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Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1772 48.20 0 2150200..2150811 - 203 110668748 - HQ2850A - translation initiation factor IF-2 subunit beta 1773 45.45 0 2151392..2151622 - 76 110668749 - HQ2851A - hypothetical protein 1774 48.98 0 2151812..2152936 - 374 110668750 dhs HQ2852A - putative deoxyhypusine synthase 1775 46.82 0 2153558..2154328 - 256 110668751 nif3 HQ2853A - hypothetical protein 1776 48.00 0 2154525..2156276 - 583 110668752 - HQ2854A - hypothetical protein 1777 46.83 0 2156386..2156637 - 83 110668753 - HQ2855A - hypothetical protein 1778 44.68 -1 2156640..2157767 - 375 110668754 - HQ2856A - hypothetical protein 1779 47.93 0 2158212..2159081 - 289 110668755 sucD HQ2857A - succinate--CoA ligase, alpha subunit (ADP-forming) 1780 47.38 0 2159078..2160223 - 381 110668756 sucC HQ2858A - succinate--CoA ligase beta subunit (ADP-forming) 1781 47.87 0 2160650..2166379 + 1909 110668757 nrdA HQ2859A - ribonucleoside-diphosphate reductase alpha subunit (intein-containing) 1782 49.47 0 2167497..2168537 + 346 110668758 crtB HQ2860A - geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) 1783 47.47 0 2168848..2169696 - 282 110668759 - HQ2861A - carotenoid biosynthesis protein 1784 46.00 0 2169689..2170564 - 291 110668760 ubiA HQ2862A - prenyltransferase 1785 47.04 0 2170580..2172082 - 500 110668761 crtI HQ2863A - phytoene dehydrogenase (phytoene desaturase) 1786 46.32 0 2172438..2172845 + 135 110668762 - HQ2864A - stress response protein 1787 47.27 0 2173253..2173912 + 219 110668763 - HQ2865A - hypothetical protein 1788 48.30 0 2173937..2174791 + 284 110668764 - HQ2866A - metalloenzyme, TatD related DNAse 1789 46.77 0 2175279..2175866 + 195 110668765 - HQ2867A - hypothetical protein 1790 46.49 0 2176203..2177669 + 488 110668766 mvaB HQ2868A - hydroxymethylglutaryl-CoA synthase 1791 49.09 0 2178030..2178740 - 236 110668767 - HQ2869A - transcriptional regulator 1792 48.65 0 2178991..2179695 + 234 110668768 - HQ2870A - hypothetical protein 1793 46.63 0 2179800..2180393 + 197 110668769 - HQ2871A - acetyltransferase 1794 47.84 0 2180530..2181039 + 169 110668770 - HQ2872A - hypothetical protein 1795 49.07 0 2181109..2182347 - 412 110668771 alaS HQ2873A - alanine--tRNA ligase 1796 51.74 0 2182489..2183004 - 171 110668772 - HQ2874A - transcriptional regulator 1797 55.69 +1 2184972..2185226 - 84 110668773 - HQ2876A - hypothetical protein 1798 41.00 -2 2185884..2186444 + 186 110668774 - HQ2877A - hypothetical protein 1799 49.72 0 2186574..2187464 + 296 110668775 ksgA HQ2878A - dimethyladenosine transferase 1800 48.51 0 2187461..2188099 + 212 110668776 hemK HQ2879A - protein methyltransferase 1801 46.74 0 2188161..2189234 + 357 110668777 metE HQ2880A - 5-methyltetrahydropteroyltriglutamate--homocyste ine S-methyltransferase, methionine synthase II 1802 47.76 0 2189234..2190328 + 364 110668778 metE HQ2881A - methionine synthase 1803 49.27 0 2190523..2190999 - 158 110668779 ndk HQ2882A - nucleoside-diphosphate kinase 1804 49.48 0 2190996..2191187 - 63 110668780 rpl24R HQ2883A - ribosomal protein L24.eR 1805 49.78 0 2191191..2191415 - 74 110668781 rps28e HQ2884A - 30S ribosomal protein S28e 1806 48.76 0 2191422..2191784 - 120 110668782 rpl7ae HQ2885A - 50S ribosomal protein L7Ae 1807 49.38 0 2192204..2192689 + 161 110668783 - HQ2886A - hypothetical protein 1808 50.54 0 2193132..2193776 - 214 110668784 - HQ2887A - hypothetical protein 1809 48.84 0 2193804..2195564 - 586 110668785 gltX HQ2888A - glutamyl-tRNA synthetase 1810 49.57 0 2195740..2196786 - 348 110668786 idsA HQ2889A - trifunctional short-chain (E)-prenyl diphosphate synthase ( dimethylallyltransferase / geranyltranstransferase / farnesytranstransferase) 1811 45.90 0 2196788..2198140 - 450 110668787 - HQ2890A - hydrolase 1812 46.58 0 2198718..2198951 + 77 110668788 - HQ2891A - small nuclear ribonucleoprotein (snRNP)-like protein 1813 46.89 0 2198948..2199124 + 58 110668789 rpl37e HQ2892A - 50S ribosomal protein L37e 1814 49.24 0 2199832..2201811 + 659 110668790 purF HQ2893A - amidophosphoribosyltransferase 1815 46.97 0 2201952..2202677 - 241 110668791 - HQ2894A - hypothetical protein 1816 43.70 -1 2202711..2203067 - 118 110668792 rpoF HQ2895A - DNA-directed RNA polymerase subunit F 1817 48.80 0 2203180..2203470 - 96 110668793 rpl21R HQ2896A - 50S ribosomal protein L21e 1818 53.26 +1 2203593..2203868 + 91 110668794 - HQ2897A - hypothetical protein 1819 51.31 0 2204049..2204315 - 88 110668795 ef1B HQ2898A - elongation factor 1-beta 1820 48.89 0 2204318..2204497 - 59 110668796 - HQ2899A - Zn-ribbon RNA-binding protein 1821 51.99 0 2204680..2206035 - 451 110668797 - HQ2900A - hypothetical protein 1822 52.46 0 2206263..2206607 - 114 110668798 rpl12p HQ2901A - 50S ribosomal protein L12P 1823 49.81 0 2206719..2207798 - 359 110668799 rplP0 HQ2902A - acidic ribosomal protein P0 1824 51.33 0 2207795..2208433 - 212 110668800 rpl1P HQ2903A - 50S ribosomal protein L1P 1825 49.48 0 2208732..2209022 + 96 110668801 - HQ2904A - hypothetical protein 1826 48.72 0 2209325..2210299 - 324 110668802 birA HQ2905A - biotin--[acetyl-CoA-carboxylase] ligase 1827 49.65 0 2210482..2212326 - 614 110668803 accA2 HQ2906A - biotin carboxylase 1, acyl-CoA carboxylase, alpha subunit 2 1828 49.37 0 2212609..2213643 + 344 110668804 asd HQ2908A - aspartate-semialdehyde dehydrogenase 1829 49.02 0 2213853..2214872 - 339 110668805 serA HQ2909A - phosphoglycerate dehydrogenase 1830 50.07 0 2215021..2216454 + 477 110668806 fixC HQ2910A - electron-transferring-flavoprotein dehydrogenase 1831 52.67 +1 2217345..2217587 + 80 110668807 - HQ2911A - hypothetical protein 1832 57.03 +2 2217584..2217967 + 127 110668808 - HQ2912A - integrase/recombinase 1833 51.07 0 2218223..2218549 - 108 110668809 - HQ2913A - hypothetical protein 1834 52.33 0 2218555..2218854 - 99 110668810 - HQ2914A - hypothetical protein 1835 50.72 0 2219174..2219662 + 162 110668811 - HQ2915A - cell surface glycoprotein 1836 47.59 0 2219756..2220253 - 165 110668812 - HQ2916A - hypothetical protein 1837 50.12 0 2220379..2220807 - 142 110668813 - HQ2917A - hypothetical protein 1838 46.85 0 2221406..2222515 - 369 110668814 agxT HQ2919A - aminotransferase class V (Serine--pyruvate aminotransferase 2; alanine--glyoxylate aminotransferase 2) 1839 50.00 0 2222731..2223192 + 153 110668815 msrB HQ2921A - peptide methionine sulfoxide reductase (R-form specific) 1840 48.52 0 2223449..2223922 - 157 110668816 rpl11p HQ2922A - 50S ribosomal protein L11P 1841 51.07 0 2224058..2225128 - 356 110668817 celM HQ2923A - cellulase; endo-1,3(4)-beta-glucanase 1842 41.41 -1 2225135..2225332 - 65 110668818 - HQ2924A - hypothetical protein 1843 52.11 0 2225360..2226376 + 338 110668819 mvk HQ2925A - mevalonate kinase 1844 48.93 0 2226379..2227269 + 296 110668820 - HQ2926A - amino acid kinase 1845 48.14 0 2227335..2228192 - 285 110668821 elaC HQ2927A - ribonuclease Z (RNase Z) (tRNA 3 endonuclease) 1846 48.51 0 2228324..2231209 + 961 110668822 lhr HQ2928A - ATP-dependent helicase 1847 50.09 0 2231412..2234234 - 940 110668823 dna2 HQ2930A - DNA2-like DNA replication helicase 1848 50.00 0 2234374..2234949 + 191 110668824 - HQ2931A - hypothetical protein 1849 52.44 0 2235081..2235326 + 81 110668825 - HQ2932A - hypothetical protein 1850 49.90 0 2235450..2236457 - 335 110668826 - HQ2933A - hypothetical protein 1851 50.48 0 2236677..2237516 - 279 110668827 rps2P HQ2934A - 30S ribosomal protein S2 1852 52.32 0 2237513..2238718 - 401 110668828 eno HQ2935A - phosphopyruvate hydratase 1853 52.53 0 2238721..2238918 - 65 110668829 rpoK HQ2936A - DNA-directed RNA polymerase subunit K 1854 49.23 0 2239373..2239567 - 64 110668830 rpoN HQ2937A - DNA-directed RNA polymerase subunit N 1855 52.88 +1 2239580..2239978 - 132 110668831 rps9p HQ2938A - 30S ribosomal protein S9P 1856 49.77 0 2239972..2240409 - 145 110668832 rpl13p HQ2939A - 50S ribosomal protein L13P 1857 49.57 0 2240406..2240756 - 116 110668833 rpl18R HQ2940A - 50S ribosomal protein L18e 1858 50.06 0 2241206..2241994 - 262 110668834 rpoD HQ2941A - DNA-directed RNA polymerase subunit D 1859 51.26 0 2242001..2242396 - 131 110668835 rps11p HQ2942A - 30S ribosomal protein S11P 1860 51.52 0 2242403..2242930 - 175 110668836 rps4p HQ2943A - 30S ribosomal protein S4 1861 51.72 0 2242946..2243467 - 173 110668837 rps13p HQ2944A - 30S ribosomal protein S13P 1862 49.83 0 2244015..2246123 + 702 110668838 stt3 HQ2945A - transmembrane oligosaccharyl transferase 1863 46.77 0 2246301..2246501 + 66 110668839 - HQ2946A - hypothetical protein 1864 48.37 0 2246553..2247257 - 234 110668840 guaA HQ2947A - guanosine monophosphate synthetase (glutamine-hydrolyzing) (GMP synthase) 1865 49.69 0 2247532..2248503 - 323 110668841 moaA HQ2948A - molybdenum cofactor biosynthesis protein A 1866 51.01 0 2248648..2249688 + 346 110668842 mrp HQ2949A - ATP-binding protein Mrp 1867 60.26 +2 2250432..2250962 - 176 110668843 - HQ2950A - hypothetical protein 1868 56.23 +1 2251084..2251380 - 98 110668844 - HQ2951A - hypothetical protein 1869 52.28 0 2252574..2253122 + 182 110668845 cdc6_ HQ2952A - cell division control protein 1870 52.82 +1 2253141..2253530 + 129 110668846 - HQ2953A - cell division control protein cdc6-like protein 1871 53.59 +1 2253892..2255130 + 412 110668847 - HQ2954A - IS1341-type transposase 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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