version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1252 36.74 0 1426702..1427406 - 234 113461388 pepE HS_1245 - peptidase E 1253 39.88 0 1427713..1428369 + 218 113461389 - HS_1246 - hypothetical protein 1254 41.90 +1 1428263..1430725 + 820 113461390 - HS_1247 - autotransporter protein YapE 1255 38.39 0 1430933..1431940 - 335 113461391 fbp HS_1248 - fructose-1,6-bisphosphatase 1256 40.09 0 1432081..1433457 + 458 113461392 mpl HS_1249 - UDP-N-acetylmuramate:L-alanyl-gamma-d-glutamayl-medo-diaminopimelate 1257 36.43 0 1433554..1434069 - 171 113461393 mtlR HS_1250 - mannitol repressor protein 1258 40.02 0 1434151..1435302 - 383 113461394 mtlD HS_1251 - mannitol-1-phosphate 5-dehydrogenase 1259 41.11 +1 1435375..1437252 - 625 113461395 mtlA HS_1252 - mannitol-specific IIABC component, PTS system 1260 45.54 +2 1437618..1438526 + 302 113461396 - HS_1253 - fructokinase 1261 38.83 0 1438800..1439891 + 363 161486691 mltA HS_1254 - murein transglycosylase A 1262 37.24 0 1439891..1440658 + 255 113461398 - HS_1255 - hypothetical protein 1263 36.73 0 1440751..1441869 + 372 113461399 znuA HS_1256 - high-affinity zinc transporter periplasmic component 1264 37.83 0 1442591..1443502 + 303 113461400 cdd HS_1257 - cytidine deaminase 1265 40.99 +1 1443533..1444342 + 269 113461401 truA HS_1258 - tRNA pseudouridine synthase A 1266 44.01 +1 1444398..1447244 - 948 113461402 valS HS_1259 - valyl-tRNA synthetase 1267 28.33 -2 1447281..1448399 - 372 113461403 - HS_1260 - hypothetical protein 1268 41.54 +1 1448680..1448874 - 64 113461404 - HS_1261 - hypothetical protein 1269 36.00 0 1448876..1449625 - 249 113461405 - HS_1262 - hypothetical protein 1270 35.31 0 1449789..1450244 - 151 113461406 - HS_1263 - hypothetical protein 1271 38.51 0 1450266..1450709 - 147 113461407 holC HS_1264 - DNA polymerase III subunit chi 1272 37.14 0 1450879..1451508 - 209 113461408 ompW HS_1265 - outer membrane protein precursor 1273 33.06 -1 1451784..1452524 + 246 113461409 - HS_1266 - hypothetical protein 1274 32.59 -1 1452524..1453063 + 179 113461410 ispZ HS_1267 - intracellular septation protein A 1275 40.22 0 1453073..1453537 + 154 113461411 yciA HS_1268 - acyl-CoA hydrolase 1276 35.69 0 1453560..1453856 + 98 113461412 - HS_1269 - YciI-like protein 1277 40.43 0 1454031..1456637 + 868 113461413 acnB HS_1270 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1278 40.01 0 1456960..1458546 + 528 113461414 - HS_1271 - ABC transporter, periplasmic binding protein 1279 39.83 0 1458684..1459637 + 317 113461415 - HS_1272 - ABC transporter, permease component 1280 38.40 0 1459637..1461589 + 650 113461416 - HS_1273 - ABC transporter, ATP-binding/permease 1281 39.37 0 1461605..1462399 + 264 113461417 - HS_1274 - ABC transporter, ATP-binding protein 1282 34.53 0 1462480..1464066 + 528 113461418 - HS_1275 - FAD flavoprotein oxidase 1283 39.51 0 1464120..1465091 - 323 113461419 lysS HS_1276 - lysyl-tRNA synthetase 1284 43.06 +1 1465404..1467203 + 599 113461420 frdA HS_1277 - fumarate reductase flavoprotein subunit 1285 39.17 0 1467196..1467966 + 256 113461421 frdB HS_1278 - fumarate reductase iron-sulfur subunit 1286 34.81 0 1467977..1468381 + 134 113461422 frdC HS_1279 - fumarate reductase subunit C 1287 35.92 0 1468392..1468739 + 115 113461423 frdD HS_1280 - fumarate reductase subunit D 1288 29.63 -2 1468858..1469667 - 269 113461424 - HS_1281 - permease 1289 40.04 0 1469974..1471449 - 491 113461425 - HS_1282 - major facilitator superfamily permease 1290 40.27 0 1471627..1472520 - 297 113461426 xerD HS_1283 - site-specific tyrosine recombinase XerD 1291 39.75 0 1472517..1473716 - 399 113461427 hcaT HS_1284 - putative 3-phenylpropionic acid transporter 1292 40.07 0 1473717..1474532 - 271 113461428 proC HS_1285 - pyrroline-5-carboxylate reductase 1293 37.31 0 1474595..1475500 + 301 113461429 rdgC HS_1286 - recombination associated protein 1294 37.47 0 1475568..1476776 - 402 113461430 oapA HS_1287 - opacity associated protein A 1295 35.40 0 1476826..1477839 - 337 113461431 - HS_1288 - L-lysine 2,3-aminomutase 1296 40.39 0 1477875..1478441 + 188 113461432 efp HS_1289 - elongation factor P 1297 38.92 0 1478488..1479417 - 309 113461433 dusC HS_1290 - tRNA-dihydrouridine synthase C 1298 38.28 0 1479422..1480291 - 289 113461434 djlA HS_1291 - DNA-J like membrane chaperone protein 1299 42.68 +1 1480384..1481100 - 238 113461435 rph HS_1292 - ribonuclease PH 1300 39.00 0 1481221..1482084 + 287 113461436 - HS_1293 - hypothetical protein 1301 35.01 0 1482093..1482926 + 277 113461437 - HS_1294 - aminomethyl transferase 1302 40.42 0 1482970..1484295 - 441 113461438 srmB HS_1295 - ATP-dependent RNA helicase SrmB 1303 35.86 0 1484389..1485099 + 236 113461439 - HS_1296 - SAM-dependent methyltransferase 1304 38.17 0 1485116..1485694 - 192 113461440 - HS_1297 - acyl-phosphate glycerol-3-phosphate acyltransferase 1305 35.50 0 1485793..1486161 + 122 113461441 folB HS_1298 - dihydroneopterin aldolase 1306 37.10 0 1486210..1487085 - 291 113461442 xerC HS_1299 - site-specific tyrosine recombinase XerC 1307 38.98 0 1487393..1488277 + 294 113461443 psd HS_1300 - phosphatidylserine decarboxylase 1308 39.18 0 1488304..1488936 + 210 113461444 fklB HS_1301 - FKBP-type peptidyl-prolyl cis-trans isomerase 1309 37.66 0 1489174..1491093 + 639 113461445 - HS_1302 - ABC transporter, ATP-binding protein 1310 39.70 0 1491217..1492284 + 355 113461446 recA HS_1303 - recombinase A 1311 34.41 0 1492393..1492857 + 154 113461447 recX HS_1304 - recombination regulator RecX 1312 39.39 0 1492960..1494675 + 571 113461448 proS HS_1305 - prolyl-tRNA synthetase 1313 44.40 +2 1494813..1496891 + 692 113461449 frpB HS_1306 - iron-regulated outer membrane protein 1314 37.63 0 1497083..1498270 + 395 113461450 tyrS HS_1307 - tyrosyl-tRNA synthetase 1315 40.43 0 1498316..1498921 - 201 113461451 recR HS_1308 - recombination protein RecR 1316 40.00 0 1498984..1499313 - 109 113461452 - HS_1309 - hypothetical protein 1317 37.81 0 1499439..1501337 + 632 113461453 topB HS_1310 - DNA topoisomerase III 1318 39.13 0 1501475..1501819 + 114 113461454 secG HS_1311 - preprotein translocase subunit SecG 1319 36.62 0 1502393..1503334 - 313 113461455 secF HS_1312 - preprotein translocase subunit SecF 1320 37.44 0 1503374..1505224 - 616 113461456 secD HS_1313 - preprotein translocase subunit SecD 1321 33.70 -1 1505256..1505525 - 89 113461457 yajC HS_1314 - preprotein translocase subunit YajC 1322 38.64 0 1505711..1506841 - 376 113461458 tgt HS_1315 - queuine tRNA-ribosyltransferase 1323 39.68 0 1506892..1507962 - 356 113461459 queA HS_1316 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1324 36.49 0 1508094..1509362 - 422 113461460 dctM HS_1317 - C4-dicarboxylate transport system, large subunit (permease) 1325 31.13 -1 1509380..1509832 - 150 113461461 dctQ HS_1318 - C4-dicarboxylate transport system, small subunit 1326 32.59 -1 1509829..1510899 - 356 113461462 dctP HS_1319 - C4-dicarboxylate transport system, C4-dicarboxylate-binding protein 1327 39.51 0 1511236..1511850 - 204 113461463 - HS_1320 - hypothetical protein 1328 35.16 0 1512130..1512402 + 90 113461464 - HS_1321 - hypothetical protein 1329 29.10 -2 1512411..1512599 + 62 113461465 - HS_1322 - hypothetical protein 1330 37.18 0 1512910..1514286 - 458 113461466 prtC HS_1323 - collagenase prtC 1331 34.07 0 1514428..1515237 - 269 113461467 ligA HS_1324 - DNA ligase 1332 38.93 0 1515405..1516940 - 511 113461468 engA HS_1325 - GTP-binding protein EngA 1333 35.58 0 1517071..1517604 - 177 113461469 - HS_1326 - hypothetical protein 1334 37.47 0 1517751..1519103 + 450 113461470 pmbA HS_1327 - antibiotic maturation factor 1335 39.11 0 1519169..1520467 - 432 113461471 purA HS_1328 - adenylosuccinate synthetase 1336 38.10 0 1520967..1521995 + 342 113461472 kdgK HS_1329 - 2-keto-3-deoxygluconate kinase 1337 37.13 0 1522017..1523807 + 596 113461473 uidA HS_1330 - beta-D-glucuronidase 1338 38.69 0 1525271..1525699 - 142 113461474 - HS_1331 - hypothetical protein 1339 28.89 -2 1525748..1525927 - 59 113461475 - HS_1332 - hypothetical protein 1340 36.64 0 1525943..1526275 - 110 113461476 - HS_1333 - hypothetical protein 1341 34.59 0 1526268..1526666 - 132 113461477 - HS_1334 - terminase small subunit 1342 40.58 0 1526741..1526947 - 68 113461478 - HS_1335 - prophage CP4-57 regulatory protein 1343 27.49 -2 1527311..1528012 - 233 113461479 - HS_1336 - hypothetical protein 1344 39.14 0 1528094..1529350 - 418 113461480 int HS_1337 - integrase 1345 37.22 0 1530177..1530716 - 179 113461481 - HS_1338 - hypothetical protein 1346 41.04 +1 1531121..1532470 + 449 113461482 gdhA HS_1339 - glutamate dehydrogenase 1347 36.23 0 1532664..1533491 + 275 113461483 - HS_1340 - hypothetical protein 1348 38.44 0 1533632..1534258 + 208 113461484 upp HS_1341 - uracil phosphoribosyltransferase 1349 40.98 +1 1534360..1535601 + 413 113461485 uraA HS_1342 - uracil permease 1350 30.89 -1 1535688..1536383 + 231 113461486 - HS_1343 - DNA replication initiation factor 1351 34.88 0 1536501..1536824 - 107 113461487 trxA HS_1344 - thioredoxin 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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