version 1.0
Helicobacter hepaticus ATCC 51449, complete genome - 1..1799146 1875 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1551 37.57 0 1486408..1488321 + 637 32267050 priA HH1551 - primosome assembly protein PriA 1552 34.01 0 1488377..1488817 + 146 32267051 - HH1552 - hypothetical protein 1553 33.84 0 1488866..1489456 + 196 32267052 - HH1553 - hypothetical protein 1554 38.75 0 1489459..1490049 + 196 32267053 fliL HH1554 - flagellar basal body-associated protein FliL 1555 37.47 0 1490054..1490416 + 120 32267054 acpS HH1555 - 4'-phosphopantetheinyl transferase 1556 22.64 -2 1490409..1490567 - 52 32267055 - HH1556 - hypothetical protein 1557 39.36 0 1490656..1491999 - 447 161546623 aroF HH1557 - phospho-2-dehydro-3-deoxyheptonate aldolase 1558 31.58 -1 1491941..1492054 - 37 32267057 - HH1558 - hypothetical protein 1559 39.31 0 1492063..1492815 - 250 32267058 - HH1559 - oxidoreductase 1560 34.62 0 1492812..1493819 - 335 32267059 - HH1560 - hypothetical protein 1561 33.33 0 1493782..1494357 - 191 32267060 - HH1561 - hypothetical protein 1562 20.59 -2 1494380..1494481 - 33 32267061 - HH1562 - hypothetical protein 1563 35.69 0 1494552..1495316 - 254 32267062 - HH1563 - hypothetical protein 1564 36.23 0 1495297..1497573 - 758 32267063 clpB HH1564 - ATP-dependent Clp protease ClpB 1565 37.88 0 1497586..1497849 - 87 32267064 - HH1565 - hypothetical protein 1566 32.29 0 1497851..1497946 + 31 32267065 - HH1566 - hypothetical protein 1567 37.63 0 1498061..1498618 - 185 32267066 oorC HH1567 - 2-oxoglutarate-acceptor oxidoreductase subunit OorC 1568 38.53 0 1498620..1499447 - 275 32267067 oorB HH1568 - 2-oxoglutarate-acceptor oxidoreductase subunit OorB 1569 39.29 0 1499449..1500573 - 374 32267068 oorA HH1569 - 2-oxoglutarate-acceptor oxidoreductase subunit OorA 1570 40.06 +1 1500583..1500894 - 103 32267069 oorD HH1570 - 2-oxoglutarate-acceptor oxidoreductase subunit OorD 1571 36.81 0 1500939..1501886 - 315 32267070 mdh HH1571 - malate dehydrogenase 1572 35.77 0 1502015..1502917 - 300 32267071 pabC HH1572 - hypothetical protein 1573 32.49 0 1502880..1505837 + 985 32267072 - HH1573 - hypothetical protein 1574 35.14 0 1505888..1506163 + 91 32267073 - HH1574 - hypothetical protein 1575 34.05 0 1506171..1506863 + 230 32267074 nth HH1575 - endonuclease III 1576 34.57 0 1506941..1507345 + 134 32267075 - HH1576 - hypothetical protein 1577 37.01 0 1507362..1507715 + 117 32267076 fliN HH1577 - flagellar motor switch protein 1578 34.09 0 1507833..1508624 + 263 32267077 - HH1578 - hypothetical protein 1579 36.76 0 1508624..1509382 + 252 32267078 - HH1579 - hypothetical protein 1580 37.00 0 1509394..1509693 - 99 32267079 - HH1580 - hypothetical protein 1581 39.67 +1 1509707..1511080 - 457 32267080 thiC HH1581 - thiamine biosynthesis protein ThiC 1582 37.78 0 1511265..1512434 + 389 32267081 ispDF HH1582 - bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 1583 33.11 0 1512482..1513390 + 302 32267082 - HH1583 - hypothetical protein 1584 35.80 0 1513387..1513872 + 161 32267083 pgpA HH1584 - phosphatidylglycerophosphatase A 1585 28.32 -2 1513894..1514412 - 172 32267084 - HH1585 - hypothetical protein 1586 33.33 0 1514436..1514537 - 33 32267085 - HH1586 - hypothetical protein 1587 35.53 0 1514559..1515104 - 181 32267086 - HH1587 - hypothetical protein 1588 41.57 +1 1515149..1515961 - 270 32267087 thiF HH1588 - thiamine biosynthesis protein ThiF 1589 34.85 0 1515961..1518330 - 789 32267088 pflA HH1589 - paralysed flagella protein PflA 1590 34.82 0 1518370..1519848 - 492 32267089 nuoN HH1590 - NADH dehydrogenase subunit N 1591 36.12 0 1519850..1521427 - 525 32267090 nuoM HH1591 - NADH dehydrogenase subunit M 1592 37.17 0 1521424..1523301 - 625 32267091 nuoL HH1592 - NADH dehydrogenase subunit L 1593 33.00 0 1523304..1523606 - 100 32267092 nuoK HH1593 - NADH dehydrogenase subunit K 1594 32.76 0 1523603..1524124 - 173 32267093 nuoJ HH1594 - NADH dehydrogenase subunit J 1595 38.03 0 1524117..1524755 - 212 32267094 nuoI HH1595 - NADH dehydrogenase subunit I 1596 39.14 0 1524764..1525762 - 332 32267095 nuoH HH1596 - NADH dehydrogenase subunit H 1597 36.16 0 1525759..1528233 - 824 32267096 nuoG HH1597 - NADH dehydrogenase subunit G 1598 35.67 0 1528230..1529042 - 270 32267097 - HH1598 - hypothetical protein 1599 32.90 0 1529039..1529269 - 76 32267098 - HH1599 - hypothetical protein 1600 36.18 0 1529279..1530508 - 409 32267099 nuoD HH1600 - NADH dehydrogenase subunit D 1601 34.01 0 1530505..1531248 - 247 32267100 nuoC HH1601 - NADH dehydrogenase subunit C 1602 40.00 +1 1531262..1531771 - 169 32267101 nuoB HH1602 - NADH dehydrogenase subunit B 1603 36.05 0 1531753..1532157 - 134 32267102 nuoA HH1603 - NADH dehydrogenase subunit A 1604 37.80 0 1532285..1533001 - 238 161546622 yebC HH1604 - hypothetical protein 1605 32.38 0 1532989..1533093 + 34 32267104 - HH1605 - hypothetical protein 1606 36.81 0 1533122..1534099 - 325 32267105 hemB HH1606 - delta-aminolevulinic acid dehydratase 1607 31.75 -1 1534110..1535369 - 419 32267106 - HH1607 - two-component system histidine kinase 1608 36.04 0 1535384..1536049 - 221 32267107 - HH1608 - two-component system response regulator 1609 43.59 +2 1536243..1536359 + 38 32267108 - HH1609 - hypothetical protein 1610 35.83 0 1536474..1536833 - 119 32267109 - HH1610 - hypothetical protein 1611 34.85 0 1536803..1537066 - 87 32267110 - HH1611 - hypothetical protein 1612 35.07 0 1537143..1537946 - 267 32267111 - HH1612 - hypothetical protein 1613 27.18 -2 1537936..1538244 - 102 32267112 - HH1613 - hypothetical protein 1614 36.49 0 1538248..1539579 - 443 32267113 - HH1614 - hypothetical protein 1615 39.70 +1 1539596..1540129 - 177 32267114 ppiA HH1615 - peptidyl-prolyl cis-trans isomerase (rotamase) 1616 31.77 -1 1540369..1541265 + 298 32267115 - HH1616 - hypothetical protein 1617 24.73 -2 1541277..1541369 - 30 32267116 - HH1617 - hypothetical protein 1618 37.59 0 1541379..1542764 + 461 32267117 - HH1618 - protease 1619 34.74 0 1542780..1543490 + 236 32267118 purC HH1619 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1620 33.74 0 1543500..1543742 + 80 32267119 purS HH1620 - hypothetical protein 1621 37.52 0 1543739..1544407 + 222 32267120 purQ HH1621 - phosphoribosylformylglycinamidine synthase subunit I 1622 32.05 -1 1544420..1545514 + 364 32267121 - HH1622 - hypothetical protein 1623 37.45 0 1545498..1546226 + 242 32267122 plsC HH1623 - 1-acyl-glycerol-3-phosphate acyltransferase PlsC 1624 37.10 0 1546443..1547849 + 468 32267123 pyrD HH1624 - dihydroorotate dehydrogenase 1625 34.26 0 1547880..1549178 + 432 32267124 - HH1625 - putative zinc protease 1626 37.87 0 1549181..1550062 + 293 32267125 dapA HH1626 - dihydrodipicolinate synthase 1627 38.18 0 1550059..1550862 + 267 32267126 - HH1627 - 7-alpha-hydroxysteroid dehydrogenase 1628 34.16 0 1551027..1552229 + 400 32267127 - HH1628 - apolipoprotein N-acyltransferase 1629 36.88 0 1552335..1553096 + 253 32267128 - HH1629 - hypothetical protein 1630 35.50 0 1553201..1554865 + 554 32267129 - HH1630 - hypothetical protein 1631 37.60 0 1554891..1556297 - 468 32267130 dagA HH1631 - amino-acid transport protein 1632 33.81 0 1556472..1557098 - 208 32267131 - HH1632 - hypothetical protein 1633 37.62 0 1557237..1559711 + 824 32267132 gyrA HH1633 - DNA gyrase subunit A 1634 37.13 0 1559752..1560225 + 157 32267133 - HH1634 - hypothetical protein 1635 37.22 0 1560222..1561532 + 436 32267134 flgR HH1635 - transcriptional activator FlgR 1636 31.23 -1 1561553..1562074 + 173 32267135 - HH1636 - hypothetical protein 1637 36.00 0 1562121..1562984 - 287 32267136 - HH1637 - hypothetical protein 1638 34.16 0 1563169..1564134 - 321 32267137 - HH1638 - hypothetical protein 1639 33.67 0 1564262..1565158 - 298 32267138 - HH1639 - hypothetical protein 1640 36.89 0 1565151..1566386 - 411 32267139 - HH1640 - recombination factor protein RarA 1641 37.83 0 1566380..1566757 - 125 32267140 hspR HH1641 - putative heat shock transcriptional regulator 1642 38.81 0 1566783..1567676 - 297 32267141 cbpA HH1642 - curved DNA-binding protein CbpA 1643 32.00 -1 1567835..1570750 + 971 32267142 - HH1643 - putative helicase 1644 34.35 0 1571029..1572411 + 460 32267143 - HH1644 - hypothetical protein 1645 37.83 0 1572432..1573766 + 444 32267144 nhaA HH1645 - Na+/H+ antiporter 1646 33.33 0 1573817..1574110 + 97 32267145 yajC HH1646 - preprotein translocase subunit YajC 1647 38.01 0 1574117..1575955 + 612 32267146 secD HH1647 - preprotein translocase subunit SecD 1648 35.91 0 1575959..1576930 + 323 32267147 secF HH1648 - preprotein translocase subunit SecF 1649 34.21 0 1576941..1577282 + 113 32267148 - HH1649 - hypothetical protein 1650 35.43 0 1577318..1578031 + 237 32267149 - HH1650 - hypothetical protein 35.80 MEAN 3.58 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.