38.99 0 518865..519377 + 170 32266036 ssb HH0537 - single-strand DNA-binding protein 538 37.25 0 519396..519650 + 84 161546631 rpsR HH0538 - 30S ribosomal protein S18 539 36.24 0 519753..521816 + 687 32266038 - HH0539 - hypothetical protein 540 36.71 0 521952..522722 + 256 32266039 - HH0540 - hypothetical protein 541 37.00 0 522724..522996 - 90 32266040 rpsO HH0541 - 30S ribosomal protein S15 542 32.65 0 523088..523234 - 48 32266041 - HH0542 - hypothetical protein 543 35.90 0 523405..523560 - 51 32266042 - HH0543 - hypothetical protein 544 32.44 0 523699..523923 - 74 32266043 - HH0544 - hypothetical protein 545 35.58 0 523978..525849 - 623 32266044 rpoD HH0545 - RNA polymerase sigma factor RpoD 546 39.87 +1 525972..526919 - 315 32266045 porB HH0546 - ferrodoxin oxidoreductase beta subunit 547 42.26 +1 526930..528150 - 406 32266046 porA HH0547 - pyruvate flavodoxin oxidoreductase subunit alpha 548 37.23 0 528162..528572 - 136 32266047 porD HH0548 - pyruvate flavodoxin oxidoreductase subunit delta 549 38.15 0 528592..529152 - 186 32266048 porG HH0549 - pyruvate flavodoxin oxidoreductase subunit gamma 550 35.29 0 529245..529805 - 186 32266049 - HH0550 - hypothetical protein 551 33.33 0 529802..530215 - 137 32266050 - HH0551 - hypothetical protein 552 34.09 0 530256..530387 - 43 32266051 - HH0552 - hypothetical protein 553 28.55 -2 530406..531095 - 229 32266052 - HH0553 - hypothetical protein 554 33.33 0 531320..531901 - 193 32266053 - HH0554 - hypothetical protein 555 36.53 0 532007..533854 - 615 32266054 - HH0555 - hypothetical protein 556 31.18 -1 533866..533958 - 30 32266055 - HH0556 - hypothetical protein 557 38.18 0 534065..535198 + 377 32266056 - HH0557 - hypothetical protein 558 38.94 0 535467..536465 + 332 32266057 trpS HH0558 - tryptophanyl-tRNA synthetase 559 35.13 0 536462..537742 + 426 32266058 - HH0559 - hypothetical protein 560 40.76 +1 537878..539317 + 479 32266059 glnA HH0560 - glutamine synthase 561 38.33 0 539340..539819 - 159 32266060 - HH0561 - hypothetical protein 562 35.16 0 540133..540405 + 90 32266061 - HH0562 - hypothetical protein 563 39.76 +1 540429..541409 - 326 32266062 yurV HH0563 - NifU-like protein 564 40.45 +1 541609..542775 - 388 32266063 nifS HH0564 - cysteine desulfurase 565 39.29 0 542916..544292 - 458 32266064 fliI HH0565 - flagellum-specific ATP synthase 566 31.90 -1 544365..545693 + 442 32266065 tig HH0566 - trigger factor 567 35.53 0 545690..546280 + 196 32266066 clpP HH0567 - ATP-dependent Clp protease proteolytic subunit 568 34.03 0 546302..547453 + 383 32266067 - HH0568 - hypothetical protein 569 34.80 0 547401..547946 + 181 32266068 def HH0569 - peptide deformylase 570 38.12 0 548037..549476 + 479 32266069 - HH0570 - competence protein ComM 571 39.01 0 549501..549782 + 93 32266070 - HH0571 - hypothetical protein 572 35.16 0 549792..550559 - 255 32266071 - HH0572 - hypothetical protein 573 28.99 -1 550610..552220 - 536 32266072 - HH0573 - hypothetical protein 574 36.88 0 552226..552846 - 206 32266073 - HH0574 - hypothetical protein 575 35.49 0 552958..553560 - 200 32266074 - HH0575 - hypothetical protein 576 39.34 0 553581..554846 - 421 32266075 murA HH0576 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 577 31.37 -1 554863..555270 - 135 32266076 - HH0577 - hypothetical protein 578 36.25 0 555263..556015 - 250 32266077 galU HH0578 - UTP- glucose-1-phosphate uridylyltransferase 579 37.84 0 555999..556109 + 36 32266078 - HH0579 - hypothetical protein 580 32.47 0 556106..557734 - 542 32266079 - HH0580 - hypothetical protein 581 37.33 0 557756..558055 - 99 32266080 - HH0581 - hypothetical protein 582 34.46 0 558081..559406 - 441 32266081 gltX HH0582 - glutamyl-tRNA synthetase 583 34.91 0 559406..559975 - 189 32266082 - HH0583 - hypothetical protein 584 33.97 0 560485..560958 + 157 32266083 - HH0584 - hypothetical protein 585 35.13 0 560961..562517 - 518 32266084 - HH0585 - hypothetical protein 586 36.59 0 562622..564709 + 695 32266085 - HH0586 - cation transport ATPase 587 40.67 +1 564791..566167 - 458 32266086 - HH0587 - phosphodiesterase 588 33.76 0 566289..566993 - 234 32266087 - HH0588 - hypothetical protein 589 34.06 0 566971..567660 + 229 32266088 - HH0589 - hypothetical protein 590 36.51 0 567657..568538 + 293 32266089 ftsY HH0590 - signal recognition particle-docking GTPase FtsY 591 39.20 0 568538..569884 + 448 32266090 - HH0591 - DNA repair protein RadA 592 29.63 -1 570138..571514 + 458 32266091 - HH0592 - hypothetical protein 593 39.74 +1 571785..572096 - 103 32266092 atpE HH0593 - F0F1 ATP synthase subunit C 594 37.61 0 572204..574333 - 709 32266093 pnp HH0594 - polynucleotide phosphorylase/polyadenylase 595 33.03 0 574333..574998 - 221 32266094 - HH0595 - hypothetical protein 596 32.16 -1 575012..577144 - 710 32266095 - HH0596 - organic solvent tolerance protein 597 35.02 0 577222..577695 - 157 32266096 - HH0597 - hypothetical protein 598 39.73 +1 577692..578972 - 426 32266097 purD HH0598 - phosphoribosylamine--glycine ligase 599 36.38 0 579218..579973 - 251 32266098 - HH0599 - hypothetical protein 600 36.27 0 580066..580167 + 33 32266099 - HH0600 - hypothetical protein 601 37.48 0 580219..580965 - 248 32266100 truA HH0601 - tRNA pseudouridine synthase A 602 33.92 0 580965..581984 - 339 32266101 - HH0602 - hypothetical protein 603 31.17 -1 581984..582631 - 215 32266102 hopD HH0603 - type IV prepilin peptidase HopD 604 39.12 0 582647..583303 - 218 32266103 pcm HH0604 - protein-L-isoaspartate O-methyltransferase 605 33.47 0 583303..584040 - 245 32266104 - HH0605 - hypothetical protein 606 34.57 0 584030..585079 - 349 32266105 nrdF HH0606 - ribonucleotide-diphosphate reductase subunit beta 607 46.94 +2 585188..585334 - 48 32266106 - HH0607 - hypothetical protein 608 37.88 0 585378..587267 - 629 32266107 dxs HH0608 - 1-deoxy-D-xylulose-5-phosphate synthase 609 34.77 0 587293..588126 - 277 32266108 fliH HH0609 - flagellar assembly protein H 610 37.50 0 588113..589144 - 343 32266109 fliG HH0610 - flagellar motor switch protein G 611 36.43 0 589160..590872 - 570 32266110 fliF HH0611 - flagellar MS-ring protein 612 35.94 0 590882..591994 - 370 32266111 hisC HH0612 - histidinol-phosphate aminotransferase 613 36.92 0 592187..593635 + 482 32266112 glmM_1 HH0613 - phosphohexosemutase 614 40.21 +1 593645..594676 + 343 32266113 pyrC_2 HH0614 - dihydroorotase 615 33.15 0 594693..595808 - 371 32266114 hemN_2 HH0615 - coproporphyrinogen III oxidase 616 26.13 -2 595846..595956 + 36 32266115 - HH0616 - hypothetical protein 617 32.87 0 595982..596416 + 144 32266116 - HH0617 - dinucleoside polyphosphate hydrolase 35.80 MEAN 3.58 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.