version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 924 35.92 0 1012730..1013695 + 321 113461061 kpsF HS_0918 - polysialic acid capsule expression protein, KpsF/GutQ family protein 925 37.17 0 1013679..1014251 + 190 113461062 kdsC HS_0919 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 926 29.84 -2 1014584..1015069 + 161 113461063 ftnA HS_0920 - ferritin like protein 1 927 31.53 -1 1015086..1015583 + 165 113461064 ftnB HS_0921 - ferritin like protein 2 928 35.05 0 1015812..1016567 - 251 113461065 - HS_0922 - DeoR family transcriptional regulator 929 35.12 0 1016671..1017900 - 409 113461066 - HS_0923 - hypothetical protein 930 37.44 0 1017897..1018895 - 332 113461067 kdgT HS_0924 - 2-keto-3-deoxygluconate permease 931 38.32 0 1018906..1019907 - 333 113461068 pdxA HS_0925 - 4-hydroxythreonine-4-phosphate dehydrogenase 932 41.03 +1 1020328..1021692 + 454 113461069 dat HS_0926 - diaminobutyrate--2-oxoglutarate aminotransferase 933 43.29 +1 1021782..1023317 + 511 113461070 ddc HS_0927 - L-2,4-diaminobutyrate decarboxylase 934 33.68 -1 1023434..1025458 - 674 113461071 recD HS_0928 - DNA helicase/exodeoxyribonuclease V, alpha subunit 935 33.36 -1 1025458..1029108 - 1216 113461072 recB HS_0929 - DNA helicase/exodeoxyribonuclease V, beta subunit 936 38.43 0 1029219..1030082 - 287 113461073 htpX HS_0930 - heat shock protein HtpX 937 35.50 0 1030168..1031229 - 353 113461074 dinP HS_0931 - DNA polymerase IV 938 40.46 0 1031554..1032507 + 317 113461075 accA HS_0932 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 939 35.89 0 1032576..1033436 + 286 113461076 pdxY HS_0933 - pyridoxamine kinase 940 36.53 0 1033511..1034794 + 427 113461077 mesJ HS_0934 - cell-cycle protein 941 30.32 -1 1034871..1035302 - 143 113461078 - HS_0935 - hypothetical protein 942 34.78 0 1035431..1036189 + 252 113461079 - HS_0936 - hypothetical protein 943 32.40 -1 1036481..1037227 + 248 113461080 - HS_0937 - hypothetical protein 944 37.70 0 1037324..1038973 - 549 113461081 pgi HS_0938 - glucose-6-phosphate isomerase 945 36.48 0 1039001..1040080 - 359 113461082 alr HS_0939 - alanine racemase 946 37.14 0 1040097..1041515 - 472 113461083 dnaB HS_0940 - replicative DNA helicase 947 37.78 0 1041668..1042747 - 359 113461084 aroG HS_0941 - phospho-2-dehydro-3-deoxyheptonate aldolase 948 35.39 0 1042854..1043969 - 371 113461085 lolE HS_0942 - outer membrane-specific lipoprotein transporter subunit LolE 949 38.01 0 1044101..1044784 - 227 113461086 lolD HS_0943 - lipoprotein releasing system, ATP-binding protein 950 36.69 0 1044805..1045995 - 396 113461087 lolC HS_0944 - lipoprotein releasing system, transmembrane protein 951 37.79 0 1046165..1047106 - 313 113461088 ldhA HS_0945 - glycerate dehydrogenase 952 36.96 0 1047218..1048072 - 284 113461089 kdsA HS_0946 - 2-dehydro-3-deoxyphosphooctonate aldolase 953 34.72 0 1048086..1048880 - 264 113461090 - HS_0947 - hypothetical protein 954 37.20 0 1048864..1049769 - 301 113461091 hemK HS_0948 - peptide release factor glutamine N(5)-methylase 955 30.89 -1 1049784..1050275 - 163 113461092 - HS_0949 - hypothetical protein 956 40.44 0 1050327..1051409 - 360 113461093 prfA HS_0950 - peptide chain release factor 1 957 24.56 -2 1051572..1051799 - 75 113461094 - HS_0951 - hypothetical protein 958 41.56 +1 1051914..1052375 - 153 113461095 pcp HS_0952 - outer membrane lipoprotein pcp precursor 959 31.79 -1 1052399..1052722 - 107 113461096 - HS_0953 - hypothetical protein 960 33.84 0 1052728..1053315 - 195 113461097 - HS_0954 - hypothetical protein 961 37.89 0 1053399..1055132 + 577 113461098 argS HS_0955 - arginyl-tRNA synthetase 962 40.78 +1 1055206..1056078 - 290 113461099 sucD HS_0956 - succinyl-CoA synthetase (ADP-forming) alpha subunit 963 38.03 0 1056078..1057247 - 389 113461100 sucC HS_0957 - succinyl-CoA synthetase (ADP-forming) beta subunit 964 40.44 0 1057301..1058524 - 407 113461101 sucB HS_0958 - 2-oxoglutarate dehydrogenase E2 component 965 40.02 0 1058613..1061408 - 931 113461102 kgd HS_0959 - alpha-ketoglutarate decarboxylase 966 37.46 0 1061754..1063037 + 427 113461103 gltA HS_0960 - citrate synthase 967 37.67 0 1063175..1064305 + 376 113461104 nrdB HS_0961 - ribonucleotide-diphosphate reductase subunit beta 968 34.50 0 1064371..1064628 + 85 113461105 - HS_0962 - ferredoxin, 2Fe-2S type 969 38.22 0 1064682..1065869 - 395 113461106 nhaA HS_0963 - Na+/H+ antiporter 970 38.98 0 1066056..1067402 - 448 113461107 dgt HS_0964 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 971 27.56 -2 1067418..1067642 - 74 113461108 - HS_0965 - hypothetical protein 972 33.69 -1 1067518..1068075 + 185 113461109 - HS_0966 - nuclease 973 40.58 0 1068065..1069264 + 399 113461110 csd HS_0967 - cysteine desulfurase, aminotransferase, class V 974 36.75 0 1069261..1069641 + 126 113461111 - HS_0968 - hypothetical protein 975 40.55 0 1070099..1070389 + 96 113461112 relB HS_0969 - RelB protein 976 40.32 0 1070328..1070642 + 104 113461113 - HS_0970 - hypothetical protein 977 38.38 0 1070718..1071668 - 316 113461114 ompH HS_0971 - ompH family outer membrane protein 978 38.36 0 1071929..1072246 - 105 113461115 yciH HS_0972 - translation initiation factor 1 (eIF-1/SUI1) 979 36.51 0 1072426..1073622 - 398 113461116 - HS_0973 - hypothetical protein 980 28.77 -2 1073632..1073916 - 94 113461117 - HS_0974 - hypothetical protein 981 32.63 -1 1074036..1074320 - 94 113461118 ihfB HS_0975 - integration host factor, beta-subunit 982 38.08 0 1074384..1076027 - 547 113461119 rpsA HS_0976 - 30S ribosomal protein S1 983 40.48 0 1076100..1076813 - 237 113461120 cmkA HS_0977 - cytidylate kinase 984 41.03 +1 1076866..1077891 - 341 113461121 lpxD HS_0978 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 985 36.07 0 1077891..1078475 - 194 113461122 skp HS_0979 - outer membrane protein 986 38.40 0 1078572..1080980 - 802 113461123 - HS_0980 - surface antigen 987 36.79 0 1081049..1082380 - 443 113461124 - HS_0981 - peptidase RseP 988 38.66 0 1082389..1083252 - 287 113461125 cdsA HS_0982 - phosphatidate cytidylyltransferase 989 34.02 0 1083265..1083990 - 241 113461126 uppS HS_0983 - undecaprenyl pyrophosphate synthetase 990 34.32 0 1084172..1084678 - 168 113461127 - HS_0984 - hypothetical protein 991 39.78 0 1084680..1085888 - 402 113461128 dxr HS_0985 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 992 38.53 0 1085959..1086516 - 185 113461129 frr HS_0986 - ribosome recycling factor 993 42.12 +1 1086570..1087286 - 238 113461130 pyrH HS_0987 - uridylate kinase 994 33.98 0 1087385..1087693 - 102 113461131 - HS_0988 - hypothetical protein 995 35.58 0 1087797..1088108 + 103 113461132 - HS_0989 - hypothetical protein 996 38.67 0 1088177..1090873 + 898 113461133 secA HS_0990 - preprotein translocase subunit SecA 997 38.35 0 1090920..1091318 + 132 113461134 mutT HS_0991 - 7,8-dihydro-8-oxoguanine-triphosphatase 998 36.76 0 1091386..1095297 - 1303 113461135 hrpA HS_0992 - ATP-dependent RNA helicase HrpA 999 38.82 0 1095344..1095799 - 151 113461136 - HS_0993 - permease 1000 39.28 0 1096112..1098751 + 879 113461137 ppc HS_0994 - phosphoenolpyruvate carboxylase 1001 35.19 0 1098855..1099178 + 107 113461138 - HS_0995 - dsDNA-mimic protein 1002 41.35 +1 1099335..1100282 - 315 113461139 prs HS_0996 - ribose-phosphate pyrophosphokinase 1003 35.88 0 1100290..1101231 - 313 113461140 ispE HS_0997 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1004 33.49 -1 1101231..1101860 - 209 113461141 lolB HS_0998 - outer membrane lipoprotein LolB 1005 36.67 0 1102038..1102307 + 89 113461142 - HS_0999 - hypothetical protein 1006 36.90 0 1102586..1103062 + 158 113461143 greA HS_1000 - transcription elongation factor GreA 1007 37.04 0 1103118..1103414 - 98 113461144 - HS_1001 - hypothetical protein 1008 36.75 0 1103541..1103891 - 116 113461145 arsC HS_1002 - arsenate reductase 1009 36.47 0 1103977..1105029 + 350 113461146 perM HS_1003 - permease 1010 36.29 0 1105109..1106497 + 462 113461147 - HS_1004 - periplasmic binding transport protein 1011 35.35 0 1106463..1106660 - 65 113461148 - HS_1005 - hypothetical protein 1012 36.75 0 1107112..1108428 + 438 113461149 cadB HS_1006 - lysine/cadaverine antiporter 1013 34.23 0 1108445..1110571 + 708 113461150 cadA HS_1007 - L-lysine decarboxylase 1014 34.61 0 1110793..1112283 + 496 113461151 lysS HS_1008 - lysyl-tRNA synthetase 1015 32.88 -1 1112316..1113203 + 295 113461152 iciA HS_1009 - chromosome replication initiation inhibitor protein 1016 40.96 +1 1113463..1114458 - 331 113461153 bioB HS_1010 - biotin synthase 1017 35.97 0 1114490..1115134 - 214 113461154 thiQ HS_1011 - thiamine ABC transporter, ATP-binding protein 1018 34.63 0 1115127..1116671 - 514 113461155 thiP HS_1012 - thiamine transporter membrane protein 1019 37.17 0 1116733..1117749 - 338 113461156 tbpA HS_1013 - thiamine ABC transporter, periplasmic-binding protein 1020 39.00 0 1118086..1119444 + 452 113461157 - HS_1014 - permease 1021 33.50 -1 1119492..1120085 + 197 113461158 - HS_1015 - hypothetical protein 1022 25.29 -2 1120120..1120293 - 57 113461941 - HS_1015a - hypothetical protein 1023 33.33 -1 1120294..1120884 - 196 113461159 - HS_1016 - RNA polymerase sigma factor 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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