version 1.0
Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 215 48.37 0 310541..311092 + 183 110667191 - HQ1221A - hypothetical protein 216 50.57 0 311119..312087 - 322 110667192 - HQ1222A - hypothetical protein 217 50.54 0 312287..312658 + 123 110667193 - HQ1223A - hypothetical protein 218 46.04 0 312943..313548 + 201 110667194 - HQ1224A - protease 219 47.96 0 313928..314932 - 334 110667195 - HQ1225A - sodium/arsenite symporter family protein 220 47.44 0 315361..316629 - 422 110667196 - HQ1226A - hypothetical protein 221 49.39 0 316777..317766 - 329 110667197 tfbA HQ1227A - transcription initiation factor TFB 222 51.09 0 317977..318573 + 198 110667198 rnhA HQ1228A - ribonuclease H I 223 42.50 -1 319258..319617 - 119 110667199 padR HQ1230A - transcription regulator 224 46.25 0 319761..320294 + 177 110667200 ipp HQ1231A - inorganic pyrophosphatase 225 42.86 -1 320415..320561 + 48 110667201 - HQ1232A - hypothetical protein 226 49.95 0 320798..321718 + 306 110667202 - HQ1233A - rhomboid family protein/GlpG-like protein 227 47.40 0 321732..322577 + 281 110667203 nfi HQ1234A - endonuclease V (deoxyinosine 3'endonuclease) 228 48.48 0 322826..323683 + 285 110667204 - HQ1235A - short chain dehydrogenase/ reductase 229 50.63 0 323862..325127 - 421 110667205 arsA HQ1236A - transport ATPase ( substrate arsenite) 230 47.86 0 325208..326329 - 373 110667206 aspC HQ1237A - PLP-dependent aminotransferase ( aspartate aminotransferase) 231 49.90 0 326649..327167 + 172 110667207 cinA HQ1238A - CinA-like domain-containing protein 232 43.71 -1 327354..327941 + 195 110667208 - HQ1239A - hypothetical protein 233 46.47 0 328105..328911 - 268 110667209 - HQ1240A - hypothetical protein 234 48.12 0 329301..329753 - 150 110667210 nusG HQ1241A - transcription antitermination protein NusG 235 43.68 -1 329760..329933 - 57 110667211 secE HQ1242A - preprotein translocase subunit SecE 236 50.72 0 330405..331721 - 438 110667212 ftsZ HQ1243A - cell division protein FtsZ 237 48.63 0 331955..333529 - 524 110667213 - HQ1244A - hypothetical protein 238 48.23 0 333818..334636 + 272 110667214 aroE HQ1245A - shikimate 5-dehydrogenase 239 48.99 0 334956..335798 + 280 110667215 - HQ1246A - hypothetical protein 240 48.70 0 335795..336718 + 307 110667216 ilvE HQ1247A - branched-chain amino acid aminotransferase 241 45.69 0 336773..337201 + 142 110667217 - HQ1248A - homolog to Rieske iron sulfur protein 242 44.73 -1 337547..338020 - 157 110667218 - HQ1249A - GtrA-like family protein, cell surface polysaccharide biosynthesis protein 243 47.98 0 338023..339087 - 354 110667219 - HQ1250A - glycosyl tranferase; dolichyl-phosphate beta-glucosyltransferase 244 48.41 0 339376..341895 + 839 110667220 - HQ1251A - hypothetical protein 245 46.51 0 341900..342157 - 85 110667221 - HQ1252A - hypothetical protein 246 46.81 0 342278..342559 + 93 110667222 rpl44e HQ1253A - 50S ribosomal protein L44e 247 47.81 0 342563..342790 + 75 110667223 rps27e HQ1254A - 30S ribosomal protein S27e 248 46.69 0 342888..343688 + 266 110667224 tif2a HQ1255A - translation initiation factor IF-2 subunit alpha 249 45.36 0 343813..343995 + 60 110667225 - HQ1256A - H/ACA RNA-protein complex component Nop10p 250 48.62 0 344000..344758 + 252 110667226 - HQ1257A - hypothetical protein 251 48.43 0 345472..345948 + 158 110667227 - HQ1258A - hypothetical protein 252 47.90 0 346446..347399 - 317 110667228 phfZ HQ1259A - phenazine biosynthesis protein 253 46.93 0 347514..348278 + 254 110667229 prt HQ1260A - phosphoribosyltransferase 254 46.81 0 348291..349247 + 318 110667230 - HQ1261A - transporter 255 46.14 0 349950..350855 + 301 110667231 mtaP HQ1262A - 5'-methylthioadenosine phosphorylase MtaP 256 47.94 0 350967..351911 - 314 110667232 - HQ1263A - smc operon protein 257 46.32 0 351904..355500 - 1198 110667233 smc HQ1264A - chromosome partition protein 258 47.22 0 355630..355953 - 107 110667234 - HQ1265A - smc operon protein 259 45.47 0 356333..357823 + 496 110667235 gatB HQ1266A - aspartyl/glutamyl-tRNA amidotransferase subunit B 260 47.79 0 358124..360697 + 857 110667236 topA HQ1267A - DNA topoisomerase I 261 45.64 0 361003..361197 - 64 110667237 csp HQ1268A - cold shock protein 262 47.78 0 361607..362326 + 239 110667238 pcrB HQ1269A - geranylgeranylglyceryl phosphate synthase-like protein 263 47.13 0 362844..364148 + 434 110667239 aspC HQ1270A - aspartyl-tRNA synthetase 264 49.73 0 364149..365063 + 304 110667240 kin HQ1271A - sugar kinase 265 49.26 0 365924..366733 + 269 110667241 - HQ1272A - hypothetical protein 266 47.70 0 367414..368415 - 333 110667242 - HQ1275A - glutathione S-transferase 267 49.89 0 368587..369510 + 307 110667243 - HQ1276A - ribulose-1,5-biphosphate synthetase 268 47.20 0 369729..370673 - 314 110667244 - HQ1277A - hypothetical protein 269 47.83 0 370670..371290 - 206 110667245 dcd HQ1278A - deoxycytidine triphosphate deaminase 270 47.20 0 372020..372358 + 112 110667246 - HQ1279A - peptidyl-tRNA hydrolase 271 46.38 0 373020..374123 + 367 110667247 - HQ1280A - signal-transducing histidine kinase/response regulator 272 46.05 0 374402..375856 + 484 110667248 truD HQ1281A - tRNA pseudouridine synthase D 273 50.21 0 376496..377218 + 240 110667249 - HQ1282A - hypothetical protein 274 50.18 0 377461..377739 + 92 110667250 rpl37aR HQ1283A - ribosomal protein L37a.eR 275 45.93 0 377755..377889 + 44 110667251 rpoP HQ1284A - DNA-directed RNA polymerase subunit P 276 44.60 -1 378104..378520 + 138 110667252 - HQ1285A - rpo operon protein 277 51.03 0 378743..379132 + 129 110667253 pfdB HQ1286A - prefoldin beta subunit 278 48.07 0 379125..379409 + 94 110667254 - HQ1287A - hypothetical protein 279 47.90 0 379628..381535 - 635 110667255 - HQ1288A - hypothetical protein 280 50.27 0 381564..382118 - 184 110667256 guaAa HQ1289A - GMP synthase subunit A 281 48.79 0 382589..383248 - 219 110667257 - HQ1290A - hypothetical protein 282 44.72 -1 383599..383958 + 119 110667258 - HQ1291A - hypothetical protein 283 50.75 0 384154..385749 + 531 110667259 leuA HQ1292A - (R)-citramalate synthase 284 47.97 0 385877..386245 + 122 110667260 - HQ1293A - hypothetical protein 285 51.63 0 387006..387464 - 152 110667261 - HQ1294A - hypothetical protein 286 46.60 0 387564..388769 + 401 110667262 - HQ1295A - ABC-type transport system, ATP-binding protein 287 47.91 0 388766..389602 + 278 110667263 - HQ1296A - ABC-type transport system, permease protein 288 50.13 0 389711..390103 - 130 110667264 - HQ1297A - hypothetical protein 289 48.64 0 390242..391633 + 463 110667265 phr HQ1298A - deoxyribodipyrimidine photolyase 290 47.83 0 391786..392454 + 222 110667266 - HQ1299A - F420-dependent NADP reductase 291 44.55 -1 392726..393028 - 100 110667267 hisE HQ1300A - phosphoribosyl-ATP pyrophosphatase 292 49.19 0 393222..393839 - 205 110667268 hisH HQ1301A - glutamine amidotransferase subunit PdxT 293 46.06 0 393964..394128 - 54 110667269 secG HQ1302A - preprotein translocase subunit SecG 294 44.35 -1 395239..395583 + 114 110667270 - HQ1303A - hypothetical protein 295 46.05 0 395983..396627 - 214 110667271 - HQ1304A - hypothetical protein 296 48.13 0 396804..397310 + 168 110667272 - HQ1305A - hypothetical protein 297 49.45 0 397452..398723 - 423 110667273 dppF HQ1306A - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein II 298 51.37 0 398720..400105 - 461 110667274 dppD HQ1307A - ABC-type dipeptide/oligopeptide/nickel transport system, ATPase protein I 299 50.05 0 400110..401132 - 340 110667275 dppC HQ1308A - ABC-type dipeptide/oligopeptide/nickel transport system, permease protein II 300 50.10 0 401132..402139 - 335 110667276 dppB HQ1309A - ABC-type dipeptide/oligopeptide/nickel transport system, permease protein I 301 50.21 0 402140..403792 - 550 110667277 dppA HQ1310A - ABC-type dipeptide/oligopeptide/nickel transport system, substrate binding protein 302 47.18 0 403949..404338 + 129 110667278 - HQ1311A - hypothetical protein 303 51.01 0 404910..405650 + 246 110667279 - HQ1312A - hypothetical protein 304 52.10 0 405778..407232 + 484 110667280 cat2 HQ1313A - cationic amino acid transport protein 305 55.11 +1 407292..407957 + 221 110667281 trkA HQ1314A - Trk-type potassium transport system, NAD-binding subunit 306 51.16 0 408196..408885 + 229 110667282 asnC HQ1315A - transcriptional regulator 307 49.09 0 408949..409386 - 145 110667283 - HQ1316A - IS200-type transposase 308 53.90 +1 409406..410353 + 315 110667284 - HQ1317A - IS1341-type transposase (nonfunctional,N-terminal part) 309 54.50 +1 410354..410764 + 136 110667285 - HQ1317B - IS1341-type transposase (nonfunctional,C-terminal part) 310 52.61 0 411986..412426 - 146 110667286 act HQ1319A - acyl-CoA thioester hydrolase 311 45.35 0 413660..414283 - 207 110667287 - HQ1321A - hypothetical protein 312 44.83 -1 415018..415800 - 260 110667288 - HQ1322A - hypothetical protein 313 40.15 -2 416508..416771 + 87 110667289 trxA HQ1323A - thioredoxin 314 44.00 -1 417121..417270 + 49 110667290 rpl40e HQ1324A - 50S ribosomal protein L40e 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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