version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1440 36.14 0 1620446..1621690 + 414 113461576 clpX HS_1433 - ATP-dependent protease ATP-binding subunit 1441 46.30 +2 1622188..1623375 - 395 113461577 amaA HS_1434 - N-acyl-L-amino acid amidohydrolase 1442 41.11 +1 1623908..1624357 - 149 113461578 rplI HS_1435 - 50S ribosomal protein L9 1443 41.23 +1 1624376..1624603 - 75 113461579 rpsR HS_1436 - 30S ribosomal protein S18 1444 34.86 0 1624616..1624942 - 108 113461580 priB HS_1437 - primosomal replication protein N 1445 42.86 +1 1624929..1625306 - 125 113461581 rpsF HS_1438 - 30S ribosomal protein S6 1446 36.65 0 1625558..1626280 - 240 113461582 - HS_1439 - MgtC family membrane protein 1447 37.33 0 1626397..1627398 - 333 113461583 asnA HS_1440 - asparagine synthetase AsnA 1448 34.22 0 1627573..1628025 + 150 113461584 asnC HS_1441 - DNA-binding transcriptional regulator AsnC 1449 37.76 0 1628080..1628892 - 270 113461585 - HS_1442 - hypothetical protein 1450 35.77 0 1628939..1630171 - 410 113461586 - HS_1443 - hypothetical protein 1451 39.26 0 1630263..1631594 - 443 113461587 - HS_1444 - hypothetical protein 1452 39.04 0 1631734..1632417 - 227 113461588 gpmA HS_1445 - phosphoglycerate mutase 1453 35.59 0 1632653..1633405 + 250 113461589 fucR HS_1446 - L-fucose operon activator 1454 36.35 0 1633660..1634952 + 430 113461590 fucP HS_1447 - L-fucose permease 1455 41.26 +1 1635148..1636914 + 588 113461591 fucI HS_1448 - L-fucose isomerase 1456 37.79 0 1636996..1638453 + 485 113461592 fucK HS_1449 - L-fuculokinase 1457 37.70 0 1638447..1638881 + 144 113461593 fucU HS_1450 - fucose operon fucU protein 1458 35.03 0 1638895..1639542 + 215 113461594 fucA HS_1451 - L-fuculose phosphate aldolase 1459 35.79 0 1639764..1640048 + 94 113461595 - HS_1452 - hypothetical protein 1460 33.08 -1 1645935..1646738 - 267 113461596 murI HS_1453 - glutamate racemase 1461 39.63 0 1646808..1648889 - 693 113461597 recG HS_1454 - ATP-dependent DNA helicase 1462 39.31 0 1648889..1651012 - 707 113461598 spoT HS_1455 - guanosine-3'5'-bis(diphosphate) 3'- pyrophosphohydrolase 1463 37.36 0 1651093..1651365 - 90 113461599 rpoZ HS_1456 - DNA-directed RNA polymerase subunit omega 1464 34.90 0 1651420..1652058 - 212 113461600 gmk HS_1457 - guanylate kinase 1465 31.46 -1 1652155..1652955 - 266 113461601 licD HS_1458 - lipopolysaccharide choline phosphotransferase 1466 27.47 -2 1652957..1653655 - 232 113461602 licC HS_1459 - LicC protein 1467 29.69 -2 1653652..1654584 - 310 113461603 licB HS_1460 - lic-1 operon protein (LicB) 1468 26.12 -2 1654571..1655374 - 267 113461604 licA HS_1461 - LicA protein 1469 46.35 +2 1656140..1656331 + 63 113461605 - HS_1464 - hypothetical protein 1470 44.76 +2 1656163..1656372 + 69 113461606 - HS_1465 - hypothetical protein 1471 38.51 0 1656605..1657609 + 334 113461607 gapA HS_1466 - glyceraldehyde-3-phosphate dehydrogenase 1472 38.68 0 1657785..1658252 - 155 113461608 nrdG HS_1467 - anaerobic ribonucleotide reductase-activating protein 1473 37.14 0 1658268..1660394 - 708 113461609 nrdD HS_1468 - anaerobic ribonucleoside triphosphate reductase 1474 35.61 0 1660679..1662475 - 598 113461610 - HS_1469 - ABC transporter, ATP-binding/permease protein 1475 38.94 0 1662669..1664327 + 552 113461611 - HS_1470 - hypothetical protein 1476 36.32 0 1664281..1664481 - 66 113461612 - HS_1471 - hypothetical protein 1477 38.46 0 1664502..1664735 + 77 113461613 rpmE HS_1472 - 50S ribosomal protein L31P 1478 38.99 0 1664811..1665500 - 229 113461614 pfs HS_1473 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1479 38.79 0 1665695..1667416 - 573 113461615 recJ HS_1474 - single-strand DNA-specific exonuclease 1480 32.19 -1 1667409..1668107 - 232 113461616 dsbC HS_1475 - thiol:disulfide interchange protein 1481 41.51 +1 1668554..1669336 + 260 113461617 prfB HS_1476 - peptide chain release factor 2 1482 39.17 0 1669414..1670922 + 502 113461618 lysS HS_1477 - lysyl-tRNA synthetase 1483 36.80 0 1670973..1671203 - 76 113461619 - HS_1478 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1484 36.93 0 1671213..1672325 - 370 113461620 bcr HS_1479 - bicyclomycin/multidrug efflux system 1485 39.65 0 1672855..1673424 + 189 113461621 - HS_1480 - permease 1486 36.96 0 1673753..1674358 + 201 113461622 - HS_1481 - hypothetical protein 1487 38.30 0 1674402..1674824 + 140 113461623 - HS_1482 - hypothetical protein 1488 36.05 0 1674968..1676257 - 429 113461624 - HS_1483 - hypothetical protein 1489 35.61 0 1676318..1676845 - 175 113461625 - HS_1484 - hypothetical protein 1490 38.11 0 1676873..1677646 - 257 113461626 - HS_1485 - hypothetical protein 1491 36.83 0 1677664..1678722 - 352 113461627 holB HS_1486 - DNA polymerase III subunit delta' 1492 40.13 0 1678646..1679278 - 210 113461628 tdk HS_1487 - thymidylate kinase 1493 37.75 0 1679288..1680328 - 346 113461629 - HS_1488 - hypothetical protein 1494 34.93 0 1680460..1681272 - 270 113461630 - HS_1489 - Cof-like hydrolase 1495 35.05 0 1681419..1682117 + 232 113461631 comF HS_1490 - competence protein 1496 38.83 0 1682210..1682791 + 193 113461632 - HS_1491 - putative DNA uptake protein 1497 34.78 0 1682829..1684145 - 438 113461633 brnQ HS_1492 - branched-chain amino acid carrier protein 1498 39.58 0 1684212..1686515 - 767 113461634 tex HS_1493 - transcription accessory protein 1499 39.62 0 1686695..1687171 + 158 113461635 greB HS_1494 - transcription elongation factor GreB 1500 29.79 -2 1687181..1687462 + 93 113461636 ftsB HS_1495 - cell division protein FtsB 1501 37.28 0 1687463..1688146 + 227 113461637 ispD HS_1496 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1502 39.26 0 1688152..1689957 + 601 113461638 kefBC HS_1497 - glutathione-regulated potassium-efflux system protein 1503 39.26 0 1689970..1690458 + 162 113461639 ispF HS_1498 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1504 38.00 0 1690458..1691465 + 335 113461640 truD HS_1499 - tRNA pseudouridine synthase D 1505 40.08 0 1691489..1692229 + 246 113461641 surE HS_1500 - stationary phase survival protein SurE 1506 35.59 0 1692259..1692834 + 191 113461642 lppB HS_1501 - lipoprotein B 1507 34.48 0 1693040..1693912 + 290 113461643 lppB HS_1502 - lipoprotein B 1508 42.19 +1 1694093..1697986 + 1297 113461644 purL HS_1503 - phosphoribosylformylglycinamidine synthase 1509 38.24 0 1698081..1698692 - 203 113461645 napC HS_1504 - periplasmic nitrate reductase subunit NapC 1510 38.77 0 1698707..1699129 - 140 113461646 napB HS_1505 - periplasmic nitrate reductase subunit NapB 1511 38.95 0 1699129..1700001 - 290 113461647 napH HS_1506 - quinol dehydrogenase membrane component 1512 42.10 +1 1700001..1700753 - 250 113461648 napG HS_1507 - quinol dehydrogenase periplasmic component 1513 40.38 0 1700804..1703287 - 827 113461649 napA HS_1508 - nitrate reductase 1514 35.24 0 1703314..1703784 - 156 113461650 napD HS_1509 - periplasmic nitrate reductase chaperone NapD 1515 35.89 0 1703916..1705637 + 573 113461651 narQ HS_1510 - nitrate/nitrite sensor protein NarQ 1516 35.77 0 1705647..1706672 + 341 113461652 murB HS_1511 - UDP-N-acetylenolpyruvoylglucosamine reductase 1517 40.59 0 1706889..1707977 + 362 113461653 - HS_1512 - hypothetical protein 1518 38.83 0 1708378..1708905 + 175 113461654 ppa HS_1513 - inorganic pyrophosphatase 1519 38.95 0 1708964..1709728 + 254 113461655 - HS_1514 - hypothetical protein 1520 40.54 0 1709791..1710456 - 221 113461656 rluA HS_1515 - ribosomal large subunit pseudouridine synthase A 1521 38.64 0 1710458..1713358 - 966 113461657 hepA HS_1516 - ATP-dependent helicase HepA 1522 38.19 0 1713526..1714122 - 198 113461658 cutC HS_1517 - copper homeostasis protein 1523 31.70 -1 1714235..1714540 - 101 113461659 - HS_1518 - hypothetical protein 1524 41.50 +1 1714824..1715582 + 252 113461660 udp HS_1519 - uridine phosphorylase 1525 34.58 0 1721371..1722489 + 372 113461661 - HS_1521 - CdaR family transcriptional regulator 1526 42.69 +1 1723902..1725044 + 380 113461662 glxK HS_1524 - glycerate kinase 1527 35.06 0 1726631..1727497 + 288 113461663 - HS_1527 - hypothetical protein 1528 29.60 -2 1727606..1727926 + 106 113461664 - HS_1528 - hypothetical protein 1529 27.13 -2 1728121..1728684 + 187 113461665 - HS_1529 - hypothetical protein 1530 28.79 -2 1728711..1728974 + 87 113461666 - HS_1530 - hypothetical protein 1531 27.35 -2 1728992..1729492 + 166 113461667 - HS_1531 - hypothetical protein 1532 36.22 0 1729835..1730389 - 184 113461668 - HS_1532 - D,D-heptose 1,7-bisphosphate phosphatase 1533 36.90 0 1730544..1731581 + 345 113461669 metN HS_1533 - DL-methionine transporter ATP-binding subunit 1534 37.25 0 1731571..1732260 + 229 113461670 metI HS_1534 - D-methionine ABC transporter, permease 1535 33.94 0 1732296..1733126 + 276 113461671 plpA HS_1535 - outer membrane lipoprotein 1 precursor 1536 39.12 0 1733284..1735116 - 610 113461672 glmS HS_1536 - D-fructose-6-phosphate amidotransferase 1537 36.53 0 1735142..1735924 - 260 113461673 - HS_1537 - DeoR family transcriptional regulator 1538 38.04 0 1736080..1736355 - 91 113461674 hupA HS_1538 - DNA-binding protein HU 1539 30.83 -1 1736514..1737113 - 199 113461675 - HS_1539 - hypothetical protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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