IslandPath Analysis: Gloeobacter violaceus PCC 7421



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.08   STD DEV: 4.75
Gloeobacter violaceus PCC 7421, complete genome - 1..4659019
4430 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2883	 64.25	0	3074339..3074875	+	178	37522452	-	glr2883	-	hypothetical protein
2884	 68.44	+1	3074872..3075492	+	206	37522453	ruvA	gvip394	-	Holliday junction DNA helicase motor protein
2885	 64.76	0	3075494..3076699	-	401	37522454	-	gll2885	-	hypothetical protein
2886	 61.52	0	3076742..3078625	+	627	37522455	thrS	gvip395	-	threonyl-tRNA synthetase
2887	 63.91	0	3078699..3079787	+	362	37522456	-	glr2887	-	hypothetical protein
2888	 65.87	0	3079825..3083070	-	1081	37522457	-	gll2888	-	WD repeat-containing protein
2889	 64.24	0	3083198..3084187	+	329	37522458	-	glr2889	-	hypothetical protein
2890	 41.48	-2	3084462..3084854	-	130	37522459	-	gll2890	-	ketosteroid isomerase
2891	 65.85	0	3085034..3085888	-	284	37522460	-	gll2891	-	hypothetical protein
2892	 65.14	0	3085915..3087288	-	457	37522461	-	gll2892	-	hypothetical protein
2893	 65.08	0	3087758..3088009	+	83	37522462	-	gsr2893	-	hypothetical protein
2894	 67.01	+1	3088511..3090520	+	669	37522463	-	glr2894	-	hypothetical protein
2895	 66.16	0	3090517..3093453	+	978	37522464	-	glr2895	-	hypothetical protein
2896	 61.54	0	3093516..3093827	+	103	37522465	groES	gvip396	-	co-chaperonin GroES
2897	 62.64	0	3093866..3095527	+	553	37522466	groEL	gvip397	-	chaperonin GroEL
2898	 62.36	0	3095649..3096368	+	239	37522467	-	glr2898	-	ABC transporter ATP-binding protein
2899	 56.47	-1	3096390..3096791	-	133	37522468	-	gll2899	-	hypothetical protein
2900	 51.64	-2	3096778..3096990	-	70	37522469	-	gsl2900	-	hypothetical protein
2901	 58.06	0	3097149..3097601	-	150	37522470	-	gll2901	-	hypothetical protein
2902	 65.35	0	3097703..3098767	-	354	37522471	-	gll2902	-	hypothetical protein
2903	 62.03	0	3098805..3099041	-	78	37522472	-	gsl2903	-	hypothetical protein
2904	 63.59	0	3099191..3101137	+	648	37522473	-	glr2904	-	hypothetical protein
2905	 63.04	0	3101389..3102930	-	513	37522474	atpA	gvip398	-	F0F1 ATP synthase subunit alpha
2906	 61.11	0	3102947..3103504	-	185	37522475	atpD	gvip399	-	ATP synthase delta chain of CF(1)
2907	 64.96	0	3103508..3104035	-	175	37522476	atpF	gvip400	-	F0F1 ATP synthase subunit B
2908	 64.38	0	3104035..3104559	-	174	37522477	atpG	gvip401	-	F0F1 ATP synthase subunit B'
2909	 63.45	0	3104582..3104830	-	82	37522478	atpH	gvip402	-	F0F1 ATP synthase subunit C
2910	 56.01	-1	3104880..3105620	-	246	37522479	atpI	gvip403	-	F0F1 ATP synthase subunit A
2911	 55.06	-1	3105648..3106052	-	134	37522480	atp1	gvip404	-	ATP synthase protein I
2912	 58.62	0	3106204..3106377	-	57	37522481	-	gsl2912	-	hypothetical protein
2913	 68.32	+1	3106421..3106783	+	120	37522482	-	glr2913	-	hypothetical protein
2914	 67.00	+1	3106830..3107435	+	201	37522483	-	glr2914	-	hypothetical protein
2915	 55.34	-1	3107542..3107850	+	102	37522484	-	glr2915	-	hypothetical protein
2916	 66.16	0	3107813..3108604	-	263	37522485	-	gll2916	-	hypothetical protein
2917	 54.13	-1	3108987..3110366	+	459	37522486	-	glr2917	-	hypothetical protein
2918	 51.59	-2	3110354..3111388	+	344	37522487	-	glr2918	-	hypothetical protein
2919	 63.77	0	3111474..3114167	+	897	37522488	valS	gvip405	-	valyl-tRNA synthetase
2920	 65.75	0	3115439..3116860	-	473	37522489	-	gll2920	-	hypothetical protein
2921	 65.17	0	3117121..3117786	+	221	37522490	-	glr2921	-	hypothetical protein
2922	 63.91	0	3117789..3118586	+	265	37522491	-	glr2922	-	hypothetical protein
2923	 60.91	0	3118570..3118986	+	138	37522492	-	glr2923	-	hypothetical protein
2924	 69.32	+1	3119034..3120467	-	477	37522493	-	gll2924	-	polyA polymerase
2925	 69.22	+1	3120796..3121383	+	195	37522494	-	glr2925	-	RNA-binding protein
2926	 66.62	0	3121496..3123853	-	785	37522495	pheT	gvip406	-	phenylalanyl-tRNA synthetase subunit beta
2927	 65.82	0	3124021..3124965	+	314	37522496	-	glr2927	-	hypothetical protein
2928	 69.56	+1	3124962..3125411	+	149	37522497	-	glr2928	-	hypothetical protein
2929	 67.26	+1	3125411..3127252	+	613	37522498	-	glr2929	-	penicillin-binding protein
2930	 68.41	+1	3127210..3127782	-	190	37522499	-	gll2930	-	hypothetical protein
2931	 55.07	-1	3127853..3128197	-	114	37522500	-	gll2931	-	hypothetical protein
2932	 57.80	0	3128201..3128527	-	108	37522501	-	gll2932	-	hypothetical protein
2933	 65.50	0	3128724..3129920	+	398	37522502	argG	gvip407	-	argininosuccinate synthase
2934	 61.13	0	3129926..3130972	-	348	37522503	-	gll2934	-	hypothetical protein
2935	 66.67	0	3130952..3131992	+	346	37522504	-	glr2935	-	hypothetical protein
2936	 51.28	-2	3132049..3132438	+	129	37522505	-	glr2936	-	hypothetical protein
2937	 53.58	-1	3132493..3133134	+	213	37522506	-	glr2937	-	hypothetical protein
2938	 52.05	-2	3133077..3133295	+	72	37522507	-	gsr2938	-	hypothetical protein
2939	 65.05	0	3133597..3134649	-	350	37522508	-	gll2939	-	hypothetical protein
2940	 68.23	+1	3134650..3135801	+	383	37522509	-	glr2940	-	hypothetical protein
2941	 67.24	+1	3135885..3140555	+	1556	37522510	-	glr2941	-	hypothetical protein
2942	 59.84	0	3140645..3141010	+	121	37522511	-	glr2942	-	single-strand DNA-binding protein
2943	 65.81	0	3141011..3141823	+	270	37522512	-	glr2943	-	nitrilase-like protein
2944	 62.89	0	3141939..3142892	+	317	37522513	-	glr2944	-	succinate dehydrogenase iron-sulfur subunit
2945	 66.33	0	3142889..3143785	+	298	37522514	-	glr2945	-	succinate dehydrogenase chain C
2946	 63.16	0	3143830..3144057	+	75	37522515	-	gsr2946	-	hypothetical protein
2947	 63.94	0	3144240..3144716	+	158	37522516	-	glr2947	-	hypothetical protein
2948	 62.73	0	3144772..3145584	-	270	37522517	-	gll2948	-	hypothetical protein
2949	 56.08	-1	3145692..3148826	+	1044	37522518	-	glr2949	-	hypothetical protein
2950	 61.02	0	3149193..3150131	-	312	37522519	-	gll2950	-	hypothetical protein
2951	 59.47	0	3150118..3150687	-	189	37522520	-	gll2951	-	hypothetical protein
2952	 64.22	0	3150744..3150947	-	67	37522521	-	gsl2952	-	hypothetical protein
2953	 57.31	-1	3151295..3152074	+	259	37522522	-	glr2953	-	hypothetical protein
2954	 59.04	0	3152034..3153173	-	379	37522523	-	gll2954	-	hypothetical protein
2955	 61.44	0	3153270..3153575	-	101	37522524	-	gll2955	-	hypothetical protein
2956	 51.96	-2	3153614..3154225	-	203	37522525	-	gll2956	-	hypothetical protein
2957	 60.32	0	3154225..3155091	-	288	37522526	-	gll2957	-	hypothetical protein
2958	 57.74	0	3155123..3155794	-	223	37522527	-	gll2958	-	hypothetical protein
2959	 62.60	0	3155901..3156515	-	204	37522528	-	gll2959	-	hypothetical protein
2960	 58.52	0	3156630..3157022	-	130	37522529	-	gll2960	-	hypothetical protein
2961	 61.56	0	3157701..3158600	+	299	37522530	-	glr2961	-	hypothetical protein
2962	 64.57	0	3158667..3159668	+	333	37522531	-	glr2962	-	hypothetical protein
2963	 61.86	0	3159987..3161150	+	387	37522532	-	glr2963	-	hypothetical protein
2964	 58.11	0	3161158..3161613	+	151	37522533	-	glr2964	-	hypothetical protein
2965	 59.75	0	3161632..3163047	+	471	37522534	-	glr2965	-	hypothetical protein
2966	 55.54	-1	3163063..3166314	+	1083	37522535	-	glr2966	-	hypothetical protein
2967	 50.11	-2	3166314..3167201	+	295	37522536	-	glr2967	-	hypothetical protein
2968	 59.81	0	3167198..3168976	+	592	37522537	-	glr2968	-	hypothetical protein
2969	 49.70	-2	3169023..3170183	+	386	37522538	-	glr2969	-	hypothetical protein
2970	 63.27	0	3170290..3170907	+	205	37522539	-	glr2970	-	hypothetical protein
2971	 58.20	0	3170904..3171482	+	192	37522540	-	glr2971	-	hypothetical protein
2972	 50.94	-2	3171502..3172137	-	211	37522541	-	gll2972	-	hypothetical protein
2973	 62.77	0	3172181..3172975	-	264	37522542	-	gll2973	-	hypothetical protein
2974	 67.23	+1	3172975..3173685	-	236	37522543	-	gll2974	-	2-phosphosulfolactate phosphatase
2975	 70.39	+1	3173693..3174604	-	303	37522544	-	gll2975	-	hypothetical protein
2976	 70.50	+1	3174604..3175620	-	338	37522545	-	gll2976	-	hypothetical protein
2977	 59.49	0	3175775..3176206	+	143	37522546	-	glr2977	-	MarR family transcriptional regulator
2978	 69.63	+1	3176193..3178148	+	651	37522547	-	glr2978	-	hypothetical protein
2979	 61.74	0	3178078..3179781	+	567	37522548	-	glr2979	-	hypothetical protein
2980	 66.27	0	3179778..3181028	+	416	37522549	-	glr2980	-	hypothetical protein
2981	 62.29	0	3181025..3182167	+	380	37522550	-	glr2981	-	hypothetical protein
2982	 55.86	-1	3182162..3182596	-	144	37522551	-	gll2982	-	hypothetical protein
62.08	MEAN

4.75	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.