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Haloquadratum walsbyi DSM 16790, complete genome - 1..3132494 2610 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1684 40.58 -2 2065444..2065581 + 45 110668660 - HQ2759A - C2H2 zinc finger DNA-binding protein 1685 47.71 0 2065735..2066193 - 152 110668661 - HQ2760A - hypothetical protein 1686 49.40 0 2067018..2067185 - 55 110668662 - HQ2761A - hypothetical protein 1687 52.83 +1 2067252..2068169 + 305 110668663 aroK HQ2762A - shikimate kinase 1688 44.80 -1 2068249..2068623 + 124 110668664 pheA HQ2763A - chorismate mutase 1689 50.20 0 2069406..2070425 - 339 110668665 truB HQ2764A - H/ACA RNA-protein complex component Cbf5p 1690 48.53 0 2070440..2071018 - 192 110668666 cmk HQ2765A - cytidylate kinase 1691 46.28 0 2071580..2072506 - 308 110668667 - HQ2766A - hypothetical protein 1692 48.28 0 2073328..2073996 - 222 110668668 adk HQ2767A - adenylate kinase 1693 48.12 0 2074147..2074545 + 132 110668669 - HQ2768A - hypothetical protein 1694 48.37 0 2074775..2075725 + 316 110668670 ephA HQ2769A - epoxide hydrolase-related protein 1695 52.17 0 2077049..2077186 - 45 110668671 - HQ2770A - hypothetical protein 1696 48.85 0 2077362..2078102 - 246 110668672 - HQ2771A - 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) 1697 47.18 0 2078252..2078836 - 194 110668673 idiA HQ2772A - isopentenyl-diphosphate delta-isomerase 1698 43.90 -1 2079097..2079522 - 141 110668674 lrp HQ2773A - transcription regulator 1699 49.41 0 2079620..2080720 + 366 110668675 carA HQ2774A - carbamoyl phosphate synthase small subunit 1700 50.94 0 2081121..2082188 - 355 110668676 - HQ2775A - protein N-acetyltransferase 1701 49.36 0 2082219..2083547 - 442 110668677 gatD HQ2776A - glutamyl-tRNA(Gln) amidotransferase subunit D 1702 47.19 0 2084285..2084818 + 177 110668678 - HQ2778A - hypothetical protein 1703 48.26 0 2084924..2085727 - 267 110668679 - HQ2779A - transcription regulator 1704 47.11 0 2085778..2086503 - 241 110668680 - HQ2780A - hypothetical protein 1705 47.99 0 2086829..2088343 + 504 110668681 gpmA HQ2781A - phosphoglyceromutase 1706 48.58 0 2088361..2089029 - 222 110668682 - HQ2782A - hypothetical protein 1707 48.07 0 2089098..2089538 + 146 110668683 - HQ2783A - hypothetical protein 1708 42.53 -1 2089533..2089880 - 115 110668684 - HQ2784A - hypothetical protein 1709 46.82 0 2091351..2092373 - 340 110668685 - HQ2786A - hypothetical protein 1710 48.53 0 2092366..2093352 - 328 110668686 sppA HQ2787A - protease IV; endopeptidase IV; signal peptide peptidase 1711 48.23 0 2093505..2094068 + 187 110668687 - HQ2788A - phosphoglycolate phosphatase 1712 50.22 0 2094285..2094734 + 149 110668688 - HQ2789A - hypothetical protein 1713 47.01 0 2094906..2095841 - 311 110668689 folD HQ2790A - methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase 1714 49.52 0 2095993..2097240 - 415 110668690 glyA HQ2791A - glycine hydroxymethyltransferase 1715 45.45 0 2097630..2098454 + 274 110668691 - HQ2792A - hypothetical protein 1716 51.00 0 2098502..2100295 + 597 110668692 - HQ2793A - hypothetical protein 1717 47.82 0 2100441..2101586 - 381 110668693 - HQ2794A - hypothetical protein 1718 50.00 0 2101811..2102620 - 269 110668694 suhB HQ2795A - inositol-1(or 4)-monophosphatase/ fructose-1,6-bisphosphatase, type 1719 46.71 0 2102607..2103047 - 146 110668695 uspA HQ2796A - stress response protein 1720 49.72 0 2103188..2103547 + 119 110668696 - HQ2797A - hypothetical protein 1721 48.14 0 2103801..2104739 + 312 110668697 mch HQ2798A - N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase 1722 48.48 0 2104900..2106246 - 448 110668698 caaX HQ2799A - CAAX prenyl proteinase / zinc metalloproteinase 1723 51.20 0 2106602..2108230 - 542 110668699 - HQ2800A - translation elongation factor aEF-1 alpha subunit-like protein 1724 50.87 0 2108901..2109419 - 172 110668700 dnaJ HQ2801A - chaperone protein dnaJ 1725 51.98 0 2109764..2111002 + 412 110668701 - HQ2802A - hypothetical protein 1726 52.86 +1 2111152..2111361 + 69 110668702 - HQ2803A - hypothetical protein 1727 42.22 -1 2112830..2113009 + 59 110668703 - HQ2804A - hypothetical protein 1728 45.34 0 2113045..2113752 - 235 110668704 livF HQ2805A - ABC-type branched-chain amino acid transport systems, ATP-binding protein I 1729 47.09 0 2113754..2114785 - 343 110668705 livG HQ2806A - ABC-type branched-chain amino acid transport systems, ATP-binding protein II 1730 47.57 0 2114782..2116656 - 624 110668706 livM HQ2807A - ABC-type branched-chain amino acid transport system, permease protein II 1731 47.53 0 2116659..2118116 - 485 110668707 livH HQ2808A - ABC-type branched-chain amino acid transport system, permease protein I 1732 48.30 0 2118220..2119575 + 451 110668708 livJ HQ2809A - ABC-type branched-chain amino acid transport systems, substrate-binding protein 1733 48.34 0 2119942..2121240 + 432 110668709 - HQ2810A - hypothetical protein 1734 41.96 -1 2121378..2121632 - 84 110668710 - HQ2811A - hypothetical protein 1735 44.98 0 2121737..2122045 - 102 110668711 - HQ2812A - hypothetical protein 1736 45.48 0 2122263..2122682 + 139 110668712 - HQ2813A - hypothetical protein 1737 43.10 -1 2122710..2123723 - 337 110668713 - HQ2814A - signal-transducing histidine kinase 1738 40.21 -2 2124237..2124527 - 96 110668714 - HQ2815A - hypothetical protein 1739 48.52 0 2125317..2125553 + 78 110668715 - HQ2816A - hypothetical protein 1740 55.46 +1 2125671..2126036 - 121 110668716 - HQ2817A - hypothetical protein 1741 43.04 -1 2126475..2126711 + 78 110668717 - HQ2818A - hypothetical protein 1742 49.39 0 2126989..2128458 - 489 110668718 secY HQ2819A - preprotein translocase subunit SecY 1743 48.48 0 2128474..2128968 - 164 110668719 rpl15p HQ2820A - 50S ribosomal protein L15P 1744 50.54 0 2128965..2129429 - 154 110668720 rpl30p HQ2821A - 50S ribosomal protein L30P 1745 50.91 0 2129429..2130088 - 219 110668721 rps5p HQ2822A - 30S ribosomal protein S5P 1746 52.27 0 2130085..2130702 - 205 110668722 rpl18p HQ2823A - 50S ribosomal protein L18P 1747 51.52 0 2130702..2131163 - 153 110668723 rpl19e HQ2824A - 50S ribosomal protein L19e 1748 51.99 0 2131160..2132113 - 317 110668724 rpl32R HQ2825A - 50S ribosomal protein L32e 1749 49.73 0 2132115..2132663 - 182 110668725 rpl6p HQ2826A - 50S ribosomal protein L6P 1750 47.84 0 2132668..2133060 - 130 110668726 rps8p HQ2827A - 30S ribosomal protein S8P 1751 48.59 0 2133063..2133239 - 58 110668727 rps14P HQ2828A - 30S ribosomal protein S14P 1752 50.00 0 2133246..2133803 - 185 110668728 rpl5p HQ2829A - 50S ribosomal protein L5P 1753 47.49 0 2133800..2134597 - 265 110668729 rps4R HQ2830A - 30S ribosomal protein S4e 1754 49.17 0 2134594..2134953 - 119 110668730 rpl24p HQ2831A - 50S ribosomal protein L24P 1755 51.88 0 2134963..2135361 - 132 110668731 rpl14p HQ2832A - 50S ribosomal protein L14P 1756 56.16 +1 2135361..2135693 - 110 110668732 rps17p HQ2833A - 30S ribosomal protein S17P 1757 49.34 0 2135684..2136370 - 228 110668733 rnpA HQ2834A - ribonuclease P protein component 1 (RNase P component 1) 1758 53.07 +1 2136395..2136622 - 75 110668734 rpl29 HQ2835A - 50S ribosomal protein L29 1759 49.69 0 2136623..2137594 - 323 110668735 rps3p HQ2836A - 30S ribosomal protein S3P 1760 47.17 0 2137594..2138070 - 158 110668736 rpl22p HQ2837A - 50S ribosomal protein L22P 1761 48.94 0 2138097..2138519 - 140 110668737 rps19p HQ2838A - 30S ribosomal protein S19P 1762 51.64 0 2138664..2139395 - 243 110668738 rpl2p HQ2839A - 50S ribosomal protein L2P 1763 38.82 -2 2139399..2139653 - 84 110668739 rplW HQ2840A - 50S ribosomal protein L23 1764 51.67 0 2139650..2140396 - 248 110668740 rpl4lp HQ2841A - 50S ribosomal protein L4P 1765 53.10 +1 2140403..2141419 - 338 110668741 rpl3p HQ2842A - 50S ribosomal protein L3P 1766 55.37 +1 2141424..2142335 - 303 110668742 - HQ2843A - rpl operon protein 1767 48.06 0 2143012..2143758 + 248 110668743 - HQ2844A - hypothetical protein 1768 50.00 0 2143835..2144392 - 185 110668744 - HQ2845A - hypothetical protein 1769 48.48 0 2144396..2144923 - 175 110668745 - HQ2846A - hypothetical protein 1770 50.37 0 2145407..2146609 - 400 110668746 idiB HQ2847A - isopentenyl-diphosphate delta-isomerase 1771 57.30 +2 2147598..2149754 + 718 110668747 capA HQ2849A - poly-gamma-glutamate biosynthesis/capsule biosynthesis protein 1772 48.20 0 2150200..2150811 - 203 110668748 - HQ2850A - translation initiation factor IF-2 subunit beta 1773 45.45 0 2151392..2151622 - 76 110668749 - HQ2851A - hypothetical protein 1774 48.98 0 2151812..2152936 - 374 110668750 dhs HQ2852A - putative deoxyhypusine synthase 1775 46.82 0 2153558..2154328 - 256 110668751 nif3 HQ2853A - hypothetical protein 1776 48.00 0 2154525..2156276 - 583 110668752 - HQ2854A - hypothetical protein 1777 46.83 0 2156386..2156637 - 83 110668753 - HQ2855A - hypothetical protein 1778 44.68 -1 2156640..2157767 - 375 110668754 - HQ2856A - hypothetical protein 1779 47.93 0 2158212..2159081 - 289 110668755 sucD HQ2857A - succinate--CoA ligase, alpha subunit (ADP-forming) 1780 47.38 0 2159078..2160223 - 381 110668756 sucC HQ2858A - succinate--CoA ligase beta subunit (ADP-forming) 1781 47.87 0 2160650..2166379 + 1909 110668757 nrdA HQ2859A - ribonucleoside-diphosphate reductase alpha subunit (intein-containing) 1782 49.47 0 2167497..2168537 + 346 110668758 crtB HQ2860A - geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) 1783 47.47 0 2168848..2169696 - 282 110668759 - HQ2861A - carotenoid biosynthesis protein 48.79 MEAN 3.84 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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