IslandPath Analysis: Hahella chejuensis KCTC 2396



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 53.37   STD DEV: 5.65
Hahella chejuensis KCTC 2396, complete genome - 1..7215267
6778 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3393	 54.80	0	3716072..3716863	+	263	83646306	-	HCH_03575	-	amino acid ABC transporter periplasmic protein
3394	 47.60	-1	3716820..3717569	-	249	83646307	-	HCH_03574	-	hypothetical protein
3395	 53.81	0	3717750..3718130	-	126	83646308	-	HCH_03576	-	hypothetical protein
3396	 50.14	0	3718374..3719081	+	235	83646309	-	HCH_03577	-	hypothetical protein
3397	 45.40	-1	3719173..3719694	+	173	83646310	-	HCH_03578	-	hypothetical protein
3398	 38.60	-2	3719775..3720116	+	113	83646311	-	HCH_03579	-	hypothetical protein
3399	 35.03	-2	3720172..3720642	-	156	83646312	-	HCH_03580	-	zinc metallopeptidase
3400	 34.85	-2	3720759..3720956	-	65	83646313	-	HCH_03581	-	hypothetical protein
3401	 45.97	-1	3721110..3722003	-	297	83646314	-	HCH_03582	-	hypothetical protein
3402	 47.71	-1	3722175..3722501	-	108	83646315	-	HCH_03583	-	hypothetical protein
3403	 52.94	0	3722956..3725046	-	696	83646316	-	HCH_03584	-	putative multicopper oxidases
3404	 59.80	+1	3725376..3725885	-	169	83646317	-	HCH_03585	-	transcriptional regulator
3405	 60.84	+1	3725995..3726612	+	205	83646318	-	HCH_03586	-	nitroreductase
3406	 58.41	0	3726842..3729178	+	778	83646319	-	HCH_03588	-	Signal transduction histidine kinase
3407	 57.73	0	3729045..3729872	-	275	83646320	-	HCH_03587	-	amino acid ABC transporter periplasmic protein
3408	 53.89	0	3729939..3730697	-	252	83646321	-	HCH_03589	-	amino acid ABC transporter periplasmic protein
3409	 58.33	0	3730990..3731661	-	223	83646322	-	HCH_03590	-	Outer membrane protein W
3410	 55.72	0	3731957..3733408	-	483	83646323	-	HCH_03591	-	Outer membrane protein and related peptidoglycan-associated (lipo)protein
3411	 58.91	0	3733580..3733837	-	85	83646324	-	HCH_03593	-	hypothetical protein
3412	 59.43	+1	3733957..3734343	-	128	83646325	-	HCH_03594	-	glyoxalase/bleomycin resistance protein
3413	 59.33	+1	3734471..3735547	-	358	83646326	-	HCH_03595	-	hypothetical protein
3414	 56.97	0	3735802..3736131	-	109	83646327	-	HCH_03596	-	hypothetical protein
3415	 58.70	0	3736343..3736756	+	137	83646328	-	HCH_03597	-	hypothetical protein
3416	 53.41	0	3737049..3738707	+	552	83646329	-	HCH_03599	-	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
3417	 54.94	0	3738704..3739786	+	360	83646330	-	HCH_03600	-	cytochrome P450
3418	 53.75	0	3739866..3740879	+	337	83646331	-	HCH_03601	-	cytochrome P450
3419	 48.02	0	3740876..3741127	+	83	83646332	-	HCH_03602	-	polyketide synthase modules and related protein
3420	 55.58	0	3741124..3742809	+	561	83646333	-	HCH_03603	-	carbamoyl transferase
3421	 50.29	0	3742820..3744376	+	518	83646334	-	HCH_03604	-	D-alanine export protein
3422	 48.36	0	3744392..3745336	+	314	83646335	-	HCH_03605	-	hypothetical protein
3423	 55.68	0	3745369..3746196	+	275	83646336	-	HCH_03606	-	amino acid ABC transporter periplasmic protein
3424	 54.46	0	3746202..3746717	-	171	83646337	-	HCH_03607	-	hypothetical protein
3425	 57.86	0	3746961..3747278	+	105	83646338	-	HCH_03608	-	zinc finger domain-containing protein
3426	 47.59	-1	3747527..3748003	+	158	83646339	-	HCH_03609	-	hypothetical protein
3427	 46.12	-1	3748125..3748601	+	158	83646340	-	HCH_03610	-	hypothetical protein
3428	 48.10	0	3748635..3749108	+	157	83646341	-	HCH_03611	-	hypothetical protein
3429	 61.09	+1	3749134..3750549	-	471	83646342	-	HCH_03612	-	Signal transduction histidine kinase
3430	 59.24	+1	3750527..3751213	-	228	83646343	-	HCH_03613	-	response regulator
3431	 57.46	0	3751550..3751777	+	75	83646344	-	HCH_03614	-	hypothetical protein
3432	 56.43	0	3751902..3753542	-	546	83646345	-	HCH_03615	-	hypothetical protein
3433	 58.22	0	3753529..3754665	-	378	83646346	-	HCH_03616	-	hypothetical protein
3434	 58.05	0	3754671..3756284	-	537	83646347	-	HCH_03617	-	hypothetical protein
3435	 57.44	0	3756654..3757694	-	346	83646348	-	HCH_03618	-	Zn-dependent hydrolase
3436	 59.26	+1	3757803..3758747	+	314	83646349	-	HCH_03619	-	transcriptional regulator
3437	 58.02	0	3758991..3759962	+	323	83646350	-	HCH_03620	-	DMT superfamily permease
3438	 58.76	0	3760070..3761347	+	425	83646351	-	HCH_03621	-	Fe-S oxidoreductase
3439	 59.66	+1	3761361..3762302	+	313	83646352	-	HCH_03622	-	arginase
3440	 45.83	-1	3762737..3764737	+	666	83646353	-	HCH_03623	-	methyl-accepting chemotaxis protein
3441	 44.19	-1	3764734..3765525	+	263	83646354	-	HCH_03624	-	flagellar motor protein
3442	 43.86	-1	3765522..3767003	+	493	83646355	-	HCH_03626	-	hypothetical protein
3443	 47.50	-1	3766068..3766187	-	39	83646356	-	HCH_03625	-	hypothetical protein
3444	 43.56	-1	3767004..3770015	+	1003	83646357	-	HCH_03627	-	SNF2 family DNA/RNA helicase
3445	 52.38	0	3770063..3770482	-	139	83646358	-	HCH_03628	-	hypothetical protein
3446	 56.43	0	3770524..3771324	-	266	83646359	-	HCH_03629	-	hypothetical protein
3447	 56.44	0	3771508..3772563	-	351	83646360	-	HCH_03630	-	Beta-lactamase class C and other penicillin binding protein
3448	 49.03	0	3772802..3773266	+	154	83646361	bfr1	HCH_03631	-	bacterioferritin
3449	 58.22	0	3773510..3774634	-	374	83646362	-	HCH_03632	-	permease
3450	 55.74	0	3774753..3775484	-	243	83646363	-	HCH_03633	-	FOG: CheY-like receiver
3451	 55.56	0	3775584..3775952	-	122	83646364	-	HCH_03634	-	hypothetical protein
3452	 59.60	+1	3775666..3775764	+	32	83646365	-	HCH_03635	-	hypothetical protein
3453	 50.06	0	3776331..3777227	+	298	83646366	-	HCH_03636	-	hypothetical protein
3454	 54.98	0	3777224..3777514	-	96	83646367	-	HCH_03637	-	hypothetical protein
3455	 55.00	0	3777398..3777517	+	39	83646368	-	HCH_03638	-	hypothetical protein
3456	 50.12	0	3777688..3778497	-	269	83646369	-	HCH_03639	-	deoxygenase
3457	 42.08	-1	3778628..3778867	+	79	83646370	-	HCH_03640	-	hypothetical protein
3458	 55.80	0	3778879..3780120	+	413	83646371	dapF2	HCH_03641	-	diaminopimelate epimerase
3459	 60.53	+1	3780196..3782475	+	759	83646372	-	HCH_03642	-	major facilitator superfamily protein
3460	 60.29	+1	3782489..3783994	+	501	83646373	-	HCH_03643	-	hypothetical protein
3461	 54.79	0	3784145..3785323	+	392	83646374	-	HCH_03644	-	ABC-type uncharacterized transport system, periplasmic component
3462	 55.53	0	3785372..3786547	+	391	83646375	-	HCH_03645	-	ABC-type uncharacterized transport system, periplasmic component
3463	 55.79	0	3786550..3789078	+	842	83646376	-	HCH_03646	-	Signal transduction histidine kinase
3464	 55.19	0	3789177..3791702	-	841	83646377	-	HCH_03647	-	signal transduction protein
3465	 57.91	0	3791829..3793883	-	684	83646378	-	HCH_03648	-	elongation factor G
3466	 60.62	+1	3794356..3797148	-	930	83646379	-	HCH_03649	-	molecular chaperone
3467	 61.23	+1	3797151..3799007	-	618	83646380	-	HCH_03650	-	molecular chaperone
3468	 55.22	0	3799004..3799597	-	197	83646381	-	HCH_03651	-	hypothetical protein
3469	 41.20	-2	3799914..3800129	-	71	83646382	-	HCH_03652	-	hypothetical protein
3470	 47.06	-1	3800570..3800671	-	33	83646383	-	HCH_03653	-	hypothetical protein
3471	 51.39	0	3800643..3800930	+	95	83646384	-	HCH_03654	-	hypothetical protein
3472	 50.88	0	3800940..3801167	-	75	83646385	-	HCH_03655	-	hypothetical protein
3473	 53.89	0	3801306..3802244	+	312	83646386	cdtB	HCH_03656	-	cytolethal distending toxin B-like protein
3474	 46.93	-1	3802268..3802789	+	173	83646387	-	HCH_03657	-	hypothetical protein
3475	 58.72	0	3802866..3803696	-	276	83646388	-	HCH_03658	-	SAM-dependent methyltransferase
3476	 47.48	-1	3803942..3804556	-	204	83646389	-	HCH_03659	-	hypothetical protein
3477	 38.74	-2	3804531..3804641	+	36	83646390	-	HCH_03660	-	hypothetical protein
3478	 53.74	0	3804695..3805576	+	293	83646391	-	HCH_03661	-	hypothetical protein
3479	 55.09	0	3806137..3807492	-	451	83646392	phy	HCH_03662	-	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
3480	 57.38	0	3807596..3808930	-	444	83646393	-	HCH_03663	-	hypothetical protein
3481	 50.67	0	3809179..3809628	+	149	83646394	-	HCH_03664	-	hypothetical protein
3482	 59.12	+1	3809780..3812176	-	798	83646395	-	HCH_03665	-	phosphohydrolase
3483	 61.14	+1	3812237..3812905	-	222	83646396	-	HCH_03666	-	hypothetical protein
3484	 60.71	+1	3812902..3814428	-	508	83646397	-	HCH_03667	-	hypothetical protein
3485	 58.85	0	3815109..3815684	-	191	83646398	-	HCH_03668	-	hypothetical protein
3486	 55.33	0	3816170..3816901	-	243	83646399	-	HCH_03669	-	endoglucanase
3487	 56.44	0	3817095..3817994	+	299	83646400	-	HCH_03670	-	EF hand domain-containing protein
3488	 54.46	0	3817998..3818546	+	182	83646401	-	HCH_03671	-	hypothetical protein
3489	 54.13	0	3818543..3818869	+	108	83646402	-	HCH_03672	-	hypothetical protein
3490	 50.93	0	3819057..3819164	+	35	83646403	-	HCH_03673	-	hypothetical protein
3491	 58.90	0	3819336..3821666	+	776	83646404	-	HCH_03674	-	hypothetical protein
3492	 56.04	0	3821798..3822004	+	68	83646405	-	HCH_03677	-	hypothetical protein
53.37	MEAN

5.65	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.