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Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 349 36.66 0 349291..350403 + 370 113460491 - HS_0345 - PhoH-like ATP-binding protein 350 37.20 0 350425..350889 + 154 113460492 - HS_0346 - metal-dependent hydrolase 351 36.46 0 350879..352831 + 650 113460493 - HS_0347 - acetyltransferase 352 38.51 0 352864..353037 + 57 113461936 - HS_0347a - hypothetical protein 353 38.51 0 353182..354765 + 527 113460494 cstA HS_0348 - carbon starvation protein A 354 38.13 0 354994..355452 + 152 113460495 mraZ HS_0349 - cell division protein MraZ 355 38.75 0 355570..356529 + 319 113460496 mraW HS_0350 - S-adenosyl-methyltransferase MraW 356 32.40 -1 356529..356849 + 106 113460497 ftsL HS_0351 - cell division protein 357 36.61 0 356874..358673 + 599 113460498 ftsI HS_0352 - peptidoglycan synthetase FtsI 358 38.84 0 358689..360176 + 495 113460499 murE HS_0353 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 359 37.71 0 360257..361651 + 464 113460500 murF HS_0354 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 360 38.03 0 361645..362730 + 361 113460501 mraY HS_0355 - phospho-N-acetylmuramoyl-pentapeptide-transferase 361 38.98 0 362739..364049 + 436 113460502 murD HS_0356 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 362 35.95 0 364063..365247 + 394 113460503 ftsW HS_0357 - cell division protein 363 38.92 0 365263..366336 + 357 113460504 murG HS_0358 - N-acetylglucosaminyl transferase 364 41.16 +1 366390..367820 + 476 113460505 murC HS_0359 - UDP-N-acetylmuramate--L-alanine ligase 365 40.78 +1 367865..368791 + 308 113460506 ddl HS_0360 - D-alanine--D-alanine ligase 366 32.43 -1 368792..369565 + 257 113460507 ftsQ HS_0361 - cell division protein 367 37.65 0 369596..370870 + 424 113460508 fstA HS_0362 - cell division protein FtsA 368 41.13 +1 371056..372171 + 371 113460509 ftsZ HS_0363 - cell division protein FtsZ 369 36.60 0 372212..373129 + 305 113460510 lpxC HS_0364 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 370 34.72 0 373254..374411 + 385 113460511 pheA HS_0365 - chorismate mutase / prephenate dehydratase 371 38.78 0 374473..375261 - 262 113460512 comL HS_0366 - DNA uptake lipoprotein 372 39.54 0 375371..376336 + 321 113460513 rluD HS_0367 - 23S rRNA pseudouridine synthase D 373 40.22 0 376338..377078 + 246 113460514 - HS_0368 - hypothetical protein 374 40.48 0 377132..378082 - 316 113460515 cysK HS_0369 - cysteine synthase 375 35.66 0 378200..378973 - 257 113460516 cysZ HS_0370 - putative sulfate transport protein CysZ 376 35.91 0 379133..380140 + 335 113460517 zipA HS_0371 - cell division protein ZipA 377 41.95 +1 380653..382323 + 556 113460518 - HS_0372 - putative ABC transporter ATP-binding protein 378 33.33 -1 382622..382969 + 115 113460519 - HS_0373 - hypothetical protein 379 30.00 -2 383108..383317 + 69 113460520 - HS_0374 - hypothetical protein 380 36.80 0 383505..384167 + 220 113460521 ktrA HS_0375 - K+ transporter 381 35.91 0 384157..385476 + 439 113460522 ktrB HS_0376 - cation transport protein 382 39.37 0 385592..387613 - 673 113460523 ligA HS_0377 - NAD-dependent DNA ligase LigA 383 40.82 +1 387723..389057 - 444 113460524 gntP HS_0378 - gluconate permease 384 38.73 0 389391..389909 + 172 113460525 glk HS_0379 - gluconate kinase 385 41.98 +1 390391..391419 + 342 113460526 - HS_0380 - periplasmic-binding protein 386 40.22 0 391450..391914 + 154 113460527 - HS_0381 - hypothetical protein 387 43.60 +1 391907..393883 + 658 113460528 - HS_0382 - integral membrane protein 388 38.63 0 394115..406831 - 4238 113460529 - HS_0383 - large adhesin 389 41.75 +1 407469..409049 + 526 113460530 prfC HS_0384 - peptide chain release factor 3 390 37.27 0 409166..411601 - 811 113460531 plsB HS_0385 - glycerol-3-phosphate acyltransferase 391 39.02 0 411763..412395 + 210 113460532 lexA HS_0386 - LexA repressor 392 35.68 0 412482..412907 - 141 113460533 ndk HS_0387 - nucleoside diphosphate kinase 393 38.80 0 412919..414217 - 432 113460534 pepB HS_0388 - aminopeptidase B 394 35.99 0 414327..414929 - 200 113460535 leuD HS_0389 - isopropylmalate isomerase small subunit 395 41.84 +1 414939..416348 - 469 113460536 leuC HS_0390 - isopropylmalate isomerase large subunit 396 40.02 0 416449..417525 - 358 113460537 leuB HS_0391 - 3-isopropylmalate dehydrogenase 397 39.25 0 417549..419102 - 517 113460538 leuA HS_0392 - 2-isopropylmalate synthase 398 37.00 0 419699..420352 + 217 113460539 ccmA HS_0393 - cytochrome c biogenesis protein CcmA 399 39.49 0 420349..421014 + 221 113460540 ccmB HS_0394 - heme ABC transporter, permease (heme exporter protein B) 400 37.98 0 421064..421795 + 243 113460541 ccmC HS_0395 - heme ABC transporter, permease (heme exporter protein C) 401 35.21 0 421805..422017 + 70 113460542 ccmD HS_0396 - heme ABC transporter, substrate-binding protein (heme exporter protein D) 402 37.90 0 422014..422538 + 174 113460543 ccmE HS_0397 - cytochrome c-type biogenesis protein CcmE 403 39.28 0 422535..424484 + 649 113460544 ccmF HS_0398 - cytochrome c-type biogenesis protein F 404 35.35 0 424488..425033 + 181 113460545 dsbE HS_0399 - cytochrome c-type biogenesis protein G 405 36.09 0 425030..425500 + 156 113460546 ccmH HS_0400 - cytochrome c-type biogenesis protein H 406 33.90 0 425504..426388 + 294 113460547 - HS_0401 - TPR repeat-containing cytochrome c-type biogenesis protein 407 34.84 0 426401..428257 + 618 113460548 arcB HS_0402 - sensor histidine kinase 408 36.47 0 428344..429300 + 318 113460549 - HS_0403 - hypothetical protein 409 41.19 +1 429307..430413 + 368 113460550 ispG HS_0404 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 410 39.05 0 430426..431703 + 425 113460551 hisS HS_0405 - histidyl-tRNA synthetase 411 35.95 0 431714..432325 + 203 113460552 - HS_0406 - hypothetical protein 412 39.43 0 432401..433828 + 475 113460553 attK HS_0407 - succinate semialdehyde dehydrogenase 413 38.90 0 433984..435240 - 418 113460554 proA HS_0408 - gamma-glutamyl phosphate reductase 414 37.95 0 435250..435921 - 223 113460555 - HS_0409 - hypothetical protein 415 34.01 0 436082..436669 - 195 113460556 tdk HS_0410 - thymidine kinase 416 40.62 0 436731..437759 - 342 113460557 gcp HS_0411 - O-sialoglycoprotein endopeptidase 417 38.39 0 437995..439101 + 368 113460558 dprA HS_0412 - DNA processing chain A 418 34.99 0 439084..439686 - 200 113460559 - HS_0413 - methylase 419 38.39 0 439750..441093 + 447 113460560 ftsY HS_0414 - signal recognition particle-docking protein FtsY 420 37.44 0 441256..442812 - 518 113460561 mviN HS_0415 - virulence factor 421 39.77 0 443105..443368 + 87 113460562 rpsT HS_0416 - 30S ribosomal protein S20 422 40.30 0 443430..445280 - 616 113460563 typA HS_0417 - GTP-binding protein 423 39.53 0 445523..446941 + 472 113460564 glnA HS_0418 - L-glutamine synthetase 424 34.08 0 447166..448098 - 310 113460565 birA HS_0419 - biotin--protein ligase 425 43.51 +1 448262..449725 + 487 113460566 guaB HS_0420 - inositol-5-monophosphate dehydrogenase 426 42.88 +1 449845..451416 + 523 113460567 guaA HS_0421 - bifunctional GMP synthase/glutamine amidotransferase protein 427 35.15 0 451591..452031 - 146 113460568 - HS_0422 - transcriptional regulator 428 33.76 0 452273..452509 + 78 113460569 - HS_0423 - phage-related protein 429 32.53 -1 452512..453636 + 374 113460570 - HS_0424 - phage integrase 430 30.03 -2 453626..453988 + 120 113460571 - HS_0425 - hypothetical protein 431 29.39 -2 454096..455007 + 303 113460572 - HS_0426 - phage DNA-polymerase or DNA-primase 432 33.26 -1 454967..456397 + 476 113460573 virE HS_0427 - virulence-associated protein E 433 30.70 -1 456719..457060 + 113 113460574 - HS_0428 - hypothetical protein 434 29.81 -2 457204..457629 + 141 113460575 - HS_0429 - hypothetical protein 435 31.76 -1 457622..459592 + 656 113460576 bcgIA HS_0430 - restriction enzyme, alpha subunit 436 26.74 -2 459573..460649 + 358 113460577 bcgIB HS_0431 - restriction enzyme, beta subunit 437 28.65 -2 460618..461151 + 177 113460578 bcgIB HS_0432 - restriction enzyme, beta subunit 438 30.87 -1 461158..462090 + 310 113460579 - HS_0433 - hypothetical protein 439 45.38 +2 463494..464132 + 212 113460580 alfA HS_0435 - alpha-L-fucosidase 440 44.66 +2 464154..464462 + 102 113460581 - HS_0436 - hypothetical protein 441 41.24 +1 464465..465805 + 446 113460582 - HS_0437 - PTS system, cellobiose-specific IIC component 442 43.33 +1 465880..466239 + 119 113460583 rusA HS_0438 - ribosomal small subunit pseudouridine synthase A 443 37.61 0 466559..466792 + 77 113460584 - HS_0439 - hypothetical protein 444 37.30 0 466802..467053 + 83 113460585 - HS_0440 - hypothetical protein 445 31.53 -1 467055..468053 + 332 113460586 - HS_0441 - cell filamentation-like protein 446 35.59 0 468080..468301 - 73 113460587 - HS_0442 - resolvase/integrase-like protein 447 33.48 -1 468440..469108 + 222 113460588 - HS_0443 - ParA-like protein 448 30.63 -1 469110..469553 + 147 113460589 - HS_0444 - hypothetical protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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