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Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 773 47.64 0 975402..976079 + 225 110667749 tdk HQ1795A - thymidine kinase 774 50.25 0 976088..976690 + 200 110667750 - HQ1796A - hypothetical protein 775 49.70 0 976776..979079 + 767 110667751 - HQ1797A - RecJ-like exonuclease 776 47.72 0 979438..981147 + 569 110667752 hat HQ1798A - histone acetyltransferase-like protein 777 46.99 0 981229..981843 - 204 110667753 - HQ1799A - acetyltransferase 778 44.90 -1 981921..982733 - 270 110667754 - HQ1800A - hypothetical protein 779 47.64 0 982919..985078 + 719 110667755 - HQ1801A - hypothetical protein 780 48.31 0 985114..986181 + 355 110667756 pelA HQ1802A - cell division protein pelota 781 47.06 0 986238..986543 - 101 110667757 ocd HQ1803A - ornithine cyclodeaminase 782 49.06 0 986603..986869 - 88 110667758 - HQ1804A - hypothetical protein 783 48.25 0 987274..988044 + 256 110667759 cre HQ1805A - creatinine amidohydrolase 784 47.37 0 988293..988976 - 227 110667760 dsbG HQ1806A - protein-disulfide isomerase 785 44.75 -1 990226..990444 + 72 110667761 - HQ1807A - hypothetical protein 786 46.27 0 990480..990935 + 151 110667762 - HQ1808A - hypothetical protein 787 46.63 0 991219..991782 - 187 110667763 - HQ1809A - hypothetical protein 788 43.40 -1 991901..992347 + 148 110667764 hsp20 HQ1810A - hsp20-type chaperone 789 46.74 0 992938..993519 + 193 110667765 lrp HQ1811A - transcription regulator 790 48.90 0 993516..994793 + 425 110667766 aspC HQ1812A - PLP-dependent aminotransferase ( aspartate aminotransferase ) 791 46.13 0 995376..996875 + 499 110667767 - HQ1813A - hypothetical protein 792 46.30 0 996872..997534 + 220 110667768 salX HQ1814A - peptide ABC transporter ATP-binding protein 793 47.89 0 997531..998691 + 386 110667769 salY HQ1815A - peptide ABC transporter permease 794 49.13 0 998795..1000060 + 421 110667770 - HQ1816A - glucose dehydrogenase, type B; L-sorbosone dehydrogenase 795 48.91 0 1000781..1001191 + 136 110667771 - HQ1816B - ISH9-type transposase (TCE34) (nonfunctional,N-terminal part) 796 54.17 +1 1001621..1001980 - 119 110667772 - HQ1817A - hypothetical protein 797 45.71 0 1002351..1002980 - 209 110667773 - HQ1818A - hypothetical protein 798 42.44 -1 1003198..1005195 - 665 110667774 - HQ1819A - hypothetical protein 799 48.74 0 1006987..1007940 + 317 110667775 - HQ1820A - short chain dehydrogenase/ reductase 800 45.71 0 1007950..1009290 + 446 110667776 - HQ1821A - hypothetical protein 801 50.03 0 1010033..1011715 - 560 110667777 - HQ1822A - alkaline phosphatase; cell surface glycoprotein 802 53.03 +1 1012002..1012199 + 65 110667778 - HQ1823A - hypothetical protein 803 44.96 0 1013196..1013780 - 194 110667779 - HQ1824A - hypothetical protein 804 48.10 0 1014646..1015119 - 157 110667780 - HQ1825A - hypothetical protein 805 44.76 -1 1015234..1015653 - 139 110667781 - HQ1826A - hypothetical protein 806 47.07 0 1015690..1016082 - 130 110667782 - HQ1827A - hypothetical protein 807 46.74 0 1016232..1016783 + 183 110667783 cbs HQ1828A - CBS domain-containing protein 808 49.45 0 1016940..1018304 - 454 110667784 cbiA HQ1829A - cobyrinic acid a,c-diamide synthase 809 49.57 0 1018301..1018645 - 114 110667785 - HQ1830A - cobalamin operon protein 810 46.87 0 1018642..1019616 - 324 110667786 cbiG HQ1831A - cobalamin biosynthesis protein CbiG 811 48.20 0 1019609..1020496 - 295 110667787 cbiF HQ1832A - precorrin-4 C11-methyltransferase 812 48.23 0 1020493..1021197 - 234 110667788 cbiL HQ1833A - cobalt-precorrin-2 C(20)-methyltransferase 813 49.10 0 1021197..1021754 - 185 110667789 cbiT HQ1834A - precorrin-8W decarboxylase 814 50.08 0 1021908..1022570 + 220 110667790 cbiM HQ1835A - cobalt transport protein CbiM 815 49.83 0 1022567..1022863 + 98 110667791 cbiN HQ1836A - CbiN protein ( ABC-type cobalt transport system, periplasmic component) 816 45.36 0 1022847..1023578 + 243 110667792 cbiQ HQ1837A - CbiQ protein ( ABC-type cobalt transport system permease protein 1) 817 48.56 0 1023575..1024303 + 242 110667793 cbiO HQ1838A - CbiO protein ( ABC-type cobalt transport system ATP-binding protein) 818 43.33 -1 1024583..1024822 + 79 110667794 - HQ1839A - hypothetical protein 819 50.75 0 1025055..1025852 + 265 110667795 - HQ1840A - short chain dehydrogenase/ reductase 820 47.94 0 1025940..1027130 + 396 110667796 - HQ1841A - major facilitator superfamily transporter 821 45.96 0 1028119..1028601 + 160 110667797 folA HQ1842A - dihydrofolate reductase 822 44.95 0 1029203..1029727 + 174 110667798 msrA HQ1843A - methionine sulfoxide reductase A 823 47.25 0 1029884..1031263 - 459 110667799 proA HQ1844A - glutamate-5-semialdehyde dehydrogenase 824 45.52 0 1031473..1032432 - 319 110667800 proB HQ1845A - glutamate 5-kinase 825 46.33 0 1032425..1033201 - 258 110667801 proC HQ1846A - pyrroline-5-carboxylate reductase 826 49.19 0 1033487..1034785 + 432 110667802 - HQ1847A - putative acetamidase/formamidase 827 46.35 0 1034884..1035267 - 127 110667803 - HQ1848A - hypothetical protein 828 50.00 0 1035526..1036161 + 211 110667804 - HQ1849A - hypothetical protein 829 49.01 0 1036167..1037825 + 552 110667805 norM HQ1850A - sodium-driven multidrug efflux pump 830 49.02 0 1037875..1040418 - 847 110667806 - HQ1851A - helicase 831 49.65 0 1040539..1042101 - 520 110667807 - HQ1852A - DNA repair and recombination protein radA 832 47.58 0 1042503..1042853 + 116 110667808 - HQ1853A - hypothetical protein 833 44.98 0 1042956..1044080 + 374 110667809 - HQ1854A - hypothetical protein 834 49.24 0 1044205..1045323 + 372 110667810 degP HQ1855A - serine proteinase 835 46.95 0 1045492..1046916 - 474 110667811 gcvT HQ1856A - aminomethyltransferase, glycin cleavage system T protein 836 46.67 0 1047700..1047849 - 49 110667812 - HQ1858A - IS200-type transposase (nonfunctional,N-terminal part) 837 55.38 +1 1048040..1049350 + 436 110667813 - HQ1859A - IS1341-type transposase 838 40.91 -2 1049381..1049512 + 43 110667814 - HQ1860A - hypothetical protein 839 44.44 -1 1050093..1050758 - 221 110667815 - HQ1861A - DNA binding protein, transcriptional regulator 840 50.00 0 1051242..1052381 + 379 110667816 nifS HQ1862A - cysteine desulfurase, class V aminotransferase 841 50.45 0 1052452..1053117 - 221 110667817 - HQ1863A - DNA binding protein, bacterio-opsin activator-like 842 49.65 0 1053417..1054427 + 336 110667818 brp HQ1864A - bop gene expression regulator 843 43.46 -1 1054592..1054897 - 101 110667819 - HQ1865A - hypothetical protein 844 50.26 0 1055014..1055208 + 64 110667820 csp HQ1866A - cold shock protein 845 49.37 0 1055344..1056297 - 317 110667821 tfbA HQ1867A - transcription initiation factor TFB 846 44.15 -1 1056801..1057475 + 224 110667822 - HQ1868A - RNA methylase 847 48.13 0 1058159..1059949 - 596 110667823 - HQ1869A - rhomboid family protein/intramembrane serine protease 848 40.86 -2 1059983..1060261 - 92 110667824 - HQ1870A - hypothetical protein 849 43.81 -1 1060319..1060528 - 69 110667825 - HQ1871A - hypothetical protein 850 49.68 0 1060848..1062572 + 574 110667826 menF HQ1872A - isochorismate synthase 851 49.30 0 1062572..1064431 + 619 110667827 menD HQ1873A - 2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 852 49.56 0 1064560..1065477 + 305 110667828 menB HQ1874A - naphthoate synthase 853 49.69 0 1065619..1066578 + 319 110667829 menA HQ1875A - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 854 48.73 0 1066578..1067681 + 367 110667830 menC HQ1876A - O-succinylbenzoate-CoA synthase (OSB synthase; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase) 855 44.72 -1 1068020..1068862 - 280 110667831 - HQ1877A - hypothetical protein 856 43.76 -1 1069476..1070012 - 178 110667832 pyrI HQ1878A - aspartate carbamoyltransferase regulatory subunit 857 48.42 0 1070009..1070923 - 304 110667833 pyrB HQ1879A - aspartate carbamoyltransferase catalytic subunit 858 48.33 0 1071120..1072379 - 419 110667834 gdhA HQ1880A - glutamate dehydrogenase (NADP+) 859 48.62 0 1072493..1073434 - 313 110667835 fbp HQ1881A - fructose-1,6-bisphosphatase 860 47.06 0 1073681..1073986 + 101 110667836 - HQ1882A - hypothetical protein 861 44.01 -1 1074198..1074656 - 152 110667837 - HQ1883A - hypothetical protein 862 48.55 0 1074780..1075640 - 286 110667838 ubiA HQ1884A - prenyltransferase 863 55.69 +1 1075972..1076463 + 163 110667839 - HQ1885A - hypothetical protein 864 47.32 0 1076615..1077136 + 173 110667840 mtfK1 HQ1886A - FKBP-type peptidylprolyl isomerase 1 865 39.54 -2 1078117..1078422 + 101 110667841 - HQ1887A - hypothetical protein 866 51.18 0 1079505..1080311 + 268 110667842 kch HQ1888A - Kef-type K+ transporter NAD-binding component 867 60.04 +2 1082006..1083001 - 331 110667843 - HQ1889A - hypothetical protein 868 57.53 +2 1083470..1083907 + 145 110667844 - HQ1890A - hypothetical protein 869 55.68 +1 1085776..1086585 - 269 110667845 udp HQ1892A - uridine phosphorylase 870 48.99 0 1088988..1089332 + 114 110667846 - HQ1893A - hypothetical protein 871 62.25 +2 1089657..1090358 - 233 110667847 - HQ1894A - hypothetical protein 872 58.33 +2 1090563..1090826 - 87 110667848 - HQ1895A - hypothetical protein 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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