version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1386 31.69 -1 1571100..1571282 - 60 113461522 - HS_1379 - hypothetical protein 1387 40.26 0 1571380..1571682 - 100 113461523 - HS_1380 - transcription regulator 1388 41.01 +1 1572189..1580201 - 2670 113461524 - HS_1381 - hypothetical protein 1389 39.79 0 1580282..1580668 - 128 113461525 - HS_1382 - phage-related protein 1390 36.69 0 1580465..1580851 + 128 113461526 - HS_1383 - hypothetical protein 1391 42.09 +1 1581207..1583273 - 688 113461527 - HS_1384 - hypothetical protein 1392 41.54 +1 1583386..1584933 - 515 113461528 - HS_1385 - hypothetical protein 1393 38.79 0 1584933..1585628 - 231 113461529 - HS_1386 - terminase small subunit 1394 40.06 0 1585825..1586151 - 108 113461530 - HS_1387 - hypothetical protein 1395 42.27 +1 1586124..1586660 - 178 113461531 - HS_1388 - lysozyme, phage-related lysozyme 1396 39.66 0 1586653..1586889 - 78 113461532 - HS_1389 - hypothetical protein 1397 39.54 0 1587177..1588223 - 348 113461533 - HS_1390 - transposase 1398 36.45 0 1588360..1588776 + 138 113461534 - HS_1391 - transposase 1399 40.85 +1 1588836..1589234 - 132 113461535 - HS_1392 - hypothetical protein 1400 35.80 0 1589385..1589789 - 134 113461536 - HS_1393 - hypothetical protein 1401 39.54 0 1589779..1590390 - 203 113461537 - HS_1394 - NinG recombination protein 1402 41.94 +1 1590548..1590733 + 61 113461538 - HS_1395 - hypothetical protein 1403 43.48 +1 1590756..1591169 + 137 113461539 - HS_1396 - hypothetical protein 1404 38.23 0 1591256..1592215 - 319 113461540 - HS_1397 - hypothetical protein 1405 42.76 +1 1592579..1593193 + 204 113461541 - HS_1398 - prophage antirepressor 1406 37.75 0 1593245..1593697 - 150 113461542 - HS_1399 - hypothetical protein 1407 41.39 +1 1593710..1594243 - 177 113461543 - HS_1400 - DNA methylase 1408 42.71 +1 1594258..1594950 - 230 113461544 - HS_1401 - replication protein P 1409 39.27 0 1594947..1595738 - 263 113461545 - HS_1402 - hypothetical protein 1410 37.75 0 1595735..1595983 - 82 113461546 - HS_1403 - hypothetical protein 1411 43.27 +1 1596026..1596478 - 150 113461547 - HS_1404 - hypothetical protein 1412 34.78 0 1596523..1596729 - 68 113461548 - HS_1405 - hypothetical protein 1413 36.32 0 1596868..1597503 + 211 113461549 - HS_1406 - repressor protein 1414 33.05 -1 1597622..1598665 + 347 113461550 - HS_1407 - hypothetical protein 1415 34.85 0 1598658..1598921 + 87 113461551 - HS_1408 - hypothetical protein 1416 34.97 0 1598911..1599276 + 121 113461552 - HS_1409 - hypothetical protein 1417 39.70 0 1599786..1600052 + 88 113461553 - HS_1410 - hypothetical protein 1418 35.98 0 1600415..1600603 - 62 113461554 - HS_1411 - hypothetical protein 1419 35.95 0 1600832..1601518 + 228 113461555 - HS_1412 - hypothetical protein 1420 39.39 0 1601521..1601718 + 65 113461556 - HS_1413 - hypothetical protein 1421 30.67 -1 1602088..1602576 + 162 113461557 - HS_1414 - hypothetical protein 1422 34.38 0 1602930..1603595 + 221 113461558 - HS_1415 - prophage antirepressor 1423 42.46 +1 1603682..1603966 + 94 113461559 - HS_1416 - hypothetical protein 1424 36.30 0 1603963..1604400 + 145 113461560 - HS_1417 - hypothetical protein 1425 37.67 0 1604397..1604696 + 99 113461561 - HS_1418 - hypothetical protein 1426 40.06 0 1604708..1605643 + 311 113461562 - HS_1419 - phage recombinase 1427 40.66 0 1605636..1606304 + 222 113461563 - HS_1420 - hypothetical protein 1428 41.83 +1 1606354..1607412 + 352 113461564 - HS_1421 - hypothetical protein 1429 44.44 +2 1607441..1608538 + 365 113461565 - HS_1422 - DNA-cytosine methyltransferase 1430 36.72 0 1608571..1609368 + 265 113461566 - HS_1423 - hypothetical protein 1431 39.25 0 1609378..1609563 + 61 113461567 - HS_1424 - phage transcriptional regulator, AlpA 1432 35.91 0 1609525..1610766 - 413 113461568 - HS_1425 - integrase 1433 39.37 0 1611223..1612962 + 579 113461569 ychM HS_1426 - putative sulfate transporter YchM 1434 39.43 0 1613005..1614381 - 458 113461570 ffh HS_1427 - signal recognition particle subunit FFH/SRP54 (srp54) 1435 31.45 -1 1614531..1615328 + 265 113461571 - HS_1428 - permease 1436 34.52 0 1615398..1616657 + 419 113461572 - HS_1429 - transporter 1437 37.22 0 1616691..1618106 - 471 113461573 pilB HS_1430 - pilin/fimbriae biogenesis protein 1438 37.34 0 1618465..1619763 + 432 113461574 tig HS_1431 - trigger factor 1439 38.32 0 1619849..1620430 + 193 161486690 clpP HS_1432 - ATP-dependent Clp protease proteolytic subunit 1440 36.14 0 1620446..1621690 + 414 113461576 clpX HS_1433 - ATP-dependent protease ATP-binding subunit 1441 46.30 +2 1622188..1623375 - 395 113461577 amaA HS_1434 - N-acyl-L-amino acid amidohydrolase 1442 41.11 +1 1623908..1624357 - 149 113461578 rplI HS_1435 - 50S ribosomal protein L9 1443 41.23 +1 1624376..1624603 - 75 113461579 rpsR HS_1436 - 30S ribosomal protein S18 1444 34.86 0 1624616..1624942 - 108 113461580 priB HS_1437 - primosomal replication protein N 1445 42.86 +1 1624929..1625306 - 125 113461581 rpsF HS_1438 - 30S ribosomal protein S6 1446 36.65 0 1625558..1626280 - 240 113461582 - HS_1439 - MgtC family membrane protein 1447 37.33 0 1626397..1627398 - 333 113461583 asnA HS_1440 - asparagine synthetase AsnA 1448 34.22 0 1627573..1628025 + 150 113461584 asnC HS_1441 - DNA-binding transcriptional regulator AsnC 1449 37.76 0 1628080..1628892 - 270 113461585 - HS_1442 - hypothetical protein 1450 35.77 0 1628939..1630171 - 410 113461586 - HS_1443 - hypothetical protein 1451 39.26 0 1630263..1631594 - 443 113461587 - HS_1444 - hypothetical protein 1452 39.04 0 1631734..1632417 - 227 113461588 gpmA HS_1445 - phosphoglycerate mutase 1453 35.59 0 1632653..1633405 + 250 113461589 fucR HS_1446 - L-fucose operon activator 1454 36.35 0 1633660..1634952 + 430 113461590 fucP HS_1447 - L-fucose permease 1455 41.26 +1 1635148..1636914 + 588 113461591 fucI HS_1448 - L-fucose isomerase 1456 37.79 0 1636996..1638453 + 485 113461592 fucK HS_1449 - L-fuculokinase 1457 37.70 0 1638447..1638881 + 144 113461593 fucU HS_1450 - fucose operon fucU protein 1458 35.03 0 1638895..1639542 + 215 113461594 fucA HS_1451 - L-fuculose phosphate aldolase 1459 35.79 0 1639764..1640048 + 94 113461595 - HS_1452 - hypothetical protein 1460 33.08 -1 1645935..1646738 - 267 113461596 murI HS_1453 - glutamate racemase 1461 39.63 0 1646808..1648889 - 693 113461597 recG HS_1454 - ATP-dependent DNA helicase 1462 39.31 0 1648889..1651012 - 707 113461598 spoT HS_1455 - guanosine-3'5'-bis(diphosphate) 3'- pyrophosphohydrolase 1463 37.36 0 1651093..1651365 - 90 113461599 rpoZ HS_1456 - DNA-directed RNA polymerase subunit omega 1464 34.90 0 1651420..1652058 - 212 113461600 gmk HS_1457 - guanylate kinase 1465 31.46 -1 1652155..1652955 - 266 113461601 licD HS_1458 - lipopolysaccharide choline phosphotransferase 1466 27.47 -2 1652957..1653655 - 232 113461602 licC HS_1459 - LicC protein 1467 29.69 -2 1653652..1654584 - 310 113461603 licB HS_1460 - lic-1 operon protein (LicB) 1468 26.12 -2 1654571..1655374 - 267 113461604 licA HS_1461 - LicA protein 1469 46.35 +2 1656140..1656331 + 63 113461605 - HS_1464 - hypothetical protein 1470 44.76 +2 1656163..1656372 + 69 113461606 - HS_1465 - hypothetical protein 1471 38.51 0 1656605..1657609 + 334 113461607 gapA HS_1466 - glyceraldehyde-3-phosphate dehydrogenase 1472 38.68 0 1657785..1658252 - 155 113461608 nrdG HS_1467 - anaerobic ribonucleotide reductase-activating protein 1473 37.14 0 1658268..1660394 - 708 113461609 nrdD HS_1468 - anaerobic ribonucleoside triphosphate reductase 1474 35.61 0 1660679..1662475 - 598 113461610 - HS_1469 - ABC transporter, ATP-binding/permease protein 1475 38.94 0 1662669..1664327 + 552 113461611 - HS_1470 - hypothetical protein 1476 36.32 0 1664281..1664481 - 66 113461612 - HS_1471 - hypothetical protein 1477 38.46 0 1664502..1664735 + 77 113461613 rpmE HS_1472 - 50S ribosomal protein L31P 1478 38.99 0 1664811..1665500 - 229 113461614 pfs HS_1473 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1479 38.79 0 1665695..1667416 - 573 113461615 recJ HS_1474 - single-strand DNA-specific exonuclease 1480 32.19 -1 1667409..1668107 - 232 113461616 dsbC HS_1475 - thiol:disulfide interchange protein 1481 41.51 +1 1668554..1669336 + 260 113461617 prfB HS_1476 - peptide chain release factor 2 1482 39.17 0 1669414..1670922 + 502 113461618 lysS HS_1477 - lysyl-tRNA synthetase 1483 36.80 0 1670973..1671203 - 76 113461619 - HS_1478 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1484 36.93 0 1671213..1672325 - 370 113461620 bcr HS_1479 - bicyclomycin/multidrug efflux system 1485 39.65 0 1672855..1673424 + 189 113461621 - HS_1480 - permease 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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