version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1085 37.04 0 1195690..1196661 + 323 113461221 - HS_1078 - sodium/calcium exchange protein 1086 35.81 0 1196682..1197689 - 335 113461222 - HS_1079 - permease 1087 31.46 -1 1197680..1198321 - 213 113461223 - HS_1080 - hypothetical protein 1088 33.12 -1 1198553..1199023 + 156 113461224 - HS_1081 - ATPase 1089 36.74 0 1199027..1200229 + 400 113461225 amiB HS_1082 - N-acetylmuramoyl-L-alanine amidase 1090 37.88 0 1200245..1202092 + 615 113461226 mutL HS_1083 - DNA mismatch repair protein 1091 38.68 0 1202089..1203024 + 311 113461227 miaA HS_1084 - tRNA delta(2)-isopentenylpyrophosphate transferase 1092 38.34 0 1203500..1214713 + 3737 113461228 - HS_1085 - large adhesin 1093 37.50 0 1214992..1216431 + 479 113461229 pykA HS_1086 - pyruvate kinase 1094 33.93 0 1216722..1218578 + 618 113461230 ppiD HS_1087 - peptidyl-prolyl cis-trans isomerase D 1095 38.89 0 1218833..1219552 + 239 113461231 rpsB HS_1088 - 30S ribosomal protein S2 1096 38.50 0 1219675..1220526 + 283 113461232 tsf HS_1089 - elongation factor Ts 1097 35.51 0 1220700..1221020 - 106 113461233 trpR HS_1090 - Trp operon repressor 1098 35.51 0 1221334..1222575 - 413 113461234 - HS_1091 - serine/threonine transporter SstT 1099 29.61 -2 1222834..1223289 + 151 113461235 impA HS_1092 - ImpA protein 1100 39.37 0 1223377..1224801 - 474 113461236 lpdA HS_1093 - dihydrolipoamide dehydrogenase 1101 40.78 +1 1224888..1226645 - 585 113461237 aceF HS_1094 - pyruvate dehydrogenase, E2 complex 1102 37.88 0 1226829..1229492 - 887 113461238 aceE HS_1095 - pyruvate dehydrogenase subunit E1 1103 35.53 0 1229787..1230287 - 166 113461239 crr HS_1096 - glucose-specific PTS system component 1104 36.69 0 1230350..1232077 - 575 113461240 ptsI HS_1097 - phosphoenolpyruvate-protein phosphotransferase 1105 37.98 0 1232182..1232439 - 85 113461241 ptsH HS_1098 - phosphocarrier protein HPr 1106 36.94 0 1232662..1233714 - 350 113461242 engC HS_1099 - ribosome-associated GTPase 1107 33.51 -1 1233784..1234338 + 184 113461243 orn HS_1100 - oligoribonuclease 1108 40.57 0 1235376..1236674 - 432 113461244 amtB HS_1101 - ammonium transporter 1109 39.50 0 1237162..1238556 - 464 113461245 fumC HS_1102 - fumarate hydratase 1110 36.73 0 1238763..1239704 + 313 113461246 tyrR HS_1103 - transcriptional regulatory protein 1111 35.51 0 1239721..1241097 - 458 113461247 hflX HS_1104 - GTP-binding protein HflX 1112 35.05 0 1241100..1241390 - 96 113461248 hfq HS_1105 - RNA-binding protein Hfq 1113 39.61 0 1241597..1242967 - 456 113461249 gor HS_1106 - glutathione reductase 1114 38.42 0 1243057..1243902 - 281 113461250 - HS_1107 - hypothetical protein 1115 38.72 0 1243962..1246502 - 846 113461251 ponA HS_1108 - penicillin-binding protein 1A 1116 33.33 -1 1246627..1247412 + 261 113461252 comA HS_1109 - competence protein A 1117 26.85 -2 1247416..1247955 + 179 113461253 comB HS_1110 - competence protein B 1118 28.11 -2 1247959..1248456 + 165 113461254 comC HS_1111 - competence protein C 1119 34.22 0 1248472..1249605 + 377 113461255 comE HS_1112 - competence protein E 1120 37.40 0 1249823..1250314 + 163 113461256 aroK HS_1113 - shikimate kinase 1121 38.02 0 1250334..1251422 + 362 113461257 aroB HS_1114 - 3-dehydroquinate synthase 1122 33.09 -1 1251459..1252292 + 277 113461258 dam HS_1115 - DNA adenine methylase Dam 1123 37.31 0 1252323..1252976 - 217 113461259 tpn HS_1116 - transposase 1124 37.61 0 1253061..1253972 - 303 113461260 galU HS_1117 - UDP-glucose pyrophosphorylase 1125 38.32 0 1254022..1255386 - 454 113461261 manB HS_1118 - phosphomannomutase 1126 31.72 -1 1255499..1255684 - 61 113461262 - HS_1119 - hypothetical protein 1127 39.47 0 1255786..1258410 - 874 113461263 alaS HS_1120 - alanyl-tRNA synthetase 1128 33.80 0 1258602..1259027 - 141 113461264 uspA HS_1121 - universal stress protein A 1129 33.33 -1 1259016..1260005 + 329 113461265 mazG HS_1122 - nucleoside triphosphate pyrophosphohydrolase 1130 38.21 0 1260010..1262202 + 730 113461266 priA HS_1123 - primosome assembly protein PriA 1131 36.59 0 1262274..1262948 + 224 113461267 - HS_1124 - cell division protein FtsN 1132 30.06 -2 1262974..1263462 - 162 113461268 mreD HS_1125 - rod shape-determining protein MreD 1133 36.08 0 1263462..1264517 - 351 113461269 mreC HS_1126 - rod shape-determining protein MreC 1134 40.72 +1 1264599..1265654 - 351 113461270 mreB HS_1127 - rod shape-determining protein MreB 1135 39.44 0 1265826..1268657 - 943 113461271 uvrA HS_1128 - excinuclease ABC subunit A 1136 41.94 +1 1268836..1269300 + 154 113461272 ssb HS_1129 - single-strand DNA-binding protein 1137 37.51 0 1269387..1270271 - 294 113461273 metF HS_1130 - 5,10-methylenetetrahydrofolate reductase 1138 31.98 -1 1270487..1271005 - 172 113461274 - HS_1131 - hypothetical protein 1139 40.06 0 1271025..1272080 - 351 113461275 nagZ HS_1132 - beta-hexosaminidase 1140 34.45 0 1272087..1272443 - 118 113461276 - HS_1133 - hypothetical protein 1141 36.75 0 1272443..1272793 - 116 113461277 - HS_1134 - HIT-like protein 1142 38.53 0 1273061..1273888 + 275 113461278 focA HS_1135 - formate transporter 1143 39.40 0 1273983..1276307 + 774 113461279 pflB HS_1136 - formate acetyltransferase 1144 36.17 0 1276442..1276900 + 152 113461280 - HS_1137 - hypothetical protein 1145 36.78 0 1277023..1278126 + 367 113461281 - HS_1138 - hypothetical protein 1146 34.33 0 1278111..1278815 + 234 113461282 - HS_1139 - hypothetical protein 1147 39.52 0 1279077..1279868 - 263 113461283 gatR HS_1140 - galactitol utilization operon repressor 1148 38.03 0 1279962..1281005 - 347 113461284 gatD HS_1141 - galactitol-1-phosphate dehydrogenase 1149 40.99 +1 1281019..1282377 - 452 113461285 gatC HS_1142 - PTS system, galactitol-specific IIC component 1150 35.44 0 1282382..1282666 - 94 113461286 gatB HS_1143 - galactitol-specific PTS system component IIB 1151 35.12 0 1282690..1283136 - 148 113461287 gatA HS_1144 - galactitol-specific PTS system component IIA 1152 37.99 0 1283149..1284414 - 421 113461288 gatZ HS_1145 - tagatose-bisphosphate aldolase noncatalytic subunit 1153 37.21 0 1284428..1285381 - 317 113461289 lacD HS_1146 - tagatose 1,6-diphosphate aldolase 1154 37.38 0 1285647..1286387 + 246 113461290 pflA HS_1147 - pyruvate formate lyase-activating enzyme 1 1155 41.30 +1 1286516..1287469 + 317 113461291 trxB HS_1148 - thioredoxin reductase 1156 36.85 0 1287535..1289298 + 587 113461292 cydD HS_1149 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1157 37.55 0 1289298..1291028 + 576 161486692 cydC HS_1150 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1158 43.57 +1 1291133..1291474 + 113 113461294 - HS_1151 - hypothetical protein 1159 38.26 0 1291766..1292638 + 290 113461295 - HS_1152 - hypothetical protein 1160 38.27 0 1292729..1293295 + 188 113461296 pgsA HS_1153 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1161 36.65 0 1293755..1304419 + 3554 113461297 - HS_1154 - large adhesin 1162 39.86 0 1304541..1305965 - 474 113461298 - HS_1155 - hypothetical protein 1163 37.62 0 1306116..1307282 + 388 113461299 ubiF HS_1156 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1164 37.53 0 1307441..1308559 + 372 113461300 potA HS_1157 - putrescine/spermidine ABC transporter ATPase protein 1165 33.91 0 1308543..1309403 + 286 113461301 potB HS_1158 - spermidine/putrescine ABC transporter membrane protein 1166 37.11 0 1309403..1310170 + 255 113461302 potC HS_1159 - spermidine/putrescine ABC transporter membrane protein 1167 37.85 0 1310334..1311419 + 361 113461303 potD HS_1160 - spermidine/putrescine-binding periplasmic protein 1168 37.70 0 1311475..1314906 - 1143 113461304 mfd HS_1161 - transcription-repair coupling factor 1169 36.82 0 1314912..1315628 - 238 113461305 ubiG HS_1162 - 3-demethylubiquinone-9 3-methyltransferase 1170 39.76 0 1315768..1318413 + 881 113461306 gyrA HS_1163 - DNA gyrase subunit A 1171 33.33 -1 1318464..1318655 + 63 113461307 - HS_1164 - hypothetical protein 1172 31.50 -1 1318777..1319103 + 108 113461308 phnA HS_1165 - alkylphosphonate uptake protein 1173 39.57 0 1319140..1320357 + 405 113461309 tyrP HS_1166 - tyrosine-specific transport protein 1174 38.27 0 1320468..1321742 - 424 113461310 murZ HS_1167 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1175 35.32 0 1321762..1322013 - 83 113461311 - HS_1168 - morphology/transcription regulator BolA family protein 1176 36.04 0 1322026..1322358 - 110 113461312 - HS_1169 - hypothetical protein 1177 34.61 0 1322362..1322988 - 208 113461313 - HS_1170 - hypothetical protein 1178 34.91 0 1323024..1323530 - 168 113461314 - HS_1171 - hypothetical protein 1179 40.71 +1 1323562..1324347 - 261 113461315 - HS_1172 - ABC transporter permease 1180 39.62 0 1324344..1325138 - 264 113461316 - HS_1173 - ABC transporter, ATP-binding protein 1181 32.69 -1 1325313..1325933 + 206 113461317 - HS_1174 - hypothetical protein 1182 34.10 0 1325914..1326432 + 172 113461318 - HS_1175 - hypothetical protein 1183 37.88 0 1326447..1327172 + 241 113461319 - HS_1176 - ABC transporter, ATP-binding protein 1184 36.19 0 1327175..1327735 + 186 113461320 ptsN HS_1177 - nitrogen regulatory IIA protein 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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