version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1018 34.63 0 1115127..1116671 - 514 113461155 thiP HS_1012 - thiamine transporter membrane protein 1019 37.17 0 1116733..1117749 - 338 113461156 tbpA HS_1013 - thiamine ABC transporter, periplasmic-binding protein 1020 39.00 0 1118086..1119444 + 452 113461157 - HS_1014 - permease 1021 33.50 -1 1119492..1120085 + 197 113461158 - HS_1015 - hypothetical protein 1022 25.29 -2 1120120..1120293 - 57 113461941 - HS_1015a - hypothetical protein 1023 33.33 -1 1120294..1120884 - 196 113461159 - HS_1016 - RNA polymerase sigma factor 1024 38.99 0 1120952..1121905 + 317 113461160 - HS_1017 - putative sulfite oxidase subunit YedY 1025 34.67 0 1121905..1122504 + 199 113461161 - HS_1018 - putative sulfite oxidase subunit YedZ 1026 35.64 0 1122606..1123907 - 433 113461162 - HS_1019 - permease 1027 35.79 0 1124740..1126896 - 718 113461163 - HS_1020 - 23S rRNA m(2)G2445 methyltransferase 1028 38.14 0 1126942..1128690 - 582 113461164 msbA HS_1021 - lipid transporter ATP-binding/permease protein 1029 34.90 0 1128741..1131167 - 808 113461165 rec2 HS_1022 - recombination protein 2 1030 39.17 0 1131493..1131903 + 136 113461166 dksA HS_1023 - DnaK suppressor protein 1031 38.43 0 1132205..1133578 + 457 113461167 pcnB HS_1024 - poly(A) polymerase 1032 34.80 0 1133575..1134051 + 158 113461168 folK HS_1025 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1033 37.60 0 1134150..1135298 - 382 113461169 nagA HS_1026 - N-acetylglucosamine-6-phosphate deacetylase 1034 34.57 0 1135311..1136117 - 268 113461170 nagB HS_1027 - glucosamine-6-phosphate deaminase 1035 39.96 0 1136349..1136801 - 150 113461171 moaE HS_1028 - molybdopterin synthase subunit MoaE 1036 39.84 0 1136802..1137047 - 81 113461172 moaD HS_1029 - molybdopterin synthase small subunit 1037 40.25 0 1137069..1137545 - 158 113461173 moaC HS_1030 - GTP cyclohydrolase subunit MoaC 1038 35.79 0 1137555..1138571 - 338 113461174 moaA HS_1031 - molybdenum cofactor biosynthesis protein A 1039 37.03 0 1138843..1139844 + 333 113461175 purR HS_1032 - DNA-binding transcriptional repressor PurR 1040 35.80 0 1139894..1140865 - 323 113461176 cysB HS_1033 - transcriptional regulator CysB 1041 36.39 0 1140927..1141253 - 108 113461177 - HS_1034 - glutaredoxin-like protein 1042 39.89 0 1141355..1142422 - 355 113461178 hagA HS_1035 - hemagglutinin antigen 1043 36.96 0 1142526..1143902 - 458 113461179 - HS_1036 - metalloprotease 1044 34.84 0 1144091..1144885 + 264 113461180 znuC HS_1037 - high-affinity zinc uptake system, ATP-binding protein 1045 34.73 0 1144895..1145680 + 261 113461181 znuB HS_1038 - high-affinity zinc uptake system, membrane protein 1046 37.92 0 1145754..1147193 - 479 113461182 - HS_1039 - amino acid carrier protein 1047 21.92 -2 1147178..1147396 - 72 113461183 - HS_1040 - hypothetical protein 1048 39.98 0 1147365..1148282 - 305 113461184 - HS_1041 - N-acetyl-D-glucosamine kinase 1049 34.01 0 1148318..1149055 - 245 113461185 pgpB HS_1042 - phosphatidylglycerophosphatase 1050 38.86 0 1149148..1149798 + 216 113461186 ribA HS_1043 - GTP cyclohydrolase II 1051 36.21 0 1149951..1153046 + 1031 113461187 - HS_1044 - hypothetical protein 1052 39.24 0 1153063..1153485 + 140 113461188 - HS_1045 - hypothetical protein 1053 36.82 0 1153580..1154095 + 171 113461189 - HS_1046 - permease 1054 37.67 0 1153936..1155066 + 376 113461190 hemH HS_1047 - ferrochelatase 1055 36.13 0 1155218..1156255 + 345 113461191 potD HS_1048 - spermidine/putrescine-binding periplasmic protein 1056 35.43 0 1156362..1157408 - 348 113461192 degS HS_1049 - DegS serine peptidase 1057 40.23 0 1157428..1158558 - 376 113461193 ribD HS_1050 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 1058 37.78 0 1158561..1159010 - 149 113461194 - HS_1051 - transcriptional regulator NrdR 1059 37.04 0 1159157..1159453 - 98 113461195 azlD HS_1052 - branched chain amino acid ABC transporter 1060 35.66 0 1159497..1160228 - 243 113461196 azlC HS_1053 - branched chain amino acid ABC transporter 1061 38.40 0 1160236..1161162 - 308 113461197 metR HS_1054 - transcriptional regulator 1062 41.13 +1 1161299..1162234 - 311 113461198 mdh HS_1055 - malate dehydrogenase 1063 36.32 0 1162457..1162924 + 155 113461199 argR HS_1056 - arginine repressor 1064 37.73 0 1162946..1163833 + 295 113461200 - HS_1057 - hypothetical protein 1065 40.69 +1 1163918..1172638 - 2906 113461201 - HS_1058 - large adhesin 1066 37.63 0 1173363..1173944 + 193 113461202 rnfA HS_1059 - Na(+)-translocating NADH-quinone reductase subunit E 1067 39.26 0 1173948..1174538 + 196 113461203 rnfB HS_1060 - electron transport complex protein RnfB 1068 40.76 +1 1174542..1176521 + 659 113461204 rnfC HS_1061 - electron transport complex protein RnfC 1069 38.64 0 1176538..1177629 + 363 113461205 rnfD HS_1062 - electron transport complex protein RnfD 1070 39.90 0 1177626..1178249 + 207 113461206 rnfG HS_1063 - electron transport complex protein RnfG 1071 36.99 0 1178306..1178962 + 218 113461207 rnfE HS_1064 - SoxR-reducing system protein RsxE 1072 35.22 0 1178959..1179594 + 211 113461208 nth HS_1065 - endonuclease III / DNA-(apurinic or apyrimidinic site) lyase 1073 35.53 0 1179629..1180993 + 454 113461209 - HS_1066 - sodium-dependent transporter 1074 30.43 -1 1181208..1181792 + 194 113461210 - HS_1067 - hypothetical protein 1075 35.87 0 1181872..1184517 - 881 113461211 - HS_1068 - hypothetical protein 1076 35.09 0 1184495..1185748 - 417 113461212 - HS_1069 - hypothetical protein 1077 37.26 0 1185960..1186595 + 211 113461213 proQ HS_1070 - putative solute/DNA competence effector 1078 36.29 0 1186675..1188702 + 675 113461214 prc HS_1071 - carboxy-terminal protease 1079 31.09 -1 1188767..1190194 + 475 113461215 - HS_1072 - hypothetical protein 1080 37.94 0 1190271..1190834 + 187 113461216 - HS_1073 - hypothetical protein 1081 33.81 0 1190910..1191542 + 210 113461217 - HS_1074 - glyoxalase II family protein 1082 36.90 0 1191644..1192933 + 429 113461218 serS HS_1075 - seryl-tRNA synthetase 1083 37.06 0 1192980..1194053 - 357 113461219 metX HS_1076 - homoserine O-acetyltransferase 1084 34.91 0 1194241..1194936 + 231 113461220 sanA HS_1077 - SanA protein 1085 37.04 0 1195690..1196661 + 323 113461221 - HS_1078 - sodium/calcium exchange protein 1086 35.81 0 1196682..1197689 - 335 113461222 - HS_1079 - permease 1087 31.46 -1 1197680..1198321 - 213 113461223 - HS_1080 - hypothetical protein 1088 33.12 -1 1198553..1199023 + 156 113461224 - HS_1081 - ATPase 1089 36.74 0 1199027..1200229 + 400 113461225 amiB HS_1082 - N-acetylmuramoyl-L-alanine amidase 1090 37.88 0 1200245..1202092 + 615 113461226 mutL HS_1083 - DNA mismatch repair protein 1091 38.68 0 1202089..1203024 + 311 113461227 miaA HS_1084 - tRNA delta(2)-isopentenylpyrophosphate transferase 1092 38.34 0 1203500..1214713 + 3737 113461228 - HS_1085 - large adhesin 1093 37.50 0 1214992..1216431 + 479 113461229 pykA HS_1086 - pyruvate kinase 1094 33.93 0 1216722..1218578 + 618 113461230 ppiD HS_1087 - peptidyl-prolyl cis-trans isomerase D 1095 38.89 0 1218833..1219552 + 239 113461231 rpsB HS_1088 - 30S ribosomal protein S2 1096 38.50 0 1219675..1220526 + 283 113461232 tsf HS_1089 - elongation factor Ts 1097 35.51 0 1220700..1221020 - 106 113461233 trpR HS_1090 - Trp operon repressor 1098 35.51 0 1221334..1222575 - 413 113461234 - HS_1091 - serine/threonine transporter SstT 1099 29.61 -2 1222834..1223289 + 151 113461235 impA HS_1092 - ImpA protein 1100 39.37 0 1223377..1224801 - 474 113461236 lpdA HS_1093 - dihydrolipoamide dehydrogenase 1101 40.78 +1 1224888..1226645 - 585 113461237 aceF HS_1094 - pyruvate dehydrogenase, E2 complex 1102 37.88 0 1226829..1229492 - 887 113461238 aceE HS_1095 - pyruvate dehydrogenase subunit E1 1103 35.53 0 1229787..1230287 - 166 113461239 crr HS_1096 - glucose-specific PTS system component 1104 36.69 0 1230350..1232077 - 575 113461240 ptsI HS_1097 - phosphoenolpyruvate-protein phosphotransferase 1105 37.98 0 1232182..1232439 - 85 113461241 ptsH HS_1098 - phosphocarrier protein HPr 1106 36.94 0 1232662..1233714 - 350 113461242 engC HS_1099 - ribosome-associated GTPase 1107 33.51 -1 1233784..1234338 + 184 113461243 orn HS_1100 - oligoribonuclease 1108 40.57 0 1235376..1236674 - 432 113461244 amtB HS_1101 - ammonium transporter 1109 39.50 0 1237162..1238556 - 464 113461245 fumC HS_1102 - fumarate hydratase 1110 36.73 0 1238763..1239704 + 313 113461246 tyrR HS_1103 - transcriptional regulatory protein 1111 35.51 0 1239721..1241097 - 458 113461247 hflX HS_1104 - GTP-binding protein HflX 1112 35.05 0 1241100..1241390 - 96 113461248 hfq HS_1105 - RNA-binding protein Hfq 1113 39.61 0 1241597..1242967 - 456 113461249 gor HS_1106 - glutathione reductase 1114 38.42 0 1243057..1243902 - 281 113461250 - HS_1107 - hypothetical protein 1115 38.72 0 1243962..1246502 - 846 113461251 ponA HS_1108 - penicillin-binding protein 1A 1116 33.33 -1 1246627..1247412 + 261 113461252 comA HS_1109 - competence protein A 1117 26.85 -2 1247416..1247955 + 179 113461253 comB HS_1110 - competence protein B 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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