version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 88 34.35 0 79692..80378 - 228 113460235 - HS_0086 - hypothetical protein 89 33.72 -1 80383..81660 - 425 113460236 nadR HS_0087 - nicotinamide-nucleotide adenylyltransferase 90 30.58 -1 81736..82026 - 96 113460237 - HS_0088 - hypothetical protein 91 43.04 +1 82323..82961 + 212 113460238 ribB HS_0089 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 92 42.49 +1 83118..83783 - 221 113460239 thiE HS_0090 - thiamine-phosphate pyrophosphorylase 93 41.70 +1 83783..84595 - 270 113460240 thiD HS_0091 - phosphomethylpyrimidine kinase 94 41.20 +1 84588..85388 - 266 113460241 thiM HS_0092 - hydroxyethylthiazole kinase 95 37.44 0 85961..86569 + 202 113460242 recO HS_0093 - DNA repair protein RecO 96 37.05 0 86590..87909 + 439 113460243 rumA HS_0094 - 23S rRNA 5-methyluridine methyltransferase 97 37.98 0 87921..90158 + 745 113460244 relA HS_0095 - GTP diphosphokinase (GTP pyrophosphokinase) 98 36.41 0 90183..90539 + 118 113460245 dgkA HS_0096 - diacylglycerol kinase 99 28.29 -2 92709..92966 + 85 113460246 - HS_0099 - hypothetical protein 100 27.78 -2 93052..93987 + 311 113460247 - HS_0100 - transcriptional regulator 101 29.46 -2 94032..94934 + 300 113460248 - HS_0101 - hypothetical protein 102 29.33 -2 95537..95761 + 74 113460249 - HS_0103 - hypothetical protein 103 42.07 +1 95721..96155 + 144 113460250 - HS_0104 - hypothetical protein 104 44.25 +2 96182..97399 + 405 113460251 fabF HS_0105 - 3-oxoacyl-[acyl-carrier-protein] synthase (beta-ketoacyl-ACP synthase) 105 41.28 +1 97401..97853 + 150 113460252 - HS_0106 - dehydratase 106 46.50 +2 97853..98581 + 242 113460253 fabG HS_0107 - 3-ketoacyl-(acyl-carrier-protein) reductase 107 44.23 +2 98654..99892 + 412 113460254 fab HS_0108 - 3-oxoacyl-[acyl-carrier-protein] synthase II 108 42.50 +1 100060..100812 + 250 113460255 - HS_0109 - hypothetical protein 109 40.16 0 100788..101549 + 253 113460256 plsC HS_0110 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 110 39.15 0 101553..101810 + 85 113460257 acp HS_0111 - acyl carrier protein 111 36.14 0 101826..102074 + 82 113460258 acp HS_0112 - acyl carrier protein 112 38.85 0 102135..102515 + 126 113460259 - HS_0113 - 3-hydroxymyristoyl/3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase 113 42.30 +1 102625..103059 + 144 113460260 - HS_0114 - hypothetical protein 114 42.06 +1 103052..104335 + 427 113460261 - HS_0115 - acyl-coenzyme A synthetase-related protein 115 39.09 0 104332..105060 + 242 113460262 - HS_0116 - glycosyl transferase, group 2 family protein 116 40.50 0 105057..105977 + 306 113460263 - HS_0117 - acyltransferase 117 38.03 0 105959..106426 + 155 113460264 - HS_0118 - hypothetical protein 118 38.06 0 106506..106949 + 147 113460265 - HS_0119 - thioesterase 119 34.86 0 106960..107547 + 195 113460266 - HS_0120 - hypothetical protein 120 37.61 0 107556..109847 + 763 113460267 - HS_0121 - hypothetical protein 121 37.23 0 109988..111220 - 410 113460268 serA HS_0122 - D-3-phosphoglycerate dehydrogenase 122 37.73 0 111246..111905 - 219 113460269 rpiA HS_0123 - ribose-5-phosphate isomerase A 123 36.30 0 112001..113179 - 392 113460270 - HS_0124 - coproporphyrinogen III oxidase 124 40.03 0 113179..113775 - 198 113460271 - HS_0125 - putative deoxyribonucleotide triphosphate pyrophosphatase 125 36.01 0 113965..114300 - 111 113460272 comEA HS_0126 - ComE operon protein (competence protein) 126 40.26 0 114522..114911 - 129 113460273 - HS_0127 - translation initiation inhibitor (endoribonuclease L-PSP) 127 32.65 -1 114972..115553 - 193 113460274 - HS_0128 - hypothetical protein 128 32.34 -1 115702..116709 - 335 113460275 pabB HS_0129 - para-aminobenzoate synthase component I 129 34.74 0 116766..117335 + 189 113460276 trpG HS_0130 - para-aminobenzoate synthase component II 130 32.92 -1 117488..117967 + 159 113460277 - HS_0131 - DNA-binding stress protein 131 39.07 0 118067..119425 - 452 113460278 trmE HS_0132 - tRNA modification GTPase TrmE 132 38.50 0 119511..121136 - 541 113460279 oxaA HS_0133 - putative inner membrane protein translocase component YidC 133 37.93 0 121136..121396 - 86 113460280 - HS_0134 - hypothetical protein 134 37.22 0 121360..121719 - 119 113460281 rnpA HS_0135 - ribonuclease P 135 42.96 +1 121734..121868 - 44 113461931 rpmH HS_0135a - 50S ribosomal protein L34 136 37.16 0 122211..123569 + 452 113460282 dnaA HS_0136 - chromosomal replication initiation protein 137 37.06 0 123581..124681 + 366 113460283 dnaN HS_0137 - DNA polymerase III subunit beta 138 36.86 0 124685..125761 + 358 113460284 recF HS_0138 - recombination protein F 139 36.59 0 125818..126462 - 214 113460285 crp HS_0139 - cAMP-regulatory protein 140 30.83 -1 126475..126714 - 79 113460286 - HS_0140 - hypothetical protein 141 36.21 0 126734..127393 - 219 113460287 slmA HS_0141 - nucleoid occlusion protein 142 36.84 0 127393..127848 - 151 113460288 dut HS_0142 - deoxyuridine 5'-triphosphate nucleotidohydrolase 143 38.96 0 127845..129071 - 408 113460289 coaBC HS_0143 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 144 33.93 0 129244..129912 + 222 113460290 radC HS_0144 - DNA repair protein RadC 145 43.88 +1 130133..130369 + 78 113460291 rpmB HS_0145 - 50S ribosomal protein L28 146 33.92 0 130381..130551 + 56 113461932 rpmG HS_0145a - 50S ribosomal protein L33 147 36.41 0 130656..131468 + 270 113460292 mutM HS_0146 - formamidopyrimidine-DNA glycosylase 148 39.77 0 131560..133236 + 558 113460293 ilvG HS_0147 - acetolactate synthase 2 catalytic subunit 149 33.79 0 133240..133458 + 72 113460294 ilvM HS_0148 - acetolactate synthase 2 regulatory subunit 150 36.95 0 133524..134186 + 220 113460295 - HS_0149 - hypothetical protein 151 34.92 0 134303..134806 + 167 113460296 ubiC HS_0150 - chorismate lyase 152 38.92 0 134810..137224 + 804 113460297 rnr HS_0151 - exoribonuclease II (ribonuclease R) 153 41.46 +1 137231..137968 + 245 113460298 - HS_0152 - 23S rRNA (guanosine-2'-O-)-methyltransferase 154 38.28 0 138109..138654 - 181 113460299 - HS_0153 - TPR repeat-containing protein 155 40.23 0 138698..139495 - 265 113460300 cysE HS_0154 - serine acetyltransferase 156 39.63 0 139497..140513 - 338 113460301 gpsA HS_0155 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 157 35.85 0 140580..141095 - 171 113460302 secB HS_0156 - preprotein translocase subunit SecB 158 33.11 -1 141106..141552 - 148 113460303 - HS_0157 - hypothetical protein 159 39.51 0 141796..143106 + 436 113460304 dcuB HS_0158 - anaerobic C4-dicarboxylate transporter 160 35.42 0 143179..144039 - 286 113460305 ubiA HS_0159 - 4-hydroxybenzoate octaprenyltransferase 161 33.12 -1 144024..144500 + 158 113460306 glpE HS_0160 - thiosulfate sulfurtransferase 162 32.15 -1 144524..144862 - 112 113460307 - HS_0161 - hypothetical protein 163 34.60 0 144882..145751 + 289 113460308 glpG HS_0162 - rhomboid family GlpG protein 164 39.43 0 145978..146502 + 174 113460309 - HS_0163 - hypothetical protein 165 41.52 +1 146520..146690 + 56 113461933 rpmF HS_0163a - 50S ribosomal protein L32 166 33.33 -1 146757..147089 + 110 113460310 plsX HS_0164 - fatty acid/phospholipid synthesis protein 167 39.22 0 147142..148092 + 316 113460311 fabH HS_0165 - 3-oxoacyl-(acyl carrier protein) synthase III 168 41.11 +1 148136..149074 + 312 113460312 fabD HS_0166 - [Acyl-carrier-protein] S-malonyltransferase 169 39.94 0 149128..149853 + 241 113460313 fabG HS_0167 - 3-ketoacyl-(acyl-carrier-protein) reductase 170 30.74 -1 150107..150337 + 76 113460314 acpP HS_0168 - acyl carrier protein 171 39.86 0 150486..150914 + 142 113460315 rplK HS_0169 - 50S ribosomal protein L11 172 39.42 0 150919..151608 + 229 113460316 rplA HS_0170 - 50S ribosomal protein L1 173 42.28 +1 151892..152383 + 163 113460317 rplJ HS_0171 - 50S ribosomal protein L10 174 39.57 0 152435..152803 + 122 113460318 rplL HS_0172 - 50S ribosomal protein L7/L12 175 39.00 0 153043..154242 - 399 113460319 rho HS_0173 - transcription termination factor Rho 176 36.67 0 154500..155759 + 419 113460320 rhlB HS_0174 - ATP-dependent RNA helicase RhlB 177 36.97 0 155873..156559 + 228 113460321 rpe HS_0175 - ribulose-phosphate 3-epimerase 178 34.96 0 156556..157230 + 224 113460322 gph HS_0176 - phosphoglycolate phosphatase 179 37.43 0 157240..158241 + 333 113460323 trpS HS_0177 - tryptophanyl-tRNA synthetase 180 31.52 -1 158460..158900 - 146 113460324 - HS_0178 - hypothetical protein 181 37.81 0 158953..159555 + 200 113460325 - HS_0179 - phosphatase 182 25.69 -2 159556..159843 - 95 113460326 - HS_0180 - hypothetical protein 183 38.17 0 159934..162681 - 915 113460327 - HS_0181 - TonB-dependent outer membrane receptor 184 38.51 0 162913..163530 - 205 113460328 - HS_0182 - hypothetical protein 185 38.74 0 163772..165307 + 511 113460329 ilvA HS_0183 - threonine dehydratase 186 40.30 0 165383..166315 - 310 113460330 ispH HS_0184 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 187 33.53 -1 166327..166824 - 165 113460331 lspA HS_0185 - lipoprotein signal peptidase 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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