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Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1486 36.96 0 1673753..1674358 + 201 113461622 - HS_1481 - hypothetical protein 1487 38.30 0 1674402..1674824 + 140 113461623 - HS_1482 - hypothetical protein 1488 36.05 0 1674968..1676257 - 429 113461624 - HS_1483 - hypothetical protein 1489 35.61 0 1676318..1676845 - 175 113461625 - HS_1484 - hypothetical protein 1490 38.11 0 1676873..1677646 - 257 113461626 - HS_1485 - hypothetical protein 1491 36.83 0 1677664..1678722 - 352 113461627 holB HS_1486 - DNA polymerase III subunit delta' 1492 40.13 0 1678646..1679278 - 210 113461628 tdk HS_1487 - thymidylate kinase 1493 37.75 0 1679288..1680328 - 346 113461629 - HS_1488 - hypothetical protein 1494 34.93 0 1680460..1681272 - 270 113461630 - HS_1489 - Cof-like hydrolase 1495 35.05 0 1681419..1682117 + 232 113461631 comF HS_1490 - competence protein 1496 38.83 0 1682210..1682791 + 193 113461632 - HS_1491 - putative DNA uptake protein 1497 34.78 0 1682829..1684145 - 438 113461633 brnQ HS_1492 - branched-chain amino acid carrier protein 1498 39.58 0 1684212..1686515 - 767 113461634 tex HS_1493 - transcription accessory protein 1499 39.62 0 1686695..1687171 + 158 113461635 greB HS_1494 - transcription elongation factor GreB 1500 29.79 -2 1687181..1687462 + 93 113461636 ftsB HS_1495 - cell division protein FtsB 1501 37.28 0 1687463..1688146 + 227 113461637 ispD HS_1496 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1502 39.26 0 1688152..1689957 + 601 113461638 kefBC HS_1497 - glutathione-regulated potassium-efflux system protein 1503 39.26 0 1689970..1690458 + 162 113461639 ispF HS_1498 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1504 38.00 0 1690458..1691465 + 335 113461640 truD HS_1499 - tRNA pseudouridine synthase D 1505 40.08 0 1691489..1692229 + 246 113461641 surE HS_1500 - stationary phase survival protein SurE 1506 35.59 0 1692259..1692834 + 191 113461642 lppB HS_1501 - lipoprotein B 1507 34.48 0 1693040..1693912 + 290 113461643 lppB HS_1502 - lipoprotein B 1508 42.19 +1 1694093..1697986 + 1297 113461644 purL HS_1503 - phosphoribosylformylglycinamidine synthase 1509 38.24 0 1698081..1698692 - 203 113461645 napC HS_1504 - periplasmic nitrate reductase subunit NapC 1510 38.77 0 1698707..1699129 - 140 113461646 napB HS_1505 - periplasmic nitrate reductase subunit NapB 1511 38.95 0 1699129..1700001 - 290 113461647 napH HS_1506 - quinol dehydrogenase membrane component 1512 42.10 +1 1700001..1700753 - 250 113461648 napG HS_1507 - quinol dehydrogenase periplasmic component 1513 40.38 0 1700804..1703287 - 827 113461649 napA HS_1508 - nitrate reductase 1514 35.24 0 1703314..1703784 - 156 113461650 napD HS_1509 - periplasmic nitrate reductase chaperone NapD 1515 35.89 0 1703916..1705637 + 573 113461651 narQ HS_1510 - nitrate/nitrite sensor protein NarQ 1516 35.77 0 1705647..1706672 + 341 113461652 murB HS_1511 - UDP-N-acetylenolpyruvoylglucosamine reductase 1517 40.59 0 1706889..1707977 + 362 113461653 - HS_1512 - hypothetical protein 1518 38.83 0 1708378..1708905 + 175 113461654 ppa HS_1513 - inorganic pyrophosphatase 1519 38.95 0 1708964..1709728 + 254 113461655 - HS_1514 - hypothetical protein 1520 40.54 0 1709791..1710456 - 221 113461656 rluA HS_1515 - ribosomal large subunit pseudouridine synthase A 1521 38.64 0 1710458..1713358 - 966 113461657 hepA HS_1516 - ATP-dependent helicase HepA 1522 38.19 0 1713526..1714122 - 198 113461658 cutC HS_1517 - copper homeostasis protein 1523 31.70 -1 1714235..1714540 - 101 113461659 - HS_1518 - hypothetical protein 1524 41.50 +1 1714824..1715582 + 252 113461660 udp HS_1519 - uridine phosphorylase 1525 34.58 0 1721371..1722489 + 372 113461661 - HS_1521 - CdaR family transcriptional regulator 1526 42.69 +1 1723902..1725044 + 380 113461662 glxK HS_1524 - glycerate kinase 1527 35.06 0 1726631..1727497 + 288 113461663 - HS_1527 - hypothetical protein 1528 29.60 -2 1727606..1727926 + 106 113461664 - HS_1528 - hypothetical protein 1529 27.13 -2 1728121..1728684 + 187 113461665 - HS_1529 - hypothetical protein 1530 28.79 -2 1728711..1728974 + 87 113461666 - HS_1530 - hypothetical protein 1531 27.35 -2 1728992..1729492 + 166 113461667 - HS_1531 - hypothetical protein 1532 36.22 0 1729835..1730389 - 184 113461668 - HS_1532 - D,D-heptose 1,7-bisphosphate phosphatase 1533 36.90 0 1730544..1731581 + 345 113461669 metN HS_1533 - DL-methionine transporter ATP-binding subunit 1534 37.25 0 1731571..1732260 + 229 113461670 metI HS_1534 - D-methionine ABC transporter, permease 1535 33.94 0 1732296..1733126 + 276 113461671 plpA HS_1535 - outer membrane lipoprotein 1 precursor 1536 39.12 0 1733284..1735116 - 610 113461672 glmS HS_1536 - D-fructose-6-phosphate amidotransferase 1537 36.53 0 1735142..1735924 - 260 113461673 - HS_1537 - DeoR family transcriptional regulator 1538 38.04 0 1736080..1736355 - 91 113461674 hupA HS_1538 - DNA-binding protein HU 1539 30.83 -1 1736514..1737113 - 199 113461675 - HS_1539 - hypothetical protein 1540 42.25 +1 1737121..1738185 - 354 113461676 uroD HS_1540 - uroporphyrinogen decarboxylase 1541 41.29 +1 1738491..1739018 + 175 113461677 hslV HS_1541 - ATP-dependent protease peptidase subunit 1542 40.09 0 1739036..1740367 + 443 113461678 hslU HS_1542 - ATP-dependent protease ATP-binding subunit 1543 39.88 0 1740598..1741956 + 452 113461679 - HS_1543 - outer membrane protein 1544 36.51 0 1742156..1742470 + 104 113461680 - HS_1544 - hypothetical protein 1545 38.67 0 1742593..1743435 + 280 113461681 rpoH HS_1545 - RNA polymerase factor sigma-32 1546 36.67 0 1743543..1744232 - 229 113461682 yhhW HS_1546 - hypothetical protein 1547 37.71 0 1744385..1744681 - 98 113461683 - HS_1547 - hypothetical protein 1548 40.46 0 1744932..1746293 + 453 113461684 ompP1 HS_1548 - outer membrane protein P1 1549 39.04 0 1746347..1746889 + 180 113461685 dat1 HS_1549 - methylated-DNA-protein-cysteine methyltransferase 1550 42.22 +1 1746886..1747560 + 224 113461686 mutH HS_1550 - DNA mismatch repair protein 1551 40.56 0 1747749..1748786 + 345 113461687 purM HS_1551 - phosphoribosylaminoimidazole synthetase 1552 40.23 0 1748979..1750094 - 371 113461688 asd HS_1552 - aspartate-semialdehyde dehydrogenase 1553 33.87 0 1750221..1751159 - 312 113461689 ftsX HS_1553 - cell division protein FtsX 1554 38.25 0 1751169..1751819 - 216 113461690 ftsE HS_1554 - cell division ATP-binding protein FtsE 1555 37.85 0 1751946..1752986 - 346 113461691 holA HS_1555 - DNA polymerase III subunit delta 1556 36.31 0 1752986..1753489 - 167 113461692 - HS_1556 - rare lipoprotein B 1557 40.50 0 1753538..1756120 - 860 113461693 leuS HS_1557 - leucyl-tRNA synthetase 1558 38.20 0 1756407..1757228 - 273 113461694 apaH HS_1558 - diadenosine tetraphosphatase 1559 35.82 0 1757279..1758124 - 281 113461695 ksgA HS_1559 - dimethyladenosine transferase 1560 36.30 0 1758200..1759144 - 314 113461696 surA HS_1560 - peptidyl-prolyl cis-trans isomerase, PPIC-type 1561 37.73 0 1759227..1759817 - 196 113461697 pyrR HS_1561 - pyrimidine regulatory protein PyrR 1562 36.69 0 1759927..1761177 - 416 113461698 mtr HS_1562 - tryptophan-specific transport protein 1563 41.18 +1 1761577..1762494 + 305 113461699 - HS_1563 - hypothetical protein 1564 40.18 0 1762830..1767092 - 1420 113461700 rpoC HS_1564 - DNA-directed RNA polymerase subunit beta' 1565 38.42 0 1767183..1771211 - 1342 113461701 rpoB HS_1565 - DNA-directed RNA polymerase subunit beta 1566 37.71 0 1771715..1773040 - 441 113461702 dcuB HS_1566 - anaerobic C4-dicarboxylate transporter 1567 37.93 0 1773283..1773804 - 173 113461703 - HS_1567 - DMT family permease 1568 36.81 0 1773789..1774133 - 114 113461704 - HS_1568 - hypothetical protein 1569 33.72 -1 1780165..1780677 - 170 113461705 hemG HS_1569 - protoporphyrinogen oxidase 1570 36.95 0 1780677..1782140 - 487 113461706 trkH HS_1570 - potassium uptake system protein 1571 35.96 0 1782152..1782760 - 202 113461707 - HS_1571 - hypothetical protein 1572 30.42 -1 1782833..1783072 + 79 113461708 - HS_1572 - cell developmental protein SirA 1573 36.99 0 1783677..1785836 + 719 113461709 speF HS_1573 - ornithine decarboxylase 1574 37.91 0 1785893..1787203 + 436 113461710 potE HS_1574 - putrescine transporter 1575 38.75 0 1787321..1788058 + 245 113461711 - HS_1575 - hypothetical protein 1576 40.06 0 1788120..1789130 - 336 113461712 iolG HS_1576 - dehydrogenase 1577 37.24 0 1789132..1790028 - 298 113461713 iolE HS_1577 - myo-inositol catabolism protein 1578 39.73 0 1790102..1792039 - 645 113461714 iolD HS_1578 - myo-inositol catabolism protein 1579 39.29 0 1792226..1793182 - 318 113461715 rbsC HS_1579 - sugar ABC transporter permease 1580 37.02 0 1793220..1794737 - 505 113461716 - HS_1580 - sugar ABC transporter, ATP-binding protein 1581 36.01 0 1794818..1795750 - 310 113461717 - HS_1581 - ABC transporter, periplasmic sugar-binding protein 1582 38.89 0 1795838..1796773 - 311 113461718 - HS_1582 - ABC transporter, periplasmic sugar-binding protein 1583 38.61 0 1797067..1798203 - 378 113461719 - HS_1583 - dehydrogenase 1584 42.22 +1 1798287..1799783 - 498 113461720 - HS_1584 - methylmalonate-semialdehyde dehydrogenase [acylating] 1585 37.46 0 1799956..1800804 - 282 113461721 - HS_1585 - hypothetical protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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