version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 131 39.07 0 118067..119425 - 452 113460278 trmE HS_0132 - tRNA modification GTPase TrmE 132 38.50 0 119511..121136 - 541 113460279 oxaA HS_0133 - putative inner membrane protein translocase component YidC 133 37.93 0 121136..121396 - 86 113460280 - HS_0134 - hypothetical protein 134 37.22 0 121360..121719 - 119 113460281 rnpA HS_0135 - ribonuclease P 135 42.96 +1 121734..121868 - 44 113461931 rpmH HS_0135a - 50S ribosomal protein L34 136 37.16 0 122211..123569 + 452 113460282 dnaA HS_0136 - chromosomal replication initiation protein 137 37.06 0 123581..124681 + 366 113460283 dnaN HS_0137 - DNA polymerase III subunit beta 138 36.86 0 124685..125761 + 358 113460284 recF HS_0138 - recombination protein F 139 36.59 0 125818..126462 - 214 113460285 crp HS_0139 - cAMP-regulatory protein 140 30.83 -1 126475..126714 - 79 113460286 - HS_0140 - hypothetical protein 141 36.21 0 126734..127393 - 219 113460287 slmA HS_0141 - nucleoid occlusion protein 142 36.84 0 127393..127848 - 151 113460288 dut HS_0142 - deoxyuridine 5'-triphosphate nucleotidohydrolase 143 38.96 0 127845..129071 - 408 113460289 coaBC HS_0143 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 144 33.93 0 129244..129912 + 222 113460290 radC HS_0144 - DNA repair protein RadC 145 43.88 +1 130133..130369 + 78 113460291 rpmB HS_0145 - 50S ribosomal protein L28 146 33.92 0 130381..130551 + 56 113461932 rpmG HS_0145a - 50S ribosomal protein L33 147 36.41 0 130656..131468 + 270 113460292 mutM HS_0146 - formamidopyrimidine-DNA glycosylase 148 39.77 0 131560..133236 + 558 113460293 ilvG HS_0147 - acetolactate synthase 2 catalytic subunit 149 33.79 0 133240..133458 + 72 113460294 ilvM HS_0148 - acetolactate synthase 2 regulatory subunit 150 36.95 0 133524..134186 + 220 113460295 - HS_0149 - hypothetical protein 151 34.92 0 134303..134806 + 167 113460296 ubiC HS_0150 - chorismate lyase 152 38.92 0 134810..137224 + 804 113460297 rnr HS_0151 - exoribonuclease II (ribonuclease R) 153 41.46 +1 137231..137968 + 245 113460298 - HS_0152 - 23S rRNA (guanosine-2'-O-)-methyltransferase 154 38.28 0 138109..138654 - 181 113460299 - HS_0153 - TPR repeat-containing protein 155 40.23 0 138698..139495 - 265 113460300 cysE HS_0154 - serine acetyltransferase 156 39.63 0 139497..140513 - 338 113460301 gpsA HS_0155 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 157 35.85 0 140580..141095 - 171 113460302 secB HS_0156 - preprotein translocase subunit SecB 158 33.11 -1 141106..141552 - 148 113460303 - HS_0157 - hypothetical protein 159 39.51 0 141796..143106 + 436 113460304 dcuB HS_0158 - anaerobic C4-dicarboxylate transporter 160 35.42 0 143179..144039 - 286 113460305 ubiA HS_0159 - 4-hydroxybenzoate octaprenyltransferase 161 33.12 -1 144024..144500 + 158 113460306 glpE HS_0160 - thiosulfate sulfurtransferase 162 32.15 -1 144524..144862 - 112 113460307 - HS_0161 - hypothetical protein 163 34.60 0 144882..145751 + 289 113460308 glpG HS_0162 - rhomboid family GlpG protein 164 39.43 0 145978..146502 + 174 113460309 - HS_0163 - hypothetical protein 165 41.52 +1 146520..146690 + 56 113461933 rpmF HS_0163a - 50S ribosomal protein L32 166 33.33 -1 146757..147089 + 110 113460310 plsX HS_0164 - fatty acid/phospholipid synthesis protein 167 39.22 0 147142..148092 + 316 113460311 fabH HS_0165 - 3-oxoacyl-(acyl carrier protein) synthase III 168 41.11 +1 148136..149074 + 312 113460312 fabD HS_0166 - [Acyl-carrier-protein] S-malonyltransferase 169 39.94 0 149128..149853 + 241 113460313 fabG HS_0167 - 3-ketoacyl-(acyl-carrier-protein) reductase 170 30.74 -1 150107..150337 + 76 113460314 acpP HS_0168 - acyl carrier protein 171 39.86 0 150486..150914 + 142 113460315 rplK HS_0169 - 50S ribosomal protein L11 172 39.42 0 150919..151608 + 229 113460316 rplA HS_0170 - 50S ribosomal protein L1 173 42.28 +1 151892..152383 + 163 113460317 rplJ HS_0171 - 50S ribosomal protein L10 174 39.57 0 152435..152803 + 122 113460318 rplL HS_0172 - 50S ribosomal protein L7/L12 175 39.00 0 153043..154242 - 399 113460319 rho HS_0173 - transcription termination factor Rho 176 36.67 0 154500..155759 + 419 113460320 rhlB HS_0174 - ATP-dependent RNA helicase RhlB 177 36.97 0 155873..156559 + 228 113460321 rpe HS_0175 - ribulose-phosphate 3-epimerase 178 34.96 0 156556..157230 + 224 113460322 gph HS_0176 - phosphoglycolate phosphatase 179 37.43 0 157240..158241 + 333 113460323 trpS HS_0177 - tryptophanyl-tRNA synthetase 180 31.52 -1 158460..158900 - 146 113460324 - HS_0178 - hypothetical protein 181 37.81 0 158953..159555 + 200 113460325 - HS_0179 - phosphatase 182 25.69 -2 159556..159843 - 95 113460326 - HS_0180 - hypothetical protein 183 38.17 0 159934..162681 - 915 113460327 - HS_0181 - TonB-dependent outer membrane receptor 184 38.51 0 162913..163530 - 205 113460328 - HS_0182 - hypothetical protein 185 38.74 0 163772..165307 + 511 113460329 ilvA HS_0183 - threonine dehydratase 186 40.30 0 165383..166315 - 310 113460330 ispH HS_0184 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 187 33.53 -1 166327..166824 - 165 113460331 lspA HS_0185 - lipoprotein signal peptidase 188 42.08 +1 166899..169712 - 937 113460332 ileS HS_0186 - isoleucyl-tRNA synthetase 189 34.43 0 169731..170279 - 182 113460333 - HS_0187 - hypothetical protein 190 36.61 0 170377..171321 - 314 113460334 ribF HS_0188 - bifunctional riboflavin kinase/FMN adenylyltransferase 191 36.21 0 171407..171892 - 161 113460335 folA HS_0189 - dihydrofolate reductase 192 38.54 0 171945..172424 - 159 113460336 - HS_0190 - hypothetical protein 193 36.38 0 172412..173200 - 262 113460337 - HS_0191 - hypothetical protein 194 40.16 0 173358..174470 + 370 113460338 proB HS_0192 - gamma-glutamyl kinase 195 40.54 0 174631..175185 - 184 113460339 nusG HS_0193 - transcription antitermination protein NusG 196 35.05 0 175187..175594 - 135 113460340 secE HS_0194 - preprotein translocase subunit SecE 197 43.21 +1 175770..176954 - 394 113460341 tufA HS_0195 - elongation factor Tu 198 34.07 0 177659..178612 + 317 113460342 coaA HS_0196 - pantothenate kinase 199 40.78 +1 178666..179874 - 402 113460343 gltS HS_0197 - sodium/glutamate symporter (glutamate permease) 200 39.49 0 180055..183531 - 1158 113460344 dnaE HS_0198 - DNA polymerase III subunit alpha 201 39.95 0 183692..186262 - 856 113460345 clpB HS_0199 - ATP-dependent Clp protease, subunit B 202 38.10 0 186446..186907 - 153 113460346 - HS_0200 - hypothetical protein 203 33.72 -1 187091..187348 + 85 113460347 oadG HS_0201 - oxaloacetate decarboxylase subunit gamma 204 41.39 +1 187361..189160 + 599 113460348 oadA HS_0202 - pyruvate carboxylase subunit B 205 42.73 +1 189212..190477 + 421 113460349 oadB HS_0203 - oxaloacetate decarboxylase beta subunit 206 37.11 0 190550..191503 - 317 113460350 tal HS_0204 - transaldolase B 207 36.32 0 191691..194036 + 781 113460351 imp HS_0205 - organic solvent tolerance protein 208 40.56 0 194113..195192 - 359 113460352 fba HS_0206 - fructose-bisphosphate aldolase 209 40.69 0 195284..196438 - 384 113460353 pgk HS_0207 - phosphoglycerate kinase 210 37.93 0 196692..196952 + 86 113460354 fdx HS_0208 - ferredoxin 211 40.60 0 197001..212432 - 5143 113460355 hsf HS_0209 - large adhesin 212 37.33 0 212868..213617 - 249 113460356 - HS_0210 - polar amino acid ABC transporter, ATP-binding protein 213 39.75 0 213631..214347 - 238 113460357 - HS_0211 - amino acid ABC transporter, permease 214 38.95 0 214337..215119 - 260 113460358 - HS_0212 - amino acid ABC transporter, substrate-binding 215 28.55 -2 215433..215996 - 187 113460359 - HS_0213 - hypothetical protein 216 26.30 -2 216015..216398 - 127 113460360 - HS_0214 - hypothetical protein 217 27.78 -2 216401..216868 - 155 113460361 - HS_0215 - hypothetical protein 218 33.33 -1 217020..218141 - 373 113460362 mloA HS_0216 - hypothetical protein 219 45.99 +2 218189..218512 - 107 113460363 - HS_0217 - hypothetical protein 220 34.38 0 219081..219368 + 95 113460364 - HS_0218 - hypothetical protein 221 37.58 0 219532..220920 - 462 113460365 - HS_0219 - NadC family transporter 222 39.32 0 221104..221604 - 166 113460366 rraA HS_0220 - ribonuclease activity regulator protein RraA 223 36.61 0 221651..222565 - 304 113460367 menA HS_0221 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 224 40.66 0 222663..223385 + 240 113460368 - HS_0222 - hypothetical protein 225 37.38 0 223545..223964 + 139 113460369 rbsD HS_0223 - D-ribose pyranase 226 30.65 -1 224095..224280 + 61 113460370 - HS_0224 - putative transposase 227 42.92 +1 224451..224690 + 79 113461934 - HS_0224a - transposase 228 41.51 +1 224788..225741 + 317 113460371 rbsK HS_0225 - ribokinase 229 39.86 0 225762..226772 + 336 113460372 rbsR HS_0226 - LacI family transcription regulator 230 35.66 0 226801..227187 - 128 113460373 smpA HS_0227 - small protein A 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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