IslandPath Analysis: Gloeobacter violaceus PCC 7421



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.08   STD DEV: 4.75
Gloeobacter violaceus PCC 7421, complete genome - 1..4659019
4430 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
299	 61.15	0	307464..308279	-	271	37519868	-	gll0299	-	hypothetical protein
300	 68.59	+1	308371..309408	-	345	37519869	-	gll0300	-	hypothetical protein
301	 63.62	0	309386..309877	+	163	37519870	-	glr0301	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
302	 61.65	0	309882..312275	-	797	37519871	-	gll0302	-	ferric aerobactin receptor
303	 60.37	0	312678..313169	+	163	37519872	-	glr0303	-	hypothetical protein
304	 62.79	0	313212..313934	-	240	37519873	-	gll0304	-	hypothetical protein
305	 64.33	0	314032..315057	-	341	37519874	-	gll0305	-	hypothetical protein
306	 61.80	0	315094..315360	-	88	37519875	-	gsl0306	-	hypothetical protein
307	 54.97	-1	315439..315951	-	170	37519876	isiB	gvip026	-	flavodoxin FldA
308	 65.33	0	315987..316658	-	223	37519877	-	gll0308	-	CRP family transcriptional regulator
309	 63.48	0	316963..317526	+	187	37519878	-	glr0309	-	hypothetical protein
310	 64.40	0	317622..318503	+	293	37519879	-	glr0310	-	hypothetical protein
311	 64.16	0	318519..320795	-	758	37519880	-	gll0311	-	ferrichrome-iron receptor
312	 66.85	+1	320875..321987	-	370	37519881	-	gll0312	-	hypothetical protein
313	 62.21	0	321991..324255	-	754	37519882	-	gll0313	-	ferrichrome-iron receptor
314	 59.26	0	324692..325204	+	170	37519883	isiB	gvip027	-	flavodoxin FldA
315	 68.38	+1	325296..325646	+	116	37519884	-	glr0315	-	hypothetical protein
316	 64.50	0	325650..326435	+	261	37519885	-	glr0316	-	tetracenomycin C synthesis protein
317	 66.67	0	326615..327463	+	282	37519886	-	glr0317	-	hypothetical protein
318	 62.62	0	327661..328575	+	304	37519887	-	glr0318	-	hypothetical protein
319	 63.96	0	328649..330973	-	774	37519888	-	gll0319	-	ferrichrome-iron receptor
320	 62.14	0	331223..332194	-	323	37519889	-	gll0320	-	AraC family transcription regulator
321	 66.21	0	332307..334064	-	585	37519890	-	gll0321	-	HlyB/MsbA family ABC transporter
322	 66.50	0	334054..335901	-	615	37519891	-	gll0322	-	HlyB/MsbA family ABC transporter
323	 65.06	0	335898..336332	-	144	37519892	-	gll0323	-	hypothetical protein
324	 63.55	0	336517..337542	-	341	37519893	-	gll0324	-	AraC family transcription regulator
325	 66.95	+1	337790..338506	+	238	37519894	-	glr0325	-	CRP family transcriptional regulator
326	 62.94	0	338503..339495	+	330	37519895	-	glr0326	-	AraC family transcription regulator
327	 63.19	0	339653..342181	+	842	37519896	-	glr0327	-	TonB-dependent receptor
328	 61.99	0	342183..342866	+	227	37519897	-	glr0328	-	hypothetical protein
329	 65.72	0	342983..343300	+	105	37519898	-	glr0329	-	hypothetical protein
330	 66.43	0	343427..344263	+	278	37519899	-	glr0330	-	hypothetical protein
331	 60.68	0	344279..346114	-	611	37519900	-	gll0331	-	ferrichrome-iron receptor
332	 62.57	0	346125..346490	-	121	37519901	-	gll0332	-	ferrichrome-iron receptor
333	 54.35	-1	346581..347798	+	405	37519902	-	glr0333	-	putative transposase
334	 49.70	-2	348049..348213	-	54	37519903	-	gsl0334	-	hypothetical protein
335	 56.81	-1	348289..349272	-	327	37519904	-	gll0335	-	AraC family transcription regulator
336	 65.23	0	349528..351063	-	511	37519905	-	gll0336	-	hypothetical protein
337	 60.99	0	351486..352049	-	187	37519906	-	gll0337	-	nutrient-stress induced DNA binding protein
338	 62.53	0	352332..353153	-	273	37519907	-	gll0338	-	tetracenomycin C synthesis protein
339	 63.83	0	353372..353794	-	140	37519908	-	gll0339	-	ferrichrome-iron receptor
340	 60.49	0	353791..353952	-	53	37519909	-	gsl0340	-	hypothetical protein
341	 63.29	0	354153..354923	+	256	37519910	-	glr0341	-	hypothetical protein
342	 58.67	0	354981..356081	-	366	37519911	-	gll0342	-	hypothetical protein
343	 61.58	0	356086..358464	-	792	37519912	-	gll0343	-	ferrichrome-iron receptor
344	 62.64	0	358626..359420	-	264	37519913	-	gll0344	-	hypothetical protein
345	 64.26	0	359542..360747	-	401	37519914	-	gll0345	-	hypothetical protein
346	 67.42	+1	360751..362079	-	442	37519915	-	gll0346	-	hypothetical protein
347	 61.87	0	362228..363436	+	402	37519916	-	glr0347	-	two-component sensor histidine kinase
348	 62.72	0	363433..364065	+	210	37519917	-	glr0348	-	two-component response regulator
349	 62.69	0	364135..366495	+	786	37519918	-	glr0349	-	ferrichrome-iron receptor
350	 60.35	0	366686..367477	-	263	37519919	-	gll0350	-	hypothetical protein
351	 57.22	-1	367719..367898	-	59	37519920	-	gsl0351	-	hypothetical protein
352	 60.44	0	367920..368240	+	106	37519921	-	glr0352	-	transcriptional regulator
353	 50.31	-2	368398..370635	+	745	37519922	-	glr0353	-	ferrichrome-iron receptor
354	 65.82	0	370758..371231	+	157	37519923	-	glr0354	-	ferrichrome-iron receptor
355	 60.67	0	371347..371613	-	88	37519924	-	gsl0355	-	hypothetical protein
356	 55.56	-1	371990..372250	+	86	37519925	-	gsr0356	-	hypothetical protein
357	 55.14	-1	372250..372570	+	106	37519926	-	glr0357	-	hypothetical protein
358	 60.00	0	372702..372821	+	39	37519927	-	gsr0358	-	hypothetical protein
359	 62.75	0	373032..373874	+	280	37519928	-	glr0359	-	hypothetical protein
360	 60.16	0	373890..374273	-	127	37519929	-	gll0360	-	ferrichrome-iron receptor
361	 64.18	0	374437..376647	-	736	37519930	-	gll0361	-	ferrichrome-iron receptor
362	 66.95	+1	376670..377746	-	358	37519931	-	gll0362	-	hypothetical protein
363	 63.02	0	378002..379483	-	493	37519932	-	gll0363	-	hypothetical protein
364	 64.55	0	379482..379907	+	141	37519933	-	glr0364	-	hypothetical protein
365	 62.79	0	379904..380419	-	171	37519934	-	gll0365	-	hypothetical protein
366	 63.06	0	380413..380745	-	110	37519935	-	gll0366	-	ferredoxin
367	 61.98	0	380846..381592	-	248	37519936	-	gll0367	-	aquaporin Z
368	 53.54	-1	381736..382809	-	357	37519937	-	gll0368	-	hypothetical protein
369	 65.89	0	383159..384193	+	344	37519938	-	glr0369	-	dehydrogenase
370	 62.38	0	384452..385057	+	201	37519939	-	glr0370	-	hypothetical protein
371	 65.17	0	385225..386628	-	467	37519940	-	gll0371	-	putative transposase
372	 64.95	0	386920..387561	-	213	37519941	-	gll0372	-	hypothetical protein
373	 60.55	0	387592..389520	+	642	37519942	-	glr0373	-	cyclomaltodextrin glucanotransferase
374	 65.69	0	389550..390773	+	407	37519943	-	glr0374	-	N-acyl-L-amino acid amidohydrolase
375	 65.69	0	390875..392623	+	582	37519944	-	glr0375	-	hypothetical protein
376	 62.86	0	392640..394373	+	577	37519945	-	glr0376	-	two-component sensor histidine kinase
377	 65.42	0	394342..395061	-	239	37519946	cobI	gvip028	-	precorrin-2 methyltransferase
378	 68.54	+1	395058..396287	-	409	37519947	cobL	gvip029	-	precorrin-6Y methylase
379	 64.01	0	396342..396980	-	212	37519948	-	gll0379	-	two-component response regulator
380	 60.77	0	396973..398040	-	355	37519949	-	gll0380	-	two-component sensor histidine kinase
381	 64.62	0	398341..399660	+	439	37519950	-	glr0381	-	hypothetical protein
382	 63.44	0	399707..402934	+	1075	37519951	-	glr0382	-	cation efflux system membrane protein CzcA-like protein
383	 63.71	0	403202..405469	-	755	37519952	-	gll0383	-	potassium efflux transporter
384	 63.99	0	405587..406183	-	198	37519953	cobH	gvip030	-	precorrin-8X methylmutase
385	 62.44	0	406192..406854	+	220	37519954	cobO	gvip031	-	cob(I)alamin adenosyltransferase
386	 43.27	-2	407182..408318	+	378	37519955	-	glr0386	-	hypothetical protein
387	 62.32	0	408371..410005	-	544	37519956	-	gll0387	-	hypothetical protein
388	 65.25	0	410021..411436	+	471	37519957	-	glr0388	-	phosphoglucomutase/phosphomannomutase
389	 61.04	0	411428..411676	-	82	37519958	-	gsl0389	-	hypothetical protein
390	 58.33	0	411716..411979	+	87	37519959	-	gsr0390	-	hypothetical protein
391	 63.50	0	411984..412772	-	262	37519960	-	gll0391	-	hypothetical protein
392	 55.20	-1	412876..413154	+	92	37519961	-	gsr0392	-	hypothetical protein
393	 51.84	-2	413184..413864	+	226	37519962	-	glr0393	-	hypothetical protein
394	 62.83	0	414059..415780	-	573	37519963	crtO	gvip032	-	beta-carotene ketolase
395	 63.75	0	415943..416869	+	308	37519964	-	glr0395	-	hypothetical protein
396	 40.32	-2	416900..417700	-	266	37519965	-	gll0396	-	hypothetical protein
397	 65.64	0	418932..420098	-	388	37519966	bioF	gvip033	-	8-amino-7-oxononanoate synthase
398	 67.20	+1	420221..420976	+	251	37519967	-	glr0398	-	hypothetical protein
62.08	MEAN

4.75	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.