version 1.0
Haemophilus somnus 129PT, complete genome - 1..2007700 1792 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 969 38.22 0 1064682..1065869 - 395 113461106 nhaA HS_0963 - Na+/H+ antiporter 970 38.98 0 1066056..1067402 - 448 113461107 dgt HS_0964 - deoxyguanosinetriphosphate triphosphohydrolase-like protein 971 27.56 -2 1067418..1067642 - 74 113461108 - HS_0965 - hypothetical protein 972 33.69 -1 1067518..1068075 + 185 113461109 - HS_0966 - nuclease 973 40.58 0 1068065..1069264 + 399 113461110 csd HS_0967 - cysteine desulfurase, aminotransferase, class V 974 36.75 0 1069261..1069641 + 126 113461111 - HS_0968 - hypothetical protein 975 40.55 0 1070099..1070389 + 96 113461112 relB HS_0969 - RelB protein 976 40.32 0 1070328..1070642 + 104 113461113 - HS_0970 - hypothetical protein 977 38.38 0 1070718..1071668 - 316 113461114 ompH HS_0971 - ompH family outer membrane protein 978 38.36 0 1071929..1072246 - 105 113461115 yciH HS_0972 - translation initiation factor 1 (eIF-1/SUI1) 979 36.51 0 1072426..1073622 - 398 113461116 - HS_0973 - hypothetical protein 980 28.77 -2 1073632..1073916 - 94 113461117 - HS_0974 - hypothetical protein 981 32.63 -1 1074036..1074320 - 94 113461118 ihfB HS_0975 - integration host factor, beta-subunit 982 38.08 0 1074384..1076027 - 547 113461119 rpsA HS_0976 - 30S ribosomal protein S1 983 40.48 0 1076100..1076813 - 237 113461120 cmkA HS_0977 - cytidylate kinase 984 41.03 +1 1076866..1077891 - 341 113461121 lpxD HS_0978 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 985 36.07 0 1077891..1078475 - 194 113461122 skp HS_0979 - outer membrane protein 986 38.40 0 1078572..1080980 - 802 113461123 - HS_0980 - surface antigen 987 36.79 0 1081049..1082380 - 443 113461124 - HS_0981 - peptidase RseP 988 38.66 0 1082389..1083252 - 287 113461125 cdsA HS_0982 - phosphatidate cytidylyltransferase 989 34.02 0 1083265..1083990 - 241 113461126 uppS HS_0983 - undecaprenyl pyrophosphate synthetase 990 34.32 0 1084172..1084678 - 168 113461127 - HS_0984 - hypothetical protein 991 39.78 0 1084680..1085888 - 402 113461128 dxr HS_0985 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 992 38.53 0 1085959..1086516 - 185 113461129 frr HS_0986 - ribosome recycling factor 993 42.12 +1 1086570..1087286 - 238 113461130 pyrH HS_0987 - uridylate kinase 994 33.98 0 1087385..1087693 - 102 113461131 - HS_0988 - hypothetical protein 995 35.58 0 1087797..1088108 + 103 113461132 - HS_0989 - hypothetical protein 996 38.67 0 1088177..1090873 + 898 113461133 secA HS_0990 - preprotein translocase subunit SecA 997 38.35 0 1090920..1091318 + 132 113461134 mutT HS_0991 - 7,8-dihydro-8-oxoguanine-triphosphatase 998 36.76 0 1091386..1095297 - 1303 113461135 hrpA HS_0992 - ATP-dependent RNA helicase HrpA 999 38.82 0 1095344..1095799 - 151 113461136 - HS_0993 - permease 1000 39.28 0 1096112..1098751 + 879 113461137 ppc HS_0994 - phosphoenolpyruvate carboxylase 1001 35.19 0 1098855..1099178 + 107 113461138 - HS_0995 - dsDNA-mimic protein 1002 41.35 +1 1099335..1100282 - 315 113461139 prs HS_0996 - ribose-phosphate pyrophosphokinase 1003 35.88 0 1100290..1101231 - 313 113461140 ispE HS_0997 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1004 33.49 -1 1101231..1101860 - 209 113461141 lolB HS_0998 - outer membrane lipoprotein LolB 1005 36.67 0 1102038..1102307 + 89 113461142 - HS_0999 - hypothetical protein 1006 36.90 0 1102586..1103062 + 158 113461143 greA HS_1000 - transcription elongation factor GreA 1007 37.04 0 1103118..1103414 - 98 113461144 - HS_1001 - hypothetical protein 1008 36.75 0 1103541..1103891 - 116 113461145 arsC HS_1002 - arsenate reductase 1009 36.47 0 1103977..1105029 + 350 113461146 perM HS_1003 - permease 1010 36.29 0 1105109..1106497 + 462 113461147 - HS_1004 - periplasmic binding transport protein 1011 35.35 0 1106463..1106660 - 65 113461148 - HS_1005 - hypothetical protein 1012 36.75 0 1107112..1108428 + 438 113461149 cadB HS_1006 - lysine/cadaverine antiporter 1013 34.23 0 1108445..1110571 + 708 113461150 cadA HS_1007 - L-lysine decarboxylase 1014 34.61 0 1110793..1112283 + 496 113461151 lysS HS_1008 - lysyl-tRNA synthetase 1015 32.88 -1 1112316..1113203 + 295 113461152 iciA HS_1009 - chromosome replication initiation inhibitor protein 1016 40.96 +1 1113463..1114458 - 331 113461153 bioB HS_1010 - biotin synthase 1017 35.97 0 1114490..1115134 - 214 113461154 thiQ HS_1011 - thiamine ABC transporter, ATP-binding protein 1018 34.63 0 1115127..1116671 - 514 113461155 thiP HS_1012 - thiamine transporter membrane protein 1019 37.17 0 1116733..1117749 - 338 113461156 tbpA HS_1013 - thiamine ABC transporter, periplasmic-binding protein 1020 39.00 0 1118086..1119444 + 452 113461157 - HS_1014 - permease 1021 33.50 -1 1119492..1120085 + 197 113461158 - HS_1015 - hypothetical protein 1022 25.29 -2 1120120..1120293 - 57 113461941 - HS_1015a - hypothetical protein 1023 33.33 -1 1120294..1120884 - 196 113461159 - HS_1016 - RNA polymerase sigma factor 1024 38.99 0 1120952..1121905 + 317 113461160 - HS_1017 - putative sulfite oxidase subunit YedY 1025 34.67 0 1121905..1122504 + 199 113461161 - HS_1018 - putative sulfite oxidase subunit YedZ 1026 35.64 0 1122606..1123907 - 433 113461162 - HS_1019 - permease 1027 35.79 0 1124740..1126896 - 718 113461163 - HS_1020 - 23S rRNA m(2)G2445 methyltransferase 1028 38.14 0 1126942..1128690 - 582 113461164 msbA HS_1021 - lipid transporter ATP-binding/permease protein 1029 34.90 0 1128741..1131167 - 808 113461165 rec2 HS_1022 - recombination protein 2 1030 39.17 0 1131493..1131903 + 136 113461166 dksA HS_1023 - DnaK suppressor protein 1031 38.43 0 1132205..1133578 + 457 113461167 pcnB HS_1024 - poly(A) polymerase 1032 34.80 0 1133575..1134051 + 158 113461168 folK HS_1025 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 1033 37.60 0 1134150..1135298 - 382 113461169 nagA HS_1026 - N-acetylglucosamine-6-phosphate deacetylase 1034 34.57 0 1135311..1136117 - 268 113461170 nagB HS_1027 - glucosamine-6-phosphate deaminase 1035 39.96 0 1136349..1136801 - 150 113461171 moaE HS_1028 - molybdopterin synthase subunit MoaE 1036 39.84 0 1136802..1137047 - 81 113461172 moaD HS_1029 - molybdopterin synthase small subunit 1037 40.25 0 1137069..1137545 - 158 113461173 moaC HS_1030 - GTP cyclohydrolase subunit MoaC 1038 35.79 0 1137555..1138571 - 338 113461174 moaA HS_1031 - molybdenum cofactor biosynthesis protein A 1039 37.03 0 1138843..1139844 + 333 113461175 purR HS_1032 - DNA-binding transcriptional repressor PurR 1040 35.80 0 1139894..1140865 - 323 113461176 cysB HS_1033 - transcriptional regulator CysB 1041 36.39 0 1140927..1141253 - 108 113461177 - HS_1034 - glutaredoxin-like protein 1042 39.89 0 1141355..1142422 - 355 113461178 hagA HS_1035 - hemagglutinin antigen 1043 36.96 0 1142526..1143902 - 458 113461179 - HS_1036 - metalloprotease 1044 34.84 0 1144091..1144885 + 264 113461180 znuC HS_1037 - high-affinity zinc uptake system, ATP-binding protein 1045 34.73 0 1144895..1145680 + 261 113461181 znuB HS_1038 - high-affinity zinc uptake system, membrane protein 1046 37.92 0 1145754..1147193 - 479 113461182 - HS_1039 - amino acid carrier protein 1047 21.92 -2 1147178..1147396 - 72 113461183 - HS_1040 - hypothetical protein 1048 39.98 0 1147365..1148282 - 305 113461184 - HS_1041 - N-acetyl-D-glucosamine kinase 1049 34.01 0 1148318..1149055 - 245 113461185 pgpB HS_1042 - phosphatidylglycerophosphatase 1050 38.86 0 1149148..1149798 + 216 113461186 ribA HS_1043 - GTP cyclohydrolase II 1051 36.21 0 1149951..1153046 + 1031 113461187 - HS_1044 - hypothetical protein 1052 39.24 0 1153063..1153485 + 140 113461188 - HS_1045 - hypothetical protein 1053 36.82 0 1153580..1154095 + 171 113461189 - HS_1046 - permease 1054 37.67 0 1153936..1155066 + 376 113461190 hemH HS_1047 - ferrochelatase 1055 36.13 0 1155218..1156255 + 345 113461191 potD HS_1048 - spermidine/putrescine-binding periplasmic protein 1056 35.43 0 1156362..1157408 - 348 113461192 degS HS_1049 - DegS serine peptidase 1057 40.23 0 1157428..1158558 - 376 113461193 ribD HS_1050 - diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase 1058 37.78 0 1158561..1159010 - 149 113461194 - HS_1051 - transcriptional regulator NrdR 1059 37.04 0 1159157..1159453 - 98 113461195 azlD HS_1052 - branched chain amino acid ABC transporter 1060 35.66 0 1159497..1160228 - 243 113461196 azlC HS_1053 - branched chain amino acid ABC transporter 1061 38.40 0 1160236..1161162 - 308 113461197 metR HS_1054 - transcriptional regulator 1062 41.13 +1 1161299..1162234 - 311 113461198 mdh HS_1055 - malate dehydrogenase 1063 36.32 0 1162457..1162924 + 155 113461199 argR HS_1056 - arginine repressor 1064 37.73 0 1162946..1163833 + 295 113461200 - HS_1057 - hypothetical protein 1065 40.69 +1 1163918..1172638 - 2906 113461201 - HS_1058 - large adhesin 1066 37.63 0 1173363..1173944 + 193 113461202 rnfA HS_1059 - Na(+)-translocating NADH-quinone reductase subunit E 1067 39.26 0 1173948..1174538 + 196 113461203 rnfB HS_1060 - electron transport complex protein RnfB 1068 40.76 +1 1174542..1176521 + 659 113461204 rnfC HS_1061 - electron transport complex protein RnfC 37.21 MEAN 3.48 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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