version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1600 38.10 0 1815405..1817165 + 586 113461736 - HS_1600 - beta-hexosamidase A 1601 35.88 0 1817191..1818606 + 471 113461737 uidB HS_1601 - glucuronide permease 1602 39.30 0 1818628..1820019 + 463 113461738 uxaC HS_1602 - glucuronate isomerase 1603 41.43 +1 1820067..1820708 + 213 113461739 eda HS_1603 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1604 30.20 -2 1821128..1821382 + 84 113461740 - HS_1604 - hypothetical protein 1605 37.15 0 1821488..1822063 + 191 113461741 rpoE HS_1605 - RNA polymerase sigma factor RpoE 1606 36.75 0 1821979..1822680 + 233 113461742 rseA HS_1606 - sigma-E factor negative regulatory protein 1607 34.19 0 1822744..1823682 + 312 113461743 rseB HS_1607 - periplasmic negative regulator of sigmaE 1608 35.12 0 1823621..1824124 + 167 113461744 rseC HS_1608 - positive sigma-E factor regulatory protein 1609 39.39 0 1824009..1824635 + 208 113461745 mobB HS_1609 - molybdopterin-guanine dinucleotide biosynthesis protein B 1610 40.97 +1 1824790..1825614 + 274 113461746 dapF HS_1610 - diaminopimelate epimerase 1611 38.82 0 1825664..1826629 - 321 113461747 rfaC HS_1611 - ADP-heptose:LPS heptosyl transferase I 1612 40.54 0 1826631..1827671 - 346 113461748 rfaF HS_1612 - ADP-heptose--LPS heptosyltransferase II 1613 36.99 0 1827809..1828738 - 309 113461749 rfaD HS_1613 - ADP-L-glycero-D-mannoheptose-6-epimerase 1614 35.20 0 1828798..1830405 - 535 113461750 rmuC HS_1614 - DNA recombination protein rmuC 1615 42.78 +1 1830478..1831695 - 405 113461751 - HS_1615 - dehydrogenase 1616 39.29 0 1832041..1841277 - 3078 113461752 - HS_1616 - large adhesin 1617 40.31 0 1841800..1843833 + 677 113461753 uvrB HS_1617 - excinuclease ABC subunit B 1618 41.09 +1 1843804..1844280 - 158 113461754 - HS_1618 - tRNA-adenosine deaminase 1619 39.32 0 1844326..1845177 - 283 113461755 thyA HS_1619 - thymidylate synthase 1620 39.73 0 1845184..1845996 - 270 113461756 lgt HS_1620 - prolipoprotein diacylglyceryl transferase 1621 39.12 0 1846006..1846800 - 264 113461757 - HS_1621 - permease 1622 36.10 0 1846811..1847389 - 192 113461758 nudH HS_1622 - dinucleoside polyphosphate hydrolase 1623 41.56 +1 1847666..1848820 + 384 113461759 metK HS_1623 - S-adenosylmethionine synthetase 1624 37.25 0 1848898..1849407 + 169 113461760 sprT HS_1624 - hypothetical protein 1625 39.84 0 1849542..1851140 + 532 113461761 purH HS_1625 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1626 43.11 +1 1851189..1852487 + 432 113461762 purD HS_1626 - phosphoribosylamine--glycine ligase 1627 42.06 +1 1852630..1853889 + 419 113461763 glyA HS_1627 - serine hydroxymethyltransferase 1628 41.62 +1 1854069..1855685 + 538 113461764 pckA HS_1628 - phosphoenolpyruvate carboxykinase 1629 36.42 0 1855857..1856342 + 161 113461765 spoU HS_1629 - tRNA/rRNA methyltransferase 1630 34.30 0 1856359..1856772 + 137 113461766 - HS_1630 - hypothetical protein 1631 43.13 +1 1856829..1857410 + 193 113461767 slyD HS_1631 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 1632 41.49 +1 1858163..1866907 + 2914 113461768 - HS_1632 - large adhesin 1633 32.65 -1 1867240..1867530 - 96 113461769 - HS_1633 - hypothetical protein 1634 33.06 -1 1867542..1867904 - 120 113461770 - HS_1634 - hypothetical protein 1635 36.75 0 1867901..1868281 - 126 113461771 - HS_1635 - hypothetical protein 1636 37.07 0 1868281..1868949 - 222 113461772 - HS_1636 - hypothetical protein 1637 34.93 0 1869018..1869704 - 228 113461773 slyD HS_1637 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 1638 31.98 -1 1869801..1870022 + 73 113461774 slyX HS_1638 - hypothetical protein 1639 36.62 0 1870024..1870479 - 151 113461775 - HS_1639 - MutT/NUDIX family NTP pyrophosphohydrolase 1640 40.28 0 1870481..1871128 - 215 113461776 rluE HS_1640 - ribosomal large subunit pseudouridine synthase E 1641 39.25 0 1871215..1873428 - 737 113461777 icd HS_1641 - isocitrate dehydrogenase 1642 35.03 0 1873643..1874821 + 392 113461778 - HS_1642 - hypothetical protein 1643 39.84 0 1874882..1875634 + 250 113461779 - HS_1643 - hypothetical protein 1644 43.12 +1 1876089..1877273 - 394 113461780 tufA HS_1644 - elongation factor Tu 1645 40.61 0 1877345..1879447 - 700 113461781 fusA HS_1645 - elongation factor G 1646 42.89 +1 1879539..1880009 - 156 113461782 rpsG HS_1646 - 30S ribosomal protein S7 1647 44.00 +1 1880140..1880514 - 124 113461783 rpsL HS_1647 - 30S ribosomal protein S12 1648 36.35 0 1880673..1881533 - 286 113461784 hslO HS_1648 - Hsp33-like chaperonin 1649 40.39 0 1881589..1881999 - 136 113461785 hslR HS_1649 - heat shock protein 15 1650 37.33 0 1881915..1882889 + 324 113461786 cysQ HS_1650 - 3'-phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 1651 38.83 0 1882961..1884451 + 496 113461787 zwf HS_1651 - glucose-6-phosphate 1-dehydrogenase 1652 39.69 0 1884562..1885206 + 214 113461788 pgl HS_1652 - 6-phosphogluconolactonase 1653 33.33 -1 1885220..1885618 + 132 113461789 - HS_1653 - hypothetical protein 1654 42.06 +1 1885622..1887076 + 484 113461790 gnd HS_1654 - 6-phosphogluconate dehydrogenase 1655 39.33 0 1887245..1887994 + 249 113461791 vacJ HS_1655 - VacJ lipoprotein 1656 38.85 0 1888020..1888508 + 162 113461792 - HS_1656 - hypothetical protein 1657 37.67 0 1888559..1888858 - 99 113461793 - HS_1657 - hypothetical protein 1658 31.18 -1 1888884..1889441 - 185 113461794 - HS_1658 - integral membrane protein 1659 36.91 0 1889441..1890391 - 316 113461795 corA HS_1659 - magnesium/nickel/cobalt transporter CorA 1660 38.24 0 1890486..1890689 - 67 113461796 - HS_1660 - hypothetical protein 1661 36.58 0 1890726..1891064 - 112 113461797 - HS_1661 - hypothetical protein 1662 29.25 -2 1891162..1892091 - 309 113461798 - HS_1662 - LysR family transcriptional regulator 1663 35.92 0 1892159..1893628 + 489 113461799 - HS_1663 - permease 1664 39.09 0 1893567..1894244 + 225 113461800 gpm HS_1664 - phosphoglycerate mutase 1665 39.33 0 1894370..1894819 - 149 113461801 - HS_1665 - hypothetical protein 1666 37.17 0 1894831..1895586 - 251 113461802 trmB HS_1666 - tRNA (guanine-N(7))-methyltransferase 1667 38.54 0 1895732..1896844 + 370 113461803 mutY HS_1667 - A/G-specific DNA-adenine glycosylase 1668 35.51 0 1896847..1897122 + 91 113461804 - HS_1668 - hypothetical protein 1669 35.35 0 1897129..1898220 + 363 113461805 mltC HS_1669 - murein transglycosylase C 1670 45.15 +2 1898321..1899979 + 552 113461806 manB HS_1670 - phosphomannomutase 1671 38.66 0 1900106..1901587 - 493 113461807 ilvC HS_1671 - ketol-acid reductoisomerase 1672 35.98 0 1901844..1903013 + 389 113461808 torC HS_1672 - cytochrome c-type protein 1673 38.92 0 1903028..1905496 + 822 113461809 torA HS_1673 - trimethylamine-N-oxide reductase precursor 1674 32.30 -1 1905493..1906074 + 193 113461810 torD HS_1674 - chaperone protein TorD 1675 36.16 0 1906359..1906712 - 117 113461811 - HS_1675 - histone acetyltransferase 1676 33.69 -1 1906732..1907013 - 93 113461812 - HS_1676 - hypothetical protein 1677 39.05 0 1907010..1907219 - 69 113461813 - HS_1677 - hypothetical protein 1678 38.14 0 1907383..1907673 - 96 113461814 - HS_1678 - hypothetical protein 1679 37.61 0 1907757..1908410 + 217 113461815 - HS_1679 - transposase 1680 36.21 0 1909106..1909975 + 289 113461816 - HS_1680 - hypothetical protein 1681 40.74 +1 1910070..1910312 + 80 113461817 - HS_1681 - NAD-dependent aldehyde dehydrogenase 1682 31.31 -1 1910279..1910476 + 65 113461818 attK HS_1682 - aldehyde dehydrogenase 1683 36.28 0 1910523..1911674 - 383 113461819 trmU HS_1683 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1684 27.10 -2 1911709..1912221 - 170 113461820 - HS_1684 - hypothetical protein 1685 32.16 -1 1912262..1912516 - 84 113461821 - HS_1685 - hypothetical protein 1686 35.24 0 1912526..1913575 - 349 113461822 apbE HS_1686 - thiamine biosynthesis lipoprotein 1687 32.55 -1 1913591..1914103 - 170 113461823 msrAB HS_1687 - peptide methionine sulfoxide reductase msrA/msrB 1688 36.19 0 1914206..1915429 - 407 113461824 nqrF HS_1688 - Na(+)-translocating NADH-quinone reductase subunit F 1689 37.52 0 1915444..1916040 - 198 113461825 nqrE HS_1689 - Na(+)-translocating NADH-quinone reductase subunit E 1690 34.29 0 1916044..1916667 - 207 113461826 nqrD HS_1690 - Na(+)-translocating NADH-quinone reductase subunit D 1691 35.91 0 1916667..1917443 - 258 113461827 nqrC HS_1691 - Na(+)-translocating NADH-quinone reductase subunit C 1692 38.26 0 1917436..1918674 - 412 113461828 nqrB HS_1692 - Na(+)-translocating NADH-quinone reductase subunit B 1693 36.69 0 1918677..1920017 - 446 113461829 nqrA HS_1693 - Na(+)-translocating NADH-quinone reductase subunit A 1694 32.21 -1 1920345..1920701 - 118 113461830 bolA HS_1694 - transcriptional regulator BolA 1695 35.43 0 1920846..1921274 - 142 113461831 atpC HS_1695 - F0F1 ATP synthase subunit epsilon 1696 39.08 0 1921317..1922690 - 457 113461832 atpD HS_1696 - F0F1 ATP synthase subunit beta 1697 34.02 0 1922704..1923573 - 289 113461833 atpG HS_1697 - F0F1 ATP synthase subunit gamma 1698 38.13 0 1923597..1925138 - 513 113461834 atpA HS_1698 - F0F1 ATP synthase subunit alpha 1699 34.03 0 1925151..1925726 - 191 113461835 atpH HS_1699 - F0F1 ATP synthase subunit delta 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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