version 1.0
Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2209 47.05 0 2662918..2663595 - 225 110669185 phoU HQ3307A - ABC transport system regulatory protein 2210 46.41 0 2663962..2664963 + 333 110669186 phoU HQ3308A - ABC transport system regulatory protein 2211 45.50 0 2665297..2665674 - 125 110669187 rps8R HQ3309A - 30S ribosomal protein S8e 2212 46.75 0 2665788..2666249 + 153 110669188 - HQ3310A - hypothetical protein 2213 49.31 0 2666753..2670019 - 1088 110669189 carB HQ3311A - carbamoyl phosphate synthase large subunit 2214 48.21 0 2670150..2670680 - 176 110669190 - HQ3312A - hypothetical protein 2215 42.46 -1 2670875..2671126 - 83 110669191 - HQ3313A - hypothetical protein 2216 45.57 0 2671184..2671510 - 108 110669192 - HQ3314A - hypothetical protein 2217 46.25 0 2671920..2672399 - 159 110669193 fxsA HQ3315A - FxsA 2218 49.04 0 2672528..2674246 + 572 110669194 - HQ3316A - hypothetical protein 2219 46.88 0 2674712..2675641 - 309 110669195 - HQ3317A - GTP cyclohydrolase 2220 48.98 0 2675836..2676327 - 163 110669196 - HQ3318A - hypothetical protein 2221 47.23 0 2676676..2677920 - 414 110669197 hcaD HQ3319A - ferredoxin:NAD+ oxidoreductase 2222 43.68 -1 2678204..2678812 + 202 110669198 - HQ3320A - hypothetical protein 2223 46.86 0 2679052..2680485 - 477 110669199 hemY HQ3321A - hypothetical protein 2224 52.95 +1 2680752..2681633 + 293 110669200 thrB HQ3322A - homoserine kinase 2225 51.05 0 2681986..2682894 - 302 110669201 pyroA HQ3323A - pyridoxine biosynthesis protein 2226 46.83 0 2683074..2683910 + 278 110669202 - HQ3324A - hypothetical protein 2227 46.12 0 2684111..2685064 - 317 110669203 - HQ3325A - hypothetical protein 2228 47.85 0 2685305..2686819 - 504 110669204 panF HQ3326A - sodium/pantothenate symporter 2229 51.19 0 2686812..2687063 - 83 110669205 - HQ3327A - hypothetical protein 2230 46.98 0 2687332..2689053 + 573 110669206 dnaG HQ3328A - DNA primase 2231 44.21 -1 2689456..2690025 - 189 110669207 - HQ3329A - hypothetical protein 2232 50.00 0 2690022..2691347 - 441 110669208 - HQ3330A - hypothetical protein 2233 47.13 0 2691487..2692095 + 202 110669209 uppS HQ3331A - di-trans,poly-cis-decaprenylcistransferase 2234 50.52 0 2692129..2693082 - 317 110669210 uppS HQ3332A - di-trans,poly-cis-decaprenylcistransferase 2235 42.61 -1 2693294..2693692 + 132 110669211 - HQ3333A - hypothetical protein 2236 45.99 0 2693829..2694950 + 373 110669212 nirH HQ3334A - heme biosynthesis protein nirH/G (nirL/nirD homolog) 2237 51.19 0 2695051..2695722 + 223 110669213 cysG HQ3335A - siroheme synthase 2238 48.79 0 2695719..2697083 + 454 110669214 hemA HQ3336A - glutamyl-tRNA reductase 2239 48.15 0 2698501..2698635 - 44 110669215 - HQ3339A - hypothetical protein 2240 45.33 0 2698694..2698843 + 49 110669216 - HQ3340A - IS200-type transposase (nonfunctional,N-terminal part) 2241 42.75 -1 2699409..2699684 + 91 110669217 phhB HQ3342A - pterin-4-alpha-carbinolamine dehydratase 2242 47.83 0 2699727..2700464 + 245 110669218 pgp HQ3343A - phosphatase 2243 50.79 0 2700569..2702458 - 629 110669219 moeA HQ3344A - molybdenum cofactor biosynthesis protein MoeA 2244 50.37 0 2702455..2703804 - 449 110669220 moeA HQ3345A - molybdenum cofactor biosynthesis protein MoeA 2245 54.01 +1 2703998..2704384 + 128 110669221 hsp20 HQ3346A - hsp20 type chaperone 2246 46.40 0 2704408..2706075 + 555 110669222 ubiB HQ3347A - ubiquinone biosynthesis transmembrane protein 2247 46.93 0 2706236..2706610 + 124 110669223 tif5A HQ3348A - translation initiation factor IF-5A 2248 50.12 0 2706625..2707452 + 275 110669224 speB HQ3349A - agmatinase 2249 50.50 0 2707844..2708641 - 265 110669225 surE HQ3350A - acid phosphatase 2250 47.49 0 2708857..2710488 - 543 110669226 - HQ3351A - tyrA operon protein 2251 50.19 0 2710485..2711255 - 256 110669227 tyrA HQ3352A - prephenate dehydrogenase 2252 46.78 0 2711454..2712695 - 413 110669228 pepQ HQ3353A - Xaa-Pro aminopeptidase 2253 47.09 0 2713064..2713492 - 142 110669229 lrp HQ3354A - transcription regulator 2254 46.86 0 2713574..2714512 - 312 110669230 porB HQ3355A - pyruvate--ferredoxin oxidoreductase, beta subunit 2255 48.34 0 2714515..2716413 - 632 110669231 porA HQ3356A - pyruvate--ferredoxin oxidoreductase, alpha subunit 2256 49.65 0 2716917..2718068 - 383 110669232 aroC HQ3357A - chorismate synthase 2257 49.27 0 2718330..2719628 - 432 110669233 aroA HQ3358A - 3-phosphoshikimate 1-carboxyvinyltransferase 2258 49.85 0 2720967..2722304 + 445 110669234 polIVy HQ3359A - DNA polymerase IV 2259 49.92 0 2722461..2723105 - 214 110669235 tpiA HQ3360A - triosephosphate isomerase 2260 49.44 0 2723249..2723782 - 177 110669236 - HQ3361A - transcriptional regulator 2261 50.57 0 2723842..2724456 - 204 110669237 pgsA HQ3362A - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2262 47.37 0 2724511..2725023 - 170 110669238 - HQ3363A - nucleotide kinase 2263 49.34 0 2725020..2726150 - 376 110669239 hisC HQ3364A - histidinol-phosphate aminotransferase 2264 49.72 0 2726735..2728369 - 544 110669240 - HQ3365A - oxidoreductase-like protein 2265 47.57 0 2728362..2728979 - 205 110669241 - HQ3366A - hypothetical protein 2266 47.95 0 2729469..2730200 - 243 110669242 hcpE HQ3367A - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase 2267 45.80 0 2730408..2731121 + 237 110669243 - HQ3368A - hypothetical protein 2268 48.41 0 2731860..2731985 - 41 110669244 - HQ3369A - putative transposase 2269 55.23 +1 2732267..2733079 - 270 110669245 - HQ3370A - transposase homolog (ISHnew96) 2270 46.62 0 2733465..2734277 - 270 110669246 pho HQ3371A - sugar phosphatase 2271 46.00 0 2734808..2735257 + 149 110669247 - HQ3372A - hypothetical protein 2272 47.31 0 2735919..2736383 - 154 110669248 cumB HQ3374A - cytosine/adenosine deaminases 2273 45.52 0 2736485..2737477 - 330 110669249 nuc HQ3375A - endonuclease staphylococcal nuclease-like 2274 41.67 -1 2737628..2737951 - 107 110669250 - HQ3376A - hypothetical protein 2275 42.19 -1 2738131..2738322 + 63 110669251 - HQ3377A - hypothetical protein 2276 53.70 +1 2738784..2738837 - 17 110669252 - HQ3378C - IS1341-type transposase (nonfunctional, central part) 2277 52.00 0 2739640..2739714 + 24 110669253 - HQ3379B - IS200-type transposase (nonfunctional,C-terminal part) 2278 47.45 0 2739788..2740609 - 273 110669254 potC HQ3380A - ABC-type spermidine/putrescine transport system,permease protein II 2279 44.55 -1 2740726..2741661 - 311 110669255 potB HQ3381A - ABC-type spermidine/putrescine transport system,permease protein I 2280 47.17 0 2741664..2742986 - 440 110669256 potA HQ3382A - ABC-type spermidine/putrescine transport system,ATP-binding protein 2281 48.31 0 2742989..2744050 - 353 110669257 potD HQ3383A - ABC-type spermidine/putrescine transport system,substrate-binding protein 2282 53.07 +1 2745094..2745402 - 102 110669258 rps10p HQ3384A - 30S ribosomal protein S10P 2283 49.61 0 2745403..2746668 - 421 110669259 tef1a HQ3385A - elongation factor 1-alpha 2284 51.08 0 2746996..2747970 - 324 110669260 hom HQ3386A - homoserine dehydrogenase 2285 50.58 0 2747972..2748742 - 256 110669261 - HQ3387A - allosteric regulator of homoserine dehydrogenase 2286 48.81 0 2749060..2751249 - 729 110669262 tef2 HQ3388A - elongation factor EF-2 2287 49.83 0 2751655..2752539 + 294 110669263 - HQ3389A - hypothetical protein 2288 46.78 0 2752662..2753345 - 227 110669264 rps7 HQ3390A - 30S ribosomal protein S7P 2289 49.18 0 2753347..2753775 - 142 110669265 rps12P HQ3391A - 30S ribosomal protein S12P 2290 47.99 0 2754036..2754458 - 140 110669266 nusA HQ3392A - transcription elongation factor NusA-like protein 2291 48.01 0 2754613..2756526 - 637 110669267 rpoA2 HQ3393A - DNA-directed RNA polymerase subunit A'' (subunit C) 2292 49.17 0 2756519..2759455 - 978 110669268 rpoA HQ3394A - DNA-directed RNA polymerase subunit alpha 2293 49.56 0 2759574..2761409 - 611 110669269 rpoB1 HQ3395A - DNA-directed RNA polymerase subunit B' 2294 47.59 0 2761641..2763218 - 525 110669270 rpoB2 HQ3396A - DNA-directed RNA polymerase subunit beta'' 2295 48.25 0 2763215..2763442 - 75 110669271 rpoH HQ3397A - DNA-directed RNA polymerase subunit H 2296 48.48 0 2763671..2764720 - 349 110669272 - HQ3398A - RIO-like serine/threonine protein kinase II 2297 53.95 +1 2764717..2765007 - 96 110669273 tif1A1 HQ3399A - translation initiation factor IF-1A 2298 46.81 0 2765505..2766506 - 333 110669274 tyrS HQ3400A - tyrosyl-tRNA synthetase 2299 46.06 0 2766673..2767002 + 109 110669275 - HQ3401A - hypothetical protein 2300 50.28 0 2767683..2769665 - 660 110669276 - HQ3402A - hypothetical protein 2301 49.53 0 2769993..2770949 - 318 110669277 elaC HQ3403A - ribonuclease Z (RNase Z) (tRNA 3 endonuclease) 2302 45.52 0 2771238..2771516 + 92 110669278 - HQ3404A - hypothetical protein 2303 48.71 0 2771553..2772677 + 374 110669279 rfcC HQ3405A - replication factor C small subunit 2 2304 47.33 0 2772688..2773323 + 211 110669280 psd HQ3406A - phosphatidylserine decarboxylase 2305 48.19 0 2773313..2774416 - 367 110669281 - HQ3407A - RNA methylase 2306 49.38 0 2774567..2775694 + 375 110669282 tfbA HQ3408A - transcription initiation factor TFB 2307 44.87 -1 2775691..2776080 + 129 110669283 - HQ3409A - hypothetical protein 2308 45.10 0 2776154..2776714 + 186 110669284 tbpE HQ3410A - transcription factor 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0