version 1.0
Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2320 50.81 0 2790415..2791095 - 226 110669296 tif6 HQ3422A - translation initiation factor IF-6 2321 54.84 +1 2791097..2791375 - 92 110669297 rpl31R HQ3423A - 50S ribosomal protein L31e 2322 46.41 0 2791378..2791530 - 50 110669298 rpl39e HQ3424A - 50S ribosomal protein L39e 2323 49.12 0 2791778..2792518 + 246 110669299 - HQ3425A - TPR repeat-containing protein 2324 46.24 0 2792515..2792979 + 154 110669300 - HQ3426A - hypothetical protein 2325 47.90 0 2793144..2794427 + 427 110669301 nifS HQ3427A - cysteine desulfurase, class V aminotransferase 2326 44.12 -1 2794571..2794987 + 138 110669302 nifU HQ3428A - homolog to nitrogen fixation protein NifU 2327 46.80 0 2795867..2796898 - 343 110669303 radA HQ3429A - DNA repair and recombination protein RadA 2328 49.83 0 2797297..2797902 - 201 110669304 - HQ3430A - hypothetical protein 2329 48.97 0 2797932..2798801 - 289 110669305 htpX HQ3431A - heat shock protein HtpX 2330 52.71 +1 2799525..2800391 + 288 110669306 - HQ3432A - IS1341-type transposase (nonfunctional,N-terminal part) 2331 47.82 0 2801969..2803114 + 381 110669307 - HQ3435A - posible NMD protein affecting ribosome stability and mRNA decay 2332 48.17 0 2804448..2806193 - 581 110669308 dinG HQ3436A - Rad3-related DNA helicases DinG 2333 48.53 0 2806303..2806506 - 67 110669309 - HQ3437A - hypothetical protein 2334 46.88 0 2806905..2807642 + 245 110669310 - HQ3438A - hypothetical protein 2335 47.49 0 2808107..2809102 + 331 110669311 - HQ3439A - hypothetical protein 2336 46.80 0 2809168..2809464 - 98 110669312 - HQ3440A - hypothetical protein 2337 49.39 0 2809588..2810403 + 271 110669313 - HQ3441A - hypothetical protein 2338 44.32 -1 2811415..2811933 - 172 110669314 - HQ3442A - hypothetical protein 2339 48.83 0 2812044..2813030 + 328 110669315 hemB HQ3443A - delta-aminolevulinic acid dehydratase 2340 50.18 0 2813317..2814729 + 470 110669316 amtB HQ3444A - ammonium transporter 2341 48.76 0 2814722..2815084 + 120 110669317 glnK HQ3445A - nitrogen regulatory protein P-II 2342 48.15 0 2815258..2815446 - 62 110669318 - HQ3446A - hypothetical protein 2343 48.40 0 2815728..2817068 + 446 110669319 hemL HQ3447A - glutamate-1-semialdehyde 2,1-aminomutase 2344 52.78 +1 2817230..2818129 + 299 110669320 - HQ3448A - transposase 2345 49.28 0 2818771..2819955 + 394 110669321 hemC HQ3450A - hydroxymethylbilane synthase (porphobilinogen deaminase) 2346 47.85 0 2819962..2820774 + 270 110669322 hemX HQ3451A - uroporphyrin-III C-methyltransferase 2347 50.25 0 2820843..2821628 + 261 110669323 hemD HQ3452A - uroporphyrinogen-III synthase 2348 48.07 0 2821708..2822121 + 137 110669324 - HQ3453A - hypothetical protein 2349 48.73 0 2822424..2823722 + 432 110669325 metY HQ3454A - O-acetylhomoserine aminocarboxypropyltransferase; methionine synthase 2350 48.27 0 2824064..2825221 + 385 110669326 pitA HQ3455A - phosphate permease 2351 48.92 0 2825660..2826076 + 138 110669327 fdx HQ3457A - ferredoxin (2Fe-2S) 2352 51.27 0 2826990..2827775 - 261 110669328 - HQ3458A - hypothetical protein 2353 50.22 0 2827927..2828838 + 303 110669329 mdhA HQ3459A - malate dehydrogenase 2354 48.57 0 2829663..2830082 + 139 110669330 - HQ3460A - polA operon protein ( DNA-binding protein) 2355 46.68 0 2830085..2836954 + 2289 110669331 polA2 HQ3461A - DNA polymerase II large subunit 2356 50.45 0 2837301..2837411 + 36 110669332 - HQ3462A - hypothetical protein 2357 51.08 0 2837588..2838376 + 262 110669333 - HQ3463A - phosphatase-like protein 2358 49.78 0 2838513..2840117 - 534 110669334 aslA HQ3464A - arylsulfatase; choline-sulfatase 2359 51.61 0 2840453..2840824 - 123 110669335 - HQ3465A - NifU domain-containing protein 2360 44.15 -1 2840850..2841191 - 113 110669336 - HQ3466A - hypothetical protein 2361 48.29 0 2842067..2848306 - 2079 110669337 hmu3 HQ3467A - cell surface glycoprotein 2362 47.64 0 2848443..2849924 - 493 110669338 - HQ3468A - cell surface glycoprotein 2363 43.66 -1 2849973..2851493 - 506 110669339 - HQ3469A - cell surface glycoprotein 2364 53.48 +1 2853023..2853712 + 229 110669340 - HQ3472A - transposase 2365 43.09 -1 2854534..2855661 + 375 110669341 - HQ3473A - hypothetical protein 2366 46.76 0 2855651..2856715 + 354 110669342 moxR HQ3474A - MoxR-like ATPase (methanol dehydrogenase regulatory protein) 2367 43.12 -1 2857167..2857442 + 91 110669343 - HQ3475A - hypothetical protein 2368 50.61 0 2857731..2858951 - 406 110669344 lolE HQ3476A - ABC transporter permease 2369 50.94 0 2858948..2860225 - 425 110669345 lolC HQ3477A - ABC transporter permease 2370 52.48 0 2860218..2860964 - 248 110669346 lolD HQ3478A - ABC transporter ATP-binding protein LolDE 2371 47.70 0 2861027..2863282 - 751 110669347 - HQ3479A - extracellular mucin like protein 2372 51.32 0 2863502..2865124 + 540 110669348 - HQ3480A - hypothetical protein 2373 53.23 +1 2865183..2865740 + 185 110669349 - HQ3481A - hypothetical protein 2374 48.19 0 2865737..2866759 + 340 110669350 - HQ3482A - hypothetical protein 2375 50.81 0 2867030..2867521 + 163 110669351 mutT HQ3483A - Mut/nudix family protein 2376 58.23 +2 2867762..2869006 - 414 110669352 - HQ3484A - IS1341-type transposase 2377 50.45 0 2870774..2871334 - 186 110669353 - HQ3485A - hypothetical protein 2378 52.72 +1 2871435..2871893 - 152 110669354 - HQ3486A - hypothetical protein 2379 47.26 0 2872011..2872448 - 145 110669355 - HQ3487A - hypothetical protein 2380 46.51 0 2872479..2872607 + 42 110669356 - HQ3488A - hypothetical protein 2381 55.30 +1 2873103..2873366 - 87 110669357 - HQ3491A - transcription regulator 2382 53.67 +1 2873708..2874007 - 99 110669358 - HQ3493A - hypothetical protein 2383 55.56 +1 2873994..2874686 - 230 110669359 - HQ3494A - hypothetical protein 2384 58.97 +2 2875560..2875832 + 90 110669360 - HQ3496A - transcriptional regulator 2385 57.99 +2 2875829..2876266 + 145 110669361 - HQ3497A - hypothetical protein 2386 57.42 +2 2877216..2877734 + 172 110669362 - HQ3499A - hypothetical protein 2387 57.81 +2 2877749..2878222 + 157 110669363 - HQ3500A - hypothetical protein 2388 62.83 +2 2878736..2879152 + 138 110669364 - HQ3501A - hypothetical protein 2389 55.56 +1 2879666..2879809 + 47 110669365 - HQ3502A - hypothetical protein 2390 50.16 0 2881247..2882488 + 413 110669366 - HQ3503A - glycosyltransferase ( dolichyl-P-glucose synthetase) 2391 46.41 0 2883567..2884025 + 152 110669367 - HQ3505A - hypothetical protein 2392 48.90 0 2884018..2884518 + 166 110669368 - HQ3506A - hypothetical protein 2393 48.02 0 2885196..2885951 - 251 110669369 graD HQ3507A - sugar nucleotidyltransferase II ( glucose-1-phosphate thymidylyltransferase) 2394 50.57 0 2886554..2887075 + 173 110669370 nudF HQ3508A - ADP-ribose pyrophosphatase 2395 50.69 0 2887551..2888570 - 339 110669371 galE HQ3509A - nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) 2396 48.55 0 2888567..2889604 - 345 110669372 galE HQ3510A - nucleoside-diphosphate-sugar epimerase ( UDP-glucose 4-epimerase) 2397 38.19 -2 2889693..2890700 + 335 110669373 - HQ3511A - hypothetical protein 2398 35.98 -2 2890722..2891705 + 327 110669374 - HQ3512A - SAM-dependent methyltransferase 2399 44.38 -1 2891788..2892339 - 183 110669375 - HQ3513A - hypothetical protein 2400 43.94 -1 2892346..2892477 - 43 110669376 - HQ3514A - hypothetical protein 2401 59.46 +2 2893502..2893723 - 73 110669377 - HQ3515A - hypothetical protein 2402 53.08 +1 2893930..2894319 - 129 110669378 - HQ3516A - ISH3-type transposase (fragment) 2403 40.95 -2 2894825..2895415 - 196 110669379 gpmB HQ3517A - fructose-2,6-bisphosphatase; phosphoglyceromutase,type 2 2404 39.17 -2 2895420..2896139 - 239 110669380 neuA HQ3518A - acylneuraminate cytidylyltransferase 2405 40.90 -2 2896147..2897322 - 391 110669381 neuB HQ3519A - sialic acid synthase (N-acetylneuraminate synthase) (N-acetylneuraminic acid synthase) (N-acetylneuraminate-9-phosphate synthase) (N-acetylneuraminic acid phosphate synthase) 2406 52.69 +1 2897823..2898194 - 123 110669382 - HQ3520A - transposase (ISH5) 2407 49.12 0 2898266..2898436 - 56 110669383 - HQ3521A - transposase (ISH5) (fragment) 2408 33.12 -2 2898735..2899682 - 315 110669384 - HQ3522A - hypothetical protein 2409 43.95 -1 2901959..2903107 - 382 110669385 - HQ3524A - protein transglucosylase 2410 41.82 -1 2903292..2903621 - 109 110669386 - HQ3525A - hypothetical protein 2411 37.16 -2 2904305..2905141 - 278 110669387 bcbD HQ3526A - capsular protein 2412 58.47 +2 2905291..2905827 - 178 110669388 - HQ3527A - ISH9-type transposase (nonfunctional, C-terminal part) 2413 53.82 +1 2905828..2906115 - 95 110669389 - HQ3527B - ISH9-type transposase (nonfunctional, N-terminal part) 2414 51.67 0 2906609..2907862 + 417 110669390 - HQ3528A - transposase (ISH8/ISH26) 2415 38.06 -2 2908258..2908659 - 133 110669391 - HQ3529A - sulfatase 2416 39.98 -2 2908723..2909640 - 305 110669392 - HQ3530A - hypothetical protein 2417 38.16 -2 2910320..2911210 - 296 110669393 - HQ3531A - hypothetical protein 2418 43.19 -1 2911468..2912664 + 398 110669394 - HQ3532A - hexosyltransferase; glycosyltransferase 2419 47.31 0 2913009..2914811 + 600 110669395 - HQ3533A - ABC-type multidrug/lipid transport system,permease and ATP-binding protein 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0