version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1107 33.51 -1 1233784..1234338 + 184 113461243 orn HS_1100 - oligoribonuclease 1108 40.57 0 1235376..1236674 - 432 113461244 amtB HS_1101 - ammonium transporter 1109 39.50 0 1237162..1238556 - 464 113461245 fumC HS_1102 - fumarate hydratase 1110 36.73 0 1238763..1239704 + 313 113461246 tyrR HS_1103 - transcriptional regulatory protein 1111 35.51 0 1239721..1241097 - 458 113461247 hflX HS_1104 - GTP-binding protein HflX 1112 35.05 0 1241100..1241390 - 96 113461248 hfq HS_1105 - RNA-binding protein Hfq 1113 39.61 0 1241597..1242967 - 456 113461249 gor HS_1106 - glutathione reductase 1114 38.42 0 1243057..1243902 - 281 113461250 - HS_1107 - hypothetical protein 1115 38.72 0 1243962..1246502 - 846 113461251 ponA HS_1108 - penicillin-binding protein 1A 1116 33.33 -1 1246627..1247412 + 261 113461252 comA HS_1109 - competence protein A 1117 26.85 -2 1247416..1247955 + 179 113461253 comB HS_1110 - competence protein B 1118 28.11 -2 1247959..1248456 + 165 113461254 comC HS_1111 - competence protein C 1119 34.22 0 1248472..1249605 + 377 113461255 comE HS_1112 - competence protein E 1120 37.40 0 1249823..1250314 + 163 113461256 aroK HS_1113 - shikimate kinase 1121 38.02 0 1250334..1251422 + 362 113461257 aroB HS_1114 - 3-dehydroquinate synthase 1122 33.09 -1 1251459..1252292 + 277 113461258 dam HS_1115 - DNA adenine methylase Dam 1123 37.31 0 1252323..1252976 - 217 113461259 tpn HS_1116 - transposase 1124 37.61 0 1253061..1253972 - 303 113461260 galU HS_1117 - UDP-glucose pyrophosphorylase 1125 38.32 0 1254022..1255386 - 454 113461261 manB HS_1118 - phosphomannomutase 1126 31.72 -1 1255499..1255684 - 61 113461262 - HS_1119 - hypothetical protein 1127 39.47 0 1255786..1258410 - 874 113461263 alaS HS_1120 - alanyl-tRNA synthetase 1128 33.80 0 1258602..1259027 - 141 113461264 uspA HS_1121 - universal stress protein A 1129 33.33 -1 1259016..1260005 + 329 113461265 mazG HS_1122 - nucleoside triphosphate pyrophosphohydrolase 1130 38.21 0 1260010..1262202 + 730 113461266 priA HS_1123 - primosome assembly protein PriA 1131 36.59 0 1262274..1262948 + 224 113461267 - HS_1124 - cell division protein FtsN 1132 30.06 -2 1262974..1263462 - 162 113461268 mreD HS_1125 - rod shape-determining protein MreD 1133 36.08 0 1263462..1264517 - 351 113461269 mreC HS_1126 - rod shape-determining protein MreC 1134 40.72 +1 1264599..1265654 - 351 113461270 mreB HS_1127 - rod shape-determining protein MreB 1135 39.44 0 1265826..1268657 - 943 113461271 uvrA HS_1128 - excinuclease ABC subunit A 1136 41.94 +1 1268836..1269300 + 154 113461272 ssb HS_1129 - single-strand DNA-binding protein 1137 37.51 0 1269387..1270271 - 294 113461273 metF HS_1130 - 5,10-methylenetetrahydrofolate reductase 1138 31.98 -1 1270487..1271005 - 172 113461274 - HS_1131 - hypothetical protein 1139 40.06 0 1271025..1272080 - 351 113461275 nagZ HS_1132 - beta-hexosaminidase 1140 34.45 0 1272087..1272443 - 118 113461276 - HS_1133 - hypothetical protein 1141 36.75 0 1272443..1272793 - 116 113461277 - HS_1134 - HIT-like protein 1142 38.53 0 1273061..1273888 + 275 113461278 focA HS_1135 - formate transporter 1143 39.40 0 1273983..1276307 + 774 113461279 pflB HS_1136 - formate acetyltransferase 1144 36.17 0 1276442..1276900 + 152 113461280 - HS_1137 - hypothetical protein 1145 36.78 0 1277023..1278126 + 367 113461281 - HS_1138 - hypothetical protein 1146 34.33 0 1278111..1278815 + 234 113461282 - HS_1139 - hypothetical protein 1147 39.52 0 1279077..1279868 - 263 113461283 gatR HS_1140 - galactitol utilization operon repressor 1148 38.03 0 1279962..1281005 - 347 113461284 gatD HS_1141 - galactitol-1-phosphate dehydrogenase 1149 40.99 +1 1281019..1282377 - 452 113461285 gatC HS_1142 - PTS system, galactitol-specific IIC component 1150 35.44 0 1282382..1282666 - 94 113461286 gatB HS_1143 - galactitol-specific PTS system component IIB 1151 35.12 0 1282690..1283136 - 148 113461287 gatA HS_1144 - galactitol-specific PTS system component IIA 1152 37.99 0 1283149..1284414 - 421 113461288 gatZ HS_1145 - tagatose-bisphosphate aldolase noncatalytic subunit 1153 37.21 0 1284428..1285381 - 317 113461289 lacD HS_1146 - tagatose 1,6-diphosphate aldolase 1154 37.38 0 1285647..1286387 + 246 113461290 pflA HS_1147 - pyruvate formate lyase-activating enzyme 1 1155 41.30 +1 1286516..1287469 + 317 113461291 trxB HS_1148 - thioredoxin reductase 1156 36.85 0 1287535..1289298 + 587 113461292 cydD HS_1149 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1157 37.55 0 1289298..1291028 + 576 161486692 cydC HS_1150 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1158 43.57 +1 1291133..1291474 + 113 113461294 - HS_1151 - hypothetical protein 1159 38.26 0 1291766..1292638 + 290 113461295 - HS_1152 - hypothetical protein 1160 38.27 0 1292729..1293295 + 188 113461296 pgsA HS_1153 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1161 36.65 0 1293755..1304419 + 3554 113461297 - HS_1154 - large adhesin 1162 39.86 0 1304541..1305965 - 474 113461298 - HS_1155 - hypothetical protein 1163 37.62 0 1306116..1307282 + 388 113461299 ubiF HS_1156 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1164 37.53 0 1307441..1308559 + 372 113461300 potA HS_1157 - putrescine/spermidine ABC transporter ATPase protein 1165 33.91 0 1308543..1309403 + 286 113461301 potB HS_1158 - spermidine/putrescine ABC transporter membrane protein 1166 37.11 0 1309403..1310170 + 255 113461302 potC HS_1159 - spermidine/putrescine ABC transporter membrane protein 1167 37.85 0 1310334..1311419 + 361 113461303 potD HS_1160 - spermidine/putrescine-binding periplasmic protein 1168 37.70 0 1311475..1314906 - 1143 113461304 mfd HS_1161 - transcription-repair coupling factor 1169 36.82 0 1314912..1315628 - 238 113461305 ubiG HS_1162 - 3-demethylubiquinone-9 3-methyltransferase 1170 39.76 0 1315768..1318413 + 881 113461306 gyrA HS_1163 - DNA gyrase subunit A 1171 33.33 -1 1318464..1318655 + 63 113461307 - HS_1164 - hypothetical protein 1172 31.50 -1 1318777..1319103 + 108 113461308 phnA HS_1165 - alkylphosphonate uptake protein 1173 39.57 0 1319140..1320357 + 405 113461309 tyrP HS_1166 - tyrosine-specific transport protein 1174 38.27 0 1320468..1321742 - 424 113461310 murZ HS_1167 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1175 35.32 0 1321762..1322013 - 83 113461311 - HS_1168 - morphology/transcription regulator BolA family protein 1176 36.04 0 1322026..1322358 - 110 113461312 - HS_1169 - hypothetical protein 1177 34.61 0 1322362..1322988 - 208 113461313 - HS_1170 - hypothetical protein 1178 34.91 0 1323024..1323530 - 168 113461314 - HS_1171 - hypothetical protein 1179 40.71 +1 1323562..1324347 - 261 113461315 - HS_1172 - ABC transporter permease 1180 39.62 0 1324344..1325138 - 264 113461316 - HS_1173 - ABC transporter, ATP-binding protein 1181 32.69 -1 1325313..1325933 + 206 113461317 - HS_1174 - hypothetical protein 1182 34.10 0 1325914..1326432 + 172 113461318 - HS_1175 - hypothetical protein 1183 37.88 0 1326447..1327172 + 241 113461319 - HS_1176 - ABC transporter, ATP-binding protein 1184 36.19 0 1327175..1327735 + 186 113461320 ptsN HS_1177 - nitrogen regulatory IIA protein 1185 35.08 0 1327738..1328598 + 286 113461321 - HS_1178 - hypothetical protein 1186 36.89 0 1328634..1330685 - 683 113461322 metG HS_1179 - methionyl-tRNA synthetase 1187 38.86 0 1330827..1331948 + 373 113461323 mrp HS_1180 - putative ATPase 1188 39.80 0 1331963..1332673 - 236 113461324 modB HS_1181 - molybdate ABC transporter permease protein 1189 39.22 0 1332691..1333455 - 254 113461325 modA HS_1182 - molybdenum ABC transporter, periplasmic binding protein 1190 37.20 0 1333477..1334175 - 232 113461326 - HS_1183 - permease 1191 34.60 0 1334333..1335121 + 262 113461327 - HS_1184 - hypothetical protein 1192 41.25 +1 1335892..1336611 + 239 113461328 - HS_1185 - hypothetical protein 1193 37.65 0 1336965..1339676 - 903 113461329 ftsK HS_1186 - DNA translocase FtsK 1194 36.27 0 1339678..1340154 - 158 113461330 lrp HS_1187 - leucine-responsive transcriptional regulator 1195 42.70 +1 1340256..1341632 - 458 113461331 radA HS_1188 - DNA repair protein RadA 1196 34.87 0 1341642..1342685 - 347 113461332 - HS_1189 - hypothetical protein 1197 38.47 0 1342828..1343508 + 226 113461333 - HS_1190 - phosphate transport regulator 1198 39.51 0 1343535..1344797 + 420 113461334 - HS_1191 - phosphate permease 1199 35.10 0 1344722..1345513 + 263 113461335 - HS_1192 - hypothetical protein 1200 37.88 0 1345518..1346771 + 417 113461336 cca HS_1193 - tRNA nucleotidyltransferase 1201 40.41 0 1346950..1348857 + 635 113461337 dnaK HS_1194 - chaperone protein dnaK, heat shock protein 70 1202 40.02 0 1348955..1350076 + 373 113461338 dnaJ HS_1195 - chaperone protein dnaJ 1203 38.22 0 1350360..1352630 + 756 113461339 nrdA HS_1196 - ribonucleotide-diphosphate reductase subunit alpha 1204 34.07 0 1352713..1353252 - 179 113461340 pilF HS_1197 - fimbrial biogenesis and twitching motility protein 1205 36.89 0 1353283..1354380 - 365 113461341 - HS_1198 - hypothetical protein 1206 30.77 -1 1354473..1354667 + 64 113461342 - HS_1199 - hypothetical protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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