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Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 619 37.12 0 654297..655406 + 369 113460757 hisC HS_0612 - histidinol-phosphate aminotransferase 620 39.41 0 655469..656767 + 432 113460758 aroA HS_0613 - 3-phosphoshikimate 1-carboxyvinyltransferase 621 38.02 0 657001..658215 + 404 113460759 - HS_0614 - membrane fusion protein 622 37.60 0 658237..661353 + 1038 113460760 acrB HS_0615 - cation/multidrug efflux protein 623 35.57 0 661379..662137 - 252 113460761 - HS_0616 - acyl-CoA thioester hydrolase YfbB 624 39.78 0 662150..663856 - 568 113460762 menD HS_0617 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 625 34.35 0 663862..665145 - 427 113460763 menF HS_0618 - isochorismate synthase 626 36.38 0 665297..666511 + 404 113460764 - HS_0619 - aminotransferase AlaT 627 30.49 -1 667230..667616 - 128 113460765 - HS_0620 - transcriptional regulator 628 34.96 0 667778..668578 + 266 113460766 - HS_0621 - hypothetical protein 629 30.54 -1 668613..669866 + 417 113460767 - HS_0622 - hypothetical protein 630 36.11 0 669927..670646 - 239 113460768 fadR HS_0623 - fatty acid metabolism regulator 631 31.88 -1 670750..671370 + 206 113460769 dshB HS_0624 - disulfide bond formation protein B 632 38.61 0 672127..673131 + 334 113460770 terC HS_0625 - membrane protein 633 36.64 0 673133..673495 + 120 113460771 - HS_0626 - hypothetical protein 634 28.11 -2 673507..674157 + 216 113460772 - HS_0627 - hypothetical protein 635 41.31 +1 674167..674805 + 212 113460773 - HS_0628 - hypothetical protein 636 41.30 +1 674853..675530 + 225 113460774 - HS_0629 - hypothetical protein 637 42.73 +1 675539..676570 + 343 113460775 - HS_0630 - hypothetical protein 638 39.39 0 676573..678123 + 516 113460776 - HS_0631 - hypothetical protein 639 43.42 +1 678116..679612 + 498 113460777 - HS_0632 - serine/threonine kinase-like protein 640 43.18 +1 679642..680220 + 192 113460778 terD HS_0633 - stress response protein 641 38.55 0 680223..680969 + 248 113460779 terE HS_0634 - stress response protein 642 38.14 0 680979..681560 + 193 113460780 terZ HS_0635 - stress response protein 643 30.23 -2 682438..683502 - 354 113460781 lob2d HS_0636 - glycosyltransferase family 8 lipopolysaccharide biosynthesis protein 644 26.00 -2 683679..684155 - 158 113460782 lob2A HS_0637 - lipooligosaccharide biosynthesis protein 645 31.21 -1 684277..685170 + 297 113460783 lob1 HS_0638 - Lob1 protein 646 35.52 0 685341..686390 - 349 113460784 fbpC HS_0639 - ferric transporter ATP-binding subunit 647 35.57 0 686457..688514 - 685 113460785 afuB HS_0640 - Fe3+ ABC transporter, permease 648 36.53 0 688536..689567 - 343 113460786 afuA HS_0641 - Fe3+ ABC transporter, iron-binding protein 649 37.46 0 689621..690274 - 217 113460787 - HS_0642 - insertion element IS1016 transposase 650 36.22 0 690316..691356 - 346 113460788 afuA HS_0643 - Fe3+ ABC transporter, iron-binding protein 651 35.51 0 691560..692201 + 213 113460789 udk HS_0644 - uridine kinase 652 39.49 0 692211..692795 + 194 113460790 dcd HS_0645 - deoxycytidine triphosphate deaminase 653 33.08 -1 692810..694003 + 397 113460791 - HS_0646 - hypothetical protein 654 34.43 0 694283..695284 + 333 113460792 - HS_0647 - sodium-dependent transporter 655 37.98 0 695374..696018 + 214 113460793 adk HS_0648 - adenylate kinase 656 37.41 0 696104..696691 - 195 113460794 grpE HS_0649 - GrpE protein 657 35.51 0 696834..697751 + 305 113460795 ppnK HS_0650 - inorganic polyphosphate/ATP-NAD kinase 658 35.89 0 697829..699508 + 559 113460796 recN HS_0651 - DNA repair protein 659 34.55 0 699699..701009 - 436 113460797 nhaP HS_0652 - Na+/H+ antiporter 660 35.61 0 701338..701688 - 116 113460798 - HS_0653 - translation inhibitor of mRNA 661 31.54 -1 701799..702521 + 240 113460799 - HS_0654 - hypothetical protein 662 37.67 0 702536..703435 + 299 113460800 rimK HS_0655 - SSU ribosomal protein S6P modification protein 663 37.05 0 703554..704549 + 331 113460801 lpxK HS_0656 - tetraacyldisaccharide 4'-kinase 664 35.86 0 704546..704743 + 65 113460802 - HS_0657 - hypothetical protein 665 38.65 0 704758..705528 + 256 113460803 kdsB HS_0658 - 3-deoxy-manno-octulosonate cytidylyltransferase 666 37.21 0 705521..707350 + 609 113460804 uvrC HS_0659 - excinuclease ABC subunit C 667 35.14 0 707416..707802 - 128 113460805 - HS_0660 - hypothetical protein 668 37.17 0 707927..709906 - 659 113460806 rnb HS_0661 - exoribonuclease II 669 42.46 +1 709971..710759 - 262 113460807 fabI HS_0662 - enoyl-[acyl-carrier-protein] reductase [NADH] 670 38.89 0 710850..711605 - 251 113460808 - HS_0663 - hypothetical protein 671 37.47 0 711629..713659 - 676 113460809 mnmC HS_0664 - 5-methylaminomethyl-2-thiouridine methyltransferase 672 42.34 +1 713814..715034 + 406 113460810 fabB HS_0665 - 3-oxoacyl-(acyl carrier protein) synthase I 673 36.73 0 715124..715564 - 146 113460811 - HS_0666 - transposase 674 37.53 0 715676..716080 + 134 113460812 - HS_0667 - transposase 675 40.09 0 716028..716723 + 231 113460813 - HS_0668 - transposase 676 33.54 -1 716869..717360 - 163 113460814 - HS_0669 - hypothetical protein 677 31.54 -1 717522..717911 + 129 113460815 - HS_0670 - transcriptional regulator 678 35.38 0 718191..719315 - 374 113460816 tyrA HS_0671 - bifunctional chorismate mutase/prephenate dehydrogenase 679 41.57 +1 719516..720013 + 165 113460817 purE HS_0672 - phosphoribosylaminoimidazole carboxylase (AIR carboxylase) 680 33.70 -1 720224..721033 - 269 113460818 srlR HS_0673 - DNA-bindng transcriptional repressor SrlR 681 34.26 0 721076..721723 - 215 113460819 - HS_0674 - phosphatase 682 34.96 0 721798..722166 - 122 113460820 gutM HS_0675 - DNA-binding transcriptional activator GutM 683 38.66 0 722221..723009 - 262 113460821 srlD HS_0676 - sorbitol-6-phosphate dehydrogenase 684 38.52 0 723056..723421 - 121 113460822 srlB HS_0677 - glucitol/sorbitol-specific PTS system component IIA 685 41.27 +1 723482..724477 - 331 113460823 srlE HS_0678 - PTS system, glucitol/sorbitol-specific IIBC component 686 38.20 0 724514..725068 - 184 113460824 srlA HS_0679 - PTS system, glucitol/sorbitol-specific IIC2 component 687 37.24 0 725395..726570 - 391 113460825 visC HS_0680 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 688 40.17 0 726597..727796 - 399 113460826 ubiH HS_0681 - 2-octaprenyl-6-methoxyphenol hydroxylase / 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 689 36.52 0 727824..729143 - 439 113460827 pepP HS_0682 - aminopeptidase P 690 34.59 0 729310..729867 - 185 113460828 - HS_0683 - hypothetical protein 691 34.33 0 730010..730309 + 99 113460829 - HS_0684 - cell division protein ZapA 692 35.10 0 730605..731171 + 188 113460830 - HS_0685 - 5-formyltetrahydrofolate cyclo-ligase 693 32.47 -1 731160..731858 - 232 113460831 aphA HS_0686 - aphA-like regulator 694 35.12 0 731926..732879 + 317 113460832 serB HS_0687 - phosphoserine phosphatase 695 33.54 -1 732896..733387 + 163 113460833 - HS_0688 - nucleotide-binding protein 696 39.04 0 733485..734237 - 250 113460834 tonB HS_0689 - TonB protein 697 33.58 -1 734237..734635 - 132 113460835 exbD HS_0690 - biopolymer transport protein 698 33.99 0 734628..735083 - 151 113460836 exbB HS_0691 - biopolymer transport protein 699 38.79 0 735477..736850 - 457 113460837 argH HS_0692 - argininosuccinate lyase 700 34.60 0 737288..738154 + 288 113460838 rbn HS_0693 - ribonuclease BN 701 39.54 0 738151..738585 + 144 113460839 dtd HS_0694 - D-tyrosyl-tRNA deacylase 702 36.86 0 738633..739511 - 292 113460840 nanA HS_0695 - N-acetylneuraminate lyase 703 36.21 0 739544..740413 - 289 113460841 - HS_0696 - RpiR family transcriptional regulator 704 34.61 0 740448..740918 - 156 113460842 - HS_0697 - hypothetical protein 705 43.34 +1 740934..741812 - 292 113460843 nanK HS_0698 - N-acetylmannosamine kinase 706 44.01 +1 741829..742521 - 230 113460844 nanE HS_0699 - N-acetylmannosamine-6-phosphate 2-epimerase 707 35.03 0 742567..743157 - 196 113460845 neuA HS_0700 - N-acylneuraminate cytidylyltransferase 708 36.75 0 743326..744378 + 350 113460846 dctP HS_0701 - TRAP dicarboxylate transporter, periplasmic component 709 38.64 0 744433..746298 + 621 113460847 dctQ HS_0702 - TRAP dicarboxylate transporter, permease component 710 41.36 +1 746649..748790 + 713 113460848 pnp HS_0703 - polynucleotide phosphorylase/polyadenylase 711 40.42 0 749193..750998 + 601 113460849 deaD HS_0704 - ATP-dependent RNA helicase 712 35.16 0 751060..751278 - 72 113460850 infA HS_0705 - translation initiation factor IF-1 713 36.25 0 751489..752037 + 182 113460851 neuA HS_0706 - CMP-N-acetylneuraminic acid synthetase 714 37.25 0 752266..753285 + 339 113460852 rmlB HS_0707 - dTDP-glucose 4,6-dehydratase 715 36.85 0 753459..755138 + 559 113460853 lctP HS_0708 - L-lactate permease 716 35.93 0 755218..755949 + 243 113460854 - HS_0709 - hypothetical protein 717 38.08 0 755951..757363 + 470 113460855 - HS_0710 - hypothetical protein 718 36.89 0 757444..758061 + 205 113460856 - HS_0711 - hypothetical protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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