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Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 847 36.25 0 919074..919895 + 273 113460985 - HS_0842 - outer membrane protein 848 31.64 -1 919946..920950 - 334 113460986 - HS_0843 - fructosamine kinase family protein 849 39.09 0 921208..923136 + 642 113460987 thrS HS_0844 - threonyl-tRNA synthetase 850 32.16 -1 923192..924040 - 282 113460988 - HS_0845 - hypothetical protein 851 37.91 0 924377..925687 + 436 113460989 - HS_0846 - xanthine/uracil family permease 852 37.80 0 925768..926304 + 178 113460990 - HS_0847 - hypothetical protein 853 33.98 0 926305..927234 + 309 113460991 - HS_0848 - ABC-type multidrug transport system, ATP-binding protein 854 33.59 -1 927234..927998 + 254 113460992 - HS_0849 - ABC-type multidrug transport system, permease component 855 34.85 0 928108..929490 - 460 113460993 - HS_0850 - hypothetical protein 856 34.17 0 929503..930342 - 279 113460994 queF HS_0851 - 7-cyano-7-deazaguanine reductase 857 33.21 -1 930358..931146 - 262 113460995 - HS_0852 - hypothetical protein 858 37.14 0 931232..931546 + 104 113460996 - HS_0853 - hypothetical protein 859 35.18 0 931549..932253 + 234 113460997 truC HS_0854 - tRNA pseudouridine synthase C 860 33.33 -1 932247..932447 + 66 113460998 - HS_0855 - hypothetical protein 861 37.14 0 932597..932806 + 69 113460999 cspD HS_0856 - cold-shock DNA-binding protein family protein 862 31.32 -1 932878..933324 - 148 113461000 - HS_0857 - hypothetical protein 863 34.82 0 933476..935287 + 603 113461001 - HS_0858 - ATP-dependent Lon protease 864 36.57 0 935382..936371 + 329 113461002 pheS HS_0859 - phenylalanyl-tRNA synthetase subunit alpha 865 32.71 -1 936386..936865 + 159 113461003 - HS_0860 - hypothetical protein 866 38.82 0 936880..939267 + 795 113461004 pheT HS_0861 - phenylalanyl-tRNA synthetase subunit beta 867 36.73 0 939270..939563 + 97 113461005 himA HS_0862 - integration host factor, alpha-subunit 868 33.97 0 939707..940651 - 314 113461006 - HS_0863 - hypothetical protein 869 37.19 0 940859..942181 + 440 113461007 kicB HS_0864 - condesin subunit F 870 37.37 0 942248..942991 + 247 113461008 kicA HS_0865 - condesin subunit E 871 38.08 0 943114..947520 + 1468 113461009 mukB HS_0866 - cell division protein MukB 872 37.08 0 947677..948531 + 284 113461010 - HS_0867 - permease 873 32.65 -1 948627..948920 + 97 113461011 - HS_0868 - hypothetical protein 874 27.99 -2 949454..949846 + 130 113461012 - HS_0869 - hypothetical protein 875 30.49 -1 949941..950996 + 351 113461013 - HS_0870 - hypothetical protein 876 35.27 0 951085..951342 + 85 113461014 - HS_0871 - hypothetical protein 877 34.98 0 951474..952934 + 486 113461015 sbcB HS_0872 - exonuclease I 878 37.15 0 953614..953901 - 95 113461016 rplY HS_0873 - 50S ribosomal protein L25 879 33.17 -1 954122..954727 + 201 113461017 - HS_0874 - hypothetical protein 880 39.83 0 954900..955253 - 117 113461018 rplT HS_0875 - 50S ribosomal protein L20 881 37.88 0 955324..955521 - 65 113461019 rpmI HS_0876 - 50S ribosomal protein L35 882 39.38 0 955620..956099 - 159 113461020 infC HS_0877 - translation initiation factor IF-3 883 33.85 0 956523..957296 + 257 113461021 fnr HS_0878 - fumarate/nitrate reduction transcriptional regulator 884 34.63 0 957447..958370 + 307 113461022 uspE HS_0879 - universal stress protein UspE 885 32.88 -1 958415..959746 - 443 113461023 folC HS_0880 - folylpolyglutamate synthase 886 37.33 0 959736..960635 - 299 113461024 accD HS_0881 - acetyl-CoA carboxylase subunit beta 887 35.24 0 960720..961664 - 314 113461025 usg HS_0882 - aspartate-semialdehyde dehydrogenase 888 37.78 0 961769..962578 - 269 113461026 trpH HS_0883 - TrpH protein 889 35.98 0 962676..965285 - 869 113461027 pepN HS_0884 - aminopeptidase N 890 35.73 0 965394..967853 - 819 113461028 glgP HS_0885 - glycogen phosphorylase 891 36.94 0 967975..969414 - 479 113461029 glgA HS_0886 - glycogen synthase 892 36.00 0 969484..970794 - 436 113461030 glgC HS_0887 - glucose-1-phosphate adenylyltransferase 893 36.56 0 970853..972835 - 660 113461031 glgX HS_0888 - glycogen operon protein 894 37.62 0 972861..975284 - 807 113461032 glgB HS_0889 - 1,4-alpha-glucan branching enzyme 895 35.52 0 975296..977395 - 699 113461033 malQ HS_0890 - 4-alpha-glucanotransferase 896 36.11 0 977505..977972 - 155 113461034 - HS_0891 - hypothetical protein 897 37.57 0 978062..980845 - 927 113461035 pqqL HS_0892 - zinc protease 898 37.20 0 980845..981645 - 266 113461036 - HS_0893 - hypothetical protein 899 39.40 0 981768..983234 - 488 113461037 - HS_0894 - hypothetical protein 900 38.49 0 983429..985075 - 548 113461038 glnS HS_0895 - glutaminyl-tRNA synthetase 901 40.42 0 985301..986245 + 314 113461039 - HS_0896 - hypothetical protein 902 38.38 0 986232..989321 - 1029 113461040 ttrA HS_0897 - tetrathionate reductase, subunit A 903 34.21 0 989314..990342 - 342 113461041 ttrC HS_0898 - tetrathionate reductase, subunit C 904 39.02 0 990339..991076 - 245 113461042 ttrB HS_0899 - tetrathionate reductase, subunit B 905 33.04 -1 991289..992986 + 565 113461043 ttrS HS_0900 - sensor kinase 906 31.47 -1 992988..993578 + 196 113461044 ttrR HS_0901 - two component response regulator 907 35.74 0 993618..995072 - 484 113461045 thiI HS_0902 - thiamine biosynthesis protein ThiI 908 39.46 0 995253..995513 + 86 113461046 xseB HS_0903 - exodeoxyribonuclease VII small subunit 909 38.05 0 995529..996419 + 296 113461047 ispA HS_0904 - farnesyl-diphosphate synthase 910 38.62 0 996452..998305 + 617 113461048 dxs HS_0905 - 1-deoxy-D-xylulose-5-phosphate synthase 911 34.54 0 998563..999471 + 302 113461049 - HS_0906 - permease 912 38.34 0 999657..1000175 + 172 113461050 fabA HS_0907 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 913 36.44 0 1000290..1002155 - 621 113461051 sppA HS_0908 - protease IV family protein 914 37.12 0 1002283..1002837 + 184 113461052 - HS_0909 - nitroreductase family protein 915 35.01 0 1002903..1003559 - 218 113461053 folE HS_0910 - GTP cyclohydrolase I 916 38.48 0 1003736..1004920 + 394 113461054 moeA HS_0911 - molybdopterin molybdochelatase 917 37.04 0 1004928..1005656 + 242 113461055 moeB HS_0912 - molybdopterin biosynthesis protein MoeB 918 47.39 +2 1005729..1006361 - 210 113461056 purN HS_0913 - phosphoribosylglycinamide formyltransferase 919 37.78 0 1006574..1009180 - 868 113461057 topA HS_0914 - DNA topoisomerase I 920 38.65 0 1009461..1010081 - 206 113461058 ubiX HS_0915 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 921 38.81 0 1010038..1011552 - 504 113461059 purF HS_0916 - amidophosphoribosyltransferase 922 32.53 -1 1011565..1012065 - 166 113461060 cvpA HS_0917 - colicin V production protein 923 45.83 +2 1012275..1012490 + 71 113461940 - HS_0917a - hypothetical protein 924 35.92 0 1012730..1013695 + 321 113461061 kpsF HS_0918 - polysialic acid capsule expression protein, KpsF/GutQ family protein 925 37.17 0 1013679..1014251 + 190 113461062 kdsC HS_0919 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 926 29.84 -2 1014584..1015069 + 161 113461063 ftnA HS_0920 - ferritin like protein 1 927 31.53 -1 1015086..1015583 + 165 113461064 ftnB HS_0921 - ferritin like protein 2 928 35.05 0 1015812..1016567 - 251 113461065 - HS_0922 - DeoR family transcriptional regulator 929 35.12 0 1016671..1017900 - 409 113461066 - HS_0923 - hypothetical protein 930 37.44 0 1017897..1018895 - 332 113461067 kdgT HS_0924 - 2-keto-3-deoxygluconate permease 931 38.32 0 1018906..1019907 - 333 113461068 pdxA HS_0925 - 4-hydroxythreonine-4-phosphate dehydrogenase 932 41.03 +1 1020328..1021692 + 454 113461069 dat HS_0926 - diaminobutyrate--2-oxoglutarate aminotransferase 933 43.29 +1 1021782..1023317 + 511 113461070 ddc HS_0927 - L-2,4-diaminobutyrate decarboxylase 934 33.68 -1 1023434..1025458 - 674 113461071 recD HS_0928 - DNA helicase/exodeoxyribonuclease V, alpha subunit 935 33.36 -1 1025458..1029108 - 1216 113461072 recB HS_0929 - DNA helicase/exodeoxyribonuclease V, beta subunit 936 38.43 0 1029219..1030082 - 287 113461073 htpX HS_0930 - heat shock protein HtpX 937 35.50 0 1030168..1031229 - 353 113461074 dinP HS_0931 - DNA polymerase IV 938 40.46 0 1031554..1032507 + 317 113461075 accA HS_0932 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 939 35.89 0 1032576..1033436 + 286 113461076 pdxY HS_0933 - pyridoxamine kinase 940 36.53 0 1033511..1034794 + 427 113461077 mesJ HS_0934 - cell-cycle protein 941 30.32 -1 1034871..1035302 - 143 113461078 - HS_0935 - hypothetical protein 942 34.78 0 1035431..1036189 + 252 113461079 - HS_0936 - hypothetical protein 943 32.40 -1 1036481..1037227 + 248 113461080 - HS_0937 - hypothetical protein 944 37.70 0 1037324..1038973 - 549 113461081 pgi HS_0938 - glucose-6-phosphate isomerase 945 36.48 0 1039001..1040080 - 359 113461082 alr HS_0939 - alanine racemase 946 37.14 0 1040097..1041515 - 472 113461083 dnaB HS_0940 - replicative DNA helicase 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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