version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1546 36.67 0 1743543..1744232 - 229 113461682 yhhW HS_1546 - hypothetical protein 1547 37.71 0 1744385..1744681 - 98 113461683 - HS_1547 - hypothetical protein 1548 40.46 0 1744932..1746293 + 453 113461684 ompP1 HS_1548 - outer membrane protein P1 1549 39.04 0 1746347..1746889 + 180 113461685 dat1 HS_1549 - methylated-DNA-protein-cysteine methyltransferase 1550 42.22 +1 1746886..1747560 + 224 113461686 mutH HS_1550 - DNA mismatch repair protein 1551 40.56 0 1747749..1748786 + 345 113461687 purM HS_1551 - phosphoribosylaminoimidazole synthetase 1552 40.23 0 1748979..1750094 - 371 113461688 asd HS_1552 - aspartate-semialdehyde dehydrogenase 1553 33.87 0 1750221..1751159 - 312 113461689 ftsX HS_1553 - cell division protein FtsX 1554 38.25 0 1751169..1751819 - 216 113461690 ftsE HS_1554 - cell division ATP-binding protein FtsE 1555 37.85 0 1751946..1752986 - 346 113461691 holA HS_1555 - DNA polymerase III subunit delta 1556 36.31 0 1752986..1753489 - 167 113461692 - HS_1556 - rare lipoprotein B 1557 40.50 0 1753538..1756120 - 860 113461693 leuS HS_1557 - leucyl-tRNA synthetase 1558 38.20 0 1756407..1757228 - 273 113461694 apaH HS_1558 - diadenosine tetraphosphatase 1559 35.82 0 1757279..1758124 - 281 113461695 ksgA HS_1559 - dimethyladenosine transferase 1560 36.30 0 1758200..1759144 - 314 113461696 surA HS_1560 - peptidyl-prolyl cis-trans isomerase, PPIC-type 1561 37.73 0 1759227..1759817 - 196 113461697 pyrR HS_1561 - pyrimidine regulatory protein PyrR 1562 36.69 0 1759927..1761177 - 416 113461698 mtr HS_1562 - tryptophan-specific transport protein 1563 41.18 +1 1761577..1762494 + 305 113461699 - HS_1563 - hypothetical protein 1564 40.18 0 1762830..1767092 - 1420 113461700 rpoC HS_1564 - DNA-directed RNA polymerase subunit beta' 1565 38.42 0 1767183..1771211 - 1342 113461701 rpoB HS_1565 - DNA-directed RNA polymerase subunit beta 1566 37.71 0 1771715..1773040 - 441 113461702 dcuB HS_1566 - anaerobic C4-dicarboxylate transporter 1567 37.93 0 1773283..1773804 - 173 113461703 - HS_1567 - DMT family permease 1568 36.81 0 1773789..1774133 - 114 113461704 - HS_1568 - hypothetical protein 1569 33.72 -1 1780165..1780677 - 170 113461705 hemG HS_1569 - protoporphyrinogen oxidase 1570 36.95 0 1780677..1782140 - 487 113461706 trkH HS_1570 - potassium uptake system protein 1571 35.96 0 1782152..1782760 - 202 113461707 - HS_1571 - hypothetical protein 1572 30.42 -1 1782833..1783072 + 79 113461708 - HS_1572 - cell developmental protein SirA 1573 36.99 0 1783677..1785836 + 719 113461709 speF HS_1573 - ornithine decarboxylase 1574 37.91 0 1785893..1787203 + 436 113461710 potE HS_1574 - putrescine transporter 1575 38.75 0 1787321..1788058 + 245 113461711 - HS_1575 - hypothetical protein 1576 40.06 0 1788120..1789130 - 336 113461712 iolG HS_1576 - dehydrogenase 1577 37.24 0 1789132..1790028 - 298 113461713 iolE HS_1577 - myo-inositol catabolism protein 1578 39.73 0 1790102..1792039 - 645 113461714 iolD HS_1578 - myo-inositol catabolism protein 1579 39.29 0 1792226..1793182 - 318 113461715 rbsC HS_1579 - sugar ABC transporter permease 1580 37.02 0 1793220..1794737 - 505 113461716 - HS_1580 - sugar ABC transporter, ATP-binding protein 1581 36.01 0 1794818..1795750 - 310 113461717 - HS_1581 - ABC transporter, periplasmic sugar-binding protein 1582 38.89 0 1795838..1796773 - 311 113461718 - HS_1582 - ABC transporter, periplasmic sugar-binding protein 1583 38.61 0 1797067..1798203 - 378 113461719 - HS_1583 - dehydrogenase 1584 42.22 +1 1798287..1799783 - 498 113461720 - HS_1584 - methylmalonate-semialdehyde dehydrogenase [acylating] 1585 37.46 0 1799956..1800804 - 282 113461721 - HS_1585 - hypothetical protein 1586 37.37 0 1800815..1802200 - 461 113461722 - HS_1586 - major facilitator superfamily permease 1587 40.31 0 1802437..1803267 + 276 113461723 - HS_1587 - myo-inositol catabolism protein 1588 38.93 0 1803350..1805188 - 612 113461724 - HS_1588 - ABC transporter, ATP-binding/permease protein 1589 37.11 0 1805262..1805738 - 158 113461725 coaD HS_1589 - phosphopantetheine adenylyltransferase 1590 38.49 0 1805738..1807018 - 426 113461726 kdtA HS_1590 - 3-deoxy-D-manno-octulosonic-acid transferase 1591 41.02 +1 1807116..1807883 - 255 113461727 tpiA HS_1591 - triosephosphate isomerase 1592 32.88 -1 1808051..1808488 + 145 113461728 - HS_1592 - acetyltransferase 1593 37.57 0 1808568..1809935 - 455 113461729 purB HS_1593 - adenylosuccinate lyase 1594 39.22 0 1809958..1810569 - 203 113461730 - HS_1594 - hypothetical protein 1595 34.28 0 1810730..1811257 + 175 113461731 - HS_1595 - hypothetical protein 1596 41.10 +1 1811479..1812663 - 394 113461732 uxuA HS_1596 - mannonate dehydratase 1597 36.36 0 1812682..1813440 - 252 113461733 uxuR HS_1597 - GntR family transcriptional regulator 1598 36.05 0 1813693..1814538 + 281 113461734 - HS_1598 - D-mannonate oxidoreductase 1599 34.68 0 1814548..1815363 + 271 113461735 - HS_1599 - hypothetical protein 1600 38.10 0 1815405..1817165 + 586 113461736 - HS_1600 - beta-hexosamidase A 1601 35.88 0 1817191..1818606 + 471 113461737 uidB HS_1601 - glucuronide permease 1602 39.30 0 1818628..1820019 + 463 113461738 uxaC HS_1602 - glucuronate isomerase 1603 41.43 +1 1820067..1820708 + 213 113461739 eda HS_1603 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1604 30.20 -2 1821128..1821382 + 84 113461740 - HS_1604 - hypothetical protein 1605 37.15 0 1821488..1822063 + 191 113461741 rpoE HS_1605 - RNA polymerase sigma factor RpoE 1606 36.75 0 1821979..1822680 + 233 113461742 rseA HS_1606 - sigma-E factor negative regulatory protein 1607 34.19 0 1822744..1823682 + 312 113461743 rseB HS_1607 - periplasmic negative regulator of sigmaE 1608 35.12 0 1823621..1824124 + 167 113461744 rseC HS_1608 - positive sigma-E factor regulatory protein 1609 39.39 0 1824009..1824635 + 208 113461745 mobB HS_1609 - molybdopterin-guanine dinucleotide biosynthesis protein B 1610 40.97 +1 1824790..1825614 + 274 113461746 dapF HS_1610 - diaminopimelate epimerase 1611 38.82 0 1825664..1826629 - 321 113461747 rfaC HS_1611 - ADP-heptose:LPS heptosyl transferase I 1612 40.54 0 1826631..1827671 - 346 113461748 rfaF HS_1612 - ADP-heptose--LPS heptosyltransferase II 1613 36.99 0 1827809..1828738 - 309 113461749 rfaD HS_1613 - ADP-L-glycero-D-mannoheptose-6-epimerase 1614 35.20 0 1828798..1830405 - 535 113461750 rmuC HS_1614 - DNA recombination protein rmuC 1615 42.78 +1 1830478..1831695 - 405 113461751 - HS_1615 - dehydrogenase 1616 39.29 0 1832041..1841277 - 3078 113461752 - HS_1616 - large adhesin 1617 40.31 0 1841800..1843833 + 677 113461753 uvrB HS_1617 - excinuclease ABC subunit B 1618 41.09 +1 1843804..1844280 - 158 113461754 - HS_1618 - tRNA-adenosine deaminase 1619 39.32 0 1844326..1845177 - 283 113461755 thyA HS_1619 - thymidylate synthase 1620 39.73 0 1845184..1845996 - 270 113461756 lgt HS_1620 - prolipoprotein diacylglyceryl transferase 1621 39.12 0 1846006..1846800 - 264 113461757 - HS_1621 - permease 1622 36.10 0 1846811..1847389 - 192 113461758 nudH HS_1622 - dinucleoside polyphosphate hydrolase 1623 41.56 +1 1847666..1848820 + 384 113461759 metK HS_1623 - S-adenosylmethionine synthetase 1624 37.25 0 1848898..1849407 + 169 113461760 sprT HS_1624 - hypothetical protein 1625 39.84 0 1849542..1851140 + 532 113461761 purH HS_1625 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1626 43.11 +1 1851189..1852487 + 432 113461762 purD HS_1626 - phosphoribosylamine--glycine ligase 1627 42.06 +1 1852630..1853889 + 419 113461763 glyA HS_1627 - serine hydroxymethyltransferase 1628 41.62 +1 1854069..1855685 + 538 113461764 pckA HS_1628 - phosphoenolpyruvate carboxykinase 1629 36.42 0 1855857..1856342 + 161 113461765 spoU HS_1629 - tRNA/rRNA methyltransferase 1630 34.30 0 1856359..1856772 + 137 113461766 - HS_1630 - hypothetical protein 1631 43.13 +1 1856829..1857410 + 193 113461767 slyD HS_1631 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 1632 41.49 +1 1858163..1866907 + 2914 113461768 - HS_1632 - large adhesin 1633 32.65 -1 1867240..1867530 - 96 113461769 - HS_1633 - hypothetical protein 1634 33.06 -1 1867542..1867904 - 120 113461770 - HS_1634 - hypothetical protein 1635 36.75 0 1867901..1868281 - 126 113461771 - HS_1635 - hypothetical protein 1636 37.07 0 1868281..1868949 - 222 113461772 - HS_1636 - hypothetical protein 1637 34.93 0 1869018..1869704 - 228 113461773 slyD HS_1637 - FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) 1638 31.98 -1 1869801..1870022 + 73 113461774 slyX HS_1638 - hypothetical protein 1639 36.62 0 1870024..1870479 - 151 113461775 - HS_1639 - MutT/NUDIX family NTP pyrophosphohydrolase 1640 40.28 0 1870481..1871128 - 215 113461776 rluE HS_1640 - ribosomal large subunit pseudouridine synthase E 1641 39.25 0 1871215..1873428 - 737 113461777 icd HS_1641 - isocitrate dehydrogenase 1642 35.03 0 1873643..1874821 + 392 113461778 - HS_1642 - hypothetical protein 1643 39.84 0 1874882..1875634 + 250 113461779 - HS_1643 - hypothetical protein 1644 43.12 +1 1876089..1877273 - 394 113461780 tufA HS_1644 - elongation factor Tu 1645 40.61 0 1877345..1879447 - 700 113461781 fusA HS_1645 - elongation factor G 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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