IslandPath Analysis: Haemophilus influenzae 86-028NP



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.35   STD DEV: 3.58
Haemophilus influenzae 86-028NP, complete genome - 1..1914490
1792 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1338	 43.91	+1	1439569..1440570	+	333	68249888	-	NTHI1532	-	hypothetical protein
1339	 43.92	+1	1440573..1440761	+	62	68249889	-	NTHI1533	-	hypothetical protein
1340	 45.01	+1	1440765..1441115	+	116	68249890	-	NTHI1534	-	hypothetical protein
1341	 43.79	+1	1441108..1441566	+	152	68249891	-	NTHI1535	-	hypothetical protein
1342	 45.28	+1	1441566..1441925	+	119	68249892	-	NTHI1536	-	hypothetical protein
1343	 41.37	0	1441927..1442436	+	169	68249893	-	NTHI1537	-	hypothetical protein
1344	 43.95	+1	1442423..1443496	+	357	68249894	-	NTHI1538	-	hypothetical protein
1345	 45.54	+2	1443542..1443967	+	141	68249895	-	NTHI1539	-	hypothetical protein
1346	 40.17	0	1443967..1444449	+	160	68249896	-	NTHI1540	-	hypothetical protein
1347	 43.14	+1	1444485..1444637	+	50	68249897	-	NTHI1541	-	hypothetical protein
1348	 45.29	+1	1444634..1447051	+	805	68249898	-	NTHI1542	-	phage-related minor tail protein
1349	 39.62	0	1447126..1447698	-	190	68249899	-	NTHI1543	-	hypothetical protein
1350	 43.30	+1	1448006..1448587	+	193	68249900	-	NTHI1544	-	hypothetical protein
1351	 37.46	0	1448584..1448898	+	104	68249901	-	NTHI1546	-	hypothetical protein
1352	 43.99	+1	1448895..1449851	+	318	68249902	-	NTHI1547	-	hypothetical protein
1353	 43.60	+1	1449854..1450525	+	223	68249903	-	NTHI1548	-	hypothetical protein
1354	 36.07	0	1450522..1450887	+	121	68249904	-	NTHI1549	-	hypothetical protein
1355	 40.15	0	1450880..1452316	+	478	68249905	-	NTHI1550	-	hypothetical protein
1356	 39.35	0	1452325..1452939	+	204	68249906	-	NTHI1551	-	hypothetical protein
1357	 40.02	0	1452949..1455297	+	782	68249907	-	NTHI1552	-	tail fiber protein
1358	 35.66	0	1455309..1455911	+	200	68249908	-	NTHI1553	-	hypothetical protein
1359	 39.72	0	1455908..1456408	+	166	68249909	-	NTHI1554	-	hypothetical protein
1360	 41.56	0	1456474..1456923	+	149	68249910	-	NTHI1555	-	hypothetical protein
1361	 43.56	+1	1456962..1457225	-	87	68249911	-	NTHI1556	-	hypothetical protein
1362	 39.01	0	1459009..1459290	-	93	68249912	-	NTHI1560	-	hypothetical protein
1363	 41.94	+1	1459338..1459523	+	61	68249913	-	NTHI1561	-	hypothetical protein
1364	 37.52	0	1459583..1460251	+	222	68249914	-	NTHI1562	-	hypothetical protein
1365	 34.69	-1	1460353..1460499	+	48	68249915	-	NTHI1563	-	hypothetical protein
1366	 41.15	0	1460532..1461068	+	178	68249916	-	NTHI1564	-	hypothetical protein
1367	 42.73	+1	1461269..1461715	+	148	68249917	-	NTHI1565	-	hypothetical protein
1368	 36.72	0	1461715..1461891	+	58	68249918	-	NTHI1566	-	hypothetical protein
1369	 45.15	+1	1461903..1462562	+	219	68249919	-	NTHI1567	-	hypothetical protein
1370	 36.16	0	1462562..1462738	+	58	68249920	-	NTHI1568	-	hypothetical protein
1371	 42.88	+1	1462751..1463305	+	184	68249921	-	NTHI1569	-	hypothetical protein
1372	 36.72	0	1463305..1463481	+	58	68249922	-	NTHI1570	-	hypothetical protein
1373	 43.48	+1	1463494..1464045	+	183	68249923	-	NTHI1571	-	hypothetical protein
1374	 40.98	0	1464321..1465406	+	361	68249924	prfA	NTHI1572	-	peptide chain release factor 1
1375	 37.79	0	1465429..1465899	+	156	68249925	-	NTHI1573	-	hypothetical protein
1376	 39.70	0	1465899..1466777	+	292	68249926	hemK	NTHI1574	-	hypothetical protein
1377	 38.93	0	1466777..1467580	+	267	68249927	-	NTHI1575	-	hypothetical protein
1378	 39.42	0	1467595..1468449	+	284	68249928	kdsA	NTHI1576	-	2-dehydro-3-deoxyphosphooctonate aldolase
1379	 39.66	0	1468509..1469456	+	315	68249929	-	NTHI1577	-	glycerate dehydrogenase
1380	 39.51	0	1469456..1470637	+	393	68249930	lolC	NTHI1578	-	lipoprotein releasing system transmembrane protein
1381	 40.22	0	1470649..1471941	+	430	68249931	bioA	NTHI1579	-	adenosylmethionine--8-amino-7-oxononanoate transaminase
1382	 39.56	0	1471950..1473089	+	379	68249932	bioF	NTHI1580	-	8-amino-7-oxononanoate synthase
1383	 38.73	0	1473099..1473746	+	215	68249933	-	NTHI1581	-	hypothetical protein
1384	 38.31	0	1473734..1474516	+	260	68249934	bioC	NTHI1582	-	putative biotin synthesis protein BioC
1385	 34.74	-1	1474526..1475167	+	213	68249935	bioD	NTHI1583	-	dithiobiotin synthetase
1386	 40.35	0	1475249..1475932	+	227	68249936	lolD	NTHI1585	-	lipoprotein releasing system ATP-binding protein LolD
1387	 38.13	0	1475932..1477182	+	416	68249937	lolE	NTHI1586	-	outer membrane-specific lipoprotein transporter subunit LolE
1388	 39.21	0	1477401..1478489	+	362	68249938	aroG	NTHI1587	-	phospho-2-dehydro-3-deoxyheptonate aldolase
1389	 32.88	-1	1478559..1478999	-	146	68249939	impA	NTHI1588	-	ImpA
1390	 37.91	0	1479284..1480528	+	414	68249940	-	NTHI1589	-	serine/threonine transporter SstT
1391	 33.66	-1	1480650..1481258	+	202	68249941	-	NTHI1590	-	putative NAD(P)H oxidoreductase
1392	 36.40	0	1481258..1481812	+	184	68249942	-	NTHI1591	-	putative component of anaerobic dehydrogenase
1393	 40.00	0	1481859..1482413	-	184	68249943	-	NTHI1592	-	nitroreductase
1394	 37.77	0	1482511..1484358	+	615	68249944	sppA	NTHI1593	-	protease IV
1395	 33.71	-1	1484396..1485193	-	265	68249945	licD	NTHI1594	-	phosphorylcholine transferase
1396	 34.19	-1	1485193..1485894	-	233	68249946	licC	NTHI1595	-	LicC
1397	 35.38	0	1485891..1486769	-	292	68249947	licB	NTHI1596	-	LicB
1398	 32.92	-1	1486769..1487728	-	319	68249948	licA	NTHI1597	-	LicA
1399	 40.49	0	1487816..1489828	-	670	68249949	mnmC	NTHI1599	-	5-methylaminomethyl-2-thiouridine methyltransferase
1400	 41.69	0	1489975..1491195	+	406	68249950	fabB	NTHI1600	-	3-oxoacyl-(acyl carrier protein) synthase I
1401	 36.74	0	1491258..1491521	-	87	68249951	grxA	NTHI1601	-	glutaredoxin 1
1402	 37.62	0	1491638..1492546	+	302	68249952	rimK	NTHI1602	-	ribosomal protein S6 modification protein
1403	 37.94	0	1492584..1493798	-	404	68249953	gltS	NTHI1603	-	Sodium/glutamate symport carrier protein
1404	 40.37	0	1493840..1496083	-	747	68249954	parC	NTHI1604	-	DNA topoisomerase IV subunit A
1405	 41.97	+1	1496150..1498048	-	632	68249955	parE	NTHI1605	-	DNA topoisomerase IV subunit B
1406	 41.24	0	1498122..1499057	-	311	68249956	htrB	NTHI1606	-	lipid A biosynthesis lauroyl acyltransferase
1407	 39.97	0	1499154..1500584	+	476	68249957	rfaE	NTHI1607	-	bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
1408	 31.37	-1	1501255..1501611	-	118	68249958	-	NTHI1611	-	hypothetical protein
1409	 39.75	0	1501722..1502126	+	134	68249959	uupA2	NTHI1612	-	ABC transporter ATP-binding protein
1410	 39.75	0	1502123..1502683	+	186	68249960	uppB	NTHI1613	-	ABC transporter ATP-binding protein
1411	 38.12	0	1502711..1503400	-	229	68249961	-	NTHI1614	-	putative carbonic anhydrase
1412	 39.96	0	1503476..1504879	-	467	161761265	asnC	NTHI1615	-	asparaginyl-tRNA synthetase
1413	 40.08	0	1505106..1505579	+	157	68249963	ribH	NTHI1616	-	riboflavin synthase subunit beta
1414	 39.31	0	1505583..1506017	+	144	68249964	nusB	NTHI1617	-	transcription antitermination protein NusB
1415	 37.99	0	1506084..1507070	+	328	68249965	thiL	NTHI1618	-	thiamine-monophosphate kinase
1416	 37.20	0	1507067..1507558	+	163	68249966	pgpA	NTHI1619	-	phosphatidylglycerophosphatase A
1417	 35.56	0	1507558..1508187	+	209	68249967	-	NTHI1620	-	threonine efflux protein
1418	 41.82	0	1508204..1509016	+	270	68249968	dapB	NTHI1621	-	dihydrodipicolinate reductase
1419	 34.14	-1	1509011..1509259	-	82	68249969	-	NTHI1622	-	ferredoxin-like protein
1420	 34.82	0	1509305..1510045	+	246	68249970	-	NTHI1623	-	hypothetical protein
1421	 38.79	0	1510194..1511183	+	329	68249971	pheS	NTHI1624	-	phenylalanyl-tRNA synthetase subunit alpha
1422	 40.45	0	1511217..1513604	+	795	68249972	pheT	NTHI1625	-	phenylalanyl-tRNA synthetase subunit beta
1423	 38.14	0	1513606..1513896	+	96	68249973	himA	NTHI1626	-	integration host factor alpha-subunit
1424	 39.92	0	1513949..1514434	+	161	68249974	-	NTHI1627	-	lipoprotein
1425	 36.10	0	1514443..1515453	+	336	68249975	-	NTHI1628	-	hypothetical protein
1426	 34.21	-1	1515512..1515967	+	151	68249976	-	NTHI1629	-	putative 5'(3')-deoxyribonucleotidase
1427	 42.48	+1	1515951..1516661	+	236	68249977	-	NTHI1630	-	NAD-dependent deacetylase
1428	 38.32	0	1516710..1517732	-	340	68249978	-	NTHI1631	-	hypothetical protein
1429	 33.83	-1	1517927..1518127	+	66	68249979	ftsK2	NTHI1632	-	DNA translocase FtsK
1430	 39.72	0	1518124..1518969	+	281	68249980	-	NTHI1634	-	NAD-dependent deacetylase sirtuin 5
1431	 39.11	0	1518969..1519730	+	253	68249981	-	NTHI1635	-	hypothetical protein
1432	 32.51	-1	1519808..1520782	+	324	68249982	-	NTHI1636	-	hypothetical protein
1433	 38.10	0	1520859..1521026	+	55	68249983	-	NTHI1637	-	hypothetical protein
1434	 42.13	+1	1521196..1522911	+	571	68249984	-	NTHI1638	-	serine/threonine protein phosphatase family protein
1435	 37.21	0	1522931..1523368	+	145	68249985	-	NTHI1639	-	arylsulfatase A-like enzyme
1436	 37.76	0	1523450..1524262	+	270	68249986	-	NTHI1640	-	enzyme related to aldose 1-epimerase
1437	 40.44	0	1524530..1524937	+	135	68249987	infC	NTHI1641	-	translation initiation factor IF-3
38.35	MEAN

3.58	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.