IslandPath Analysis: Gloeobacter violaceus PCC 7421



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.08   STD DEV: 4.75
Gloeobacter violaceus PCC 7421, complete genome - 1..4659019
4430 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1618	 62.38	0	1734743..1735162	-	139	37521187	-	gll1618	-	hypothetical protein
1619	 66.34	0	1735391..1736302	-	303	37521188	-	gll1619	-	histone deacetylase family protein
1620	 60.81	0	1736313..1736534	-	73	37521189	-	gsl1620	-	DNA-directed RNA polymerase subunit omega
1621	 63.92	0	1736515..1737132	-	205	37521190	-	gll1621	-	guanylate kinase
1622	 64.86	0	1737266..1738981	+	571	37521191	-	glr1622	-	fibronectin binding protein
1623	 59.91	0	1739007..1739228	+	73	37521192	-	gsr1623	-	hypothetical protein
1624	 63.26	0	1739215..1739625	+	136	37521193	-	glr1624	-	hypothetical protein
1625	 62.98	0	1739622..1740815	-	397	37521194	-	gll1625	-	hypothetical protein
1626	 66.03	0	1741182..1741805	+	207	37521195	-	glr1626	-	hypothetical protein
1627	 55.10	-1	1741844..1742137	-	97	37521196	-	gsl1627	-	putative transposase
1628	 59.16	0	1742154..1742606	-	150	37521197	-	gll1628	-	putative transposase
1629	 68.99	+1	1742667..1743740	-	357	37521198	cbiD	gll1629	-	cobalt-precorrin-6A synthase
1630	 59.16	0	1743963..1749155	+	1730	37521199	-	glr1630	-	WD-40 repeat-containing protein
1631	 48.18	-2	1749261..1749866	-	201	37521200	-	gll1631	-	hypothetical protein
1632	 44.30	-2	1749974..1750210	-	78	37521201	-	gsl1632	-	hypothetical protein
1633	 57.19	-1	1750264..1750548	+	94	37521202	-	gsr1633	-	hypothetical protein
1634	 65.14	0	1750673..1751656	+	327	37521203	-	glr1634	-	hypothetical protein
1635	 61.84	0	1751668..1752144	-	158	37521204	-	gll1635	-	hypothetical protein
1636	 65.21	0	1752172..1752927	-	251	37521205	cobK	gvip229	-	cobalt-precorrin-6x reductase
1637	 66.09	0	1753072..1754289	+	405	37521206	-	glr1637	-	hypothetical protein
1638	 62.21	0	1754286..1755317	+	343	37521207	-	glr1638	-	hypothetical protein
1639	 67.52	+1	1755371..1755841	+	156	37521208	-	glr1639	-	hypothetical protein
1640	 64.90	0	1755894..1756628	-	244	37521209	-	gll1640	-	acetyltransferase
1641	 63.91	0	1756672..1757070	-	132	37521210	-	gll1641	-	hypothetical protein
1642	 64.19	0	1757266..1757709	-	147	37521211	-	gll1642	-	hypothetical protein
1643	 57.46	0	1757962..1758276	-	104	37521212	-	gll1643	-	hypothetical protein
1644	 64.73	0	1758752..1759834	-	360	37521213	-	gll1644	-	hypothetical protein
1645	 60.93	0	1759918..1760196	-	92	37521214	-	gsl1645	-	pterin-4a-carbinolamine dehydratase
1646	 67.63	+1	1760302..1762476	+	724	37521215	glyS	gvip230	-	glycyl-tRNA synthetase subunit beta
1647	 61.45	0	1762469..1762717	+	82	37521216	-	gsr1647	-	hypothetical protein
1648	 63.50	0	1762882..1763292	+	136	37521217	-	glr1648	-	hypothetical protein
1649	 64.08	0	1763355..1764863	+	502	37521218	ycf46	gvip231	-	hypothetical protein
1650	 70.02	+1	1764875..1765678	+	267	37521219	-	glr1650	-	hypothetical protein
1651	 62.96	0	1765675..1766349	-	224	37521220	-	gll1651	-	hypothetical protein
1652	 66.97	+1	1766316..1767647	-	443	37521221	-	gll1652	-	amino acid transporter
1653	 64.55	0	1767682..1768908	-	408	37521222	-	gll1653	-	hypothetical protein
1654	 62.70	0	1768665..1769798	-	377	37521223	-	gll1654	-	hypothetical protein
1655	 62.60	0	1770042..1770950	-	302	37521224	-	gll1655	-	hypothetical protein
1656	 64.60	0	1771133..1771858	+	241	37521225	-	glr1656	-	phosphoadenosine phosphosulfate
1657	 65.34	0	1771861..1772388	-	175	37521226	-	gll1657	-	hypothetical protein
1658	 70.03	+1	1772385..1773098	-	237	37521227	pyrF	gvip232	-	orotidine 5'-phosphate decarboxylase
1659	 66.33	0	1773098..1773688	-	196	37521228	-	gll1659	-	hypothetical protein
1660	 59.09	0	1773813..1774841	+	342	37521229	-	glr1660	-	bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase
1661	 63.45	0	1774860..1776260	-	466	37521230	-	gll1661	-	two-component sensor histidine kinase
1662	 63.68	0	1776263..1777669	-	468	37521231	-	gll1662	-	two-component sensor histidine kinase
1663	 63.47	0	1777752..1778657	-	301	37521232	-	gll1663	-	metalloprotease MEP1-like protein
1664	 57.99	0	1778787..1779155	+	122	37521233	-	glr1664	-	hypothetical protein
1665	 62.88	0	1779159..1779686	+	175	37521234	-	glr1665	-	hypothetical protein
1666	 62.08	0	1779627..1781042	-	471	37521235	-	gll1666	-	amino acid transporter
1667	 59.92	0	1781107..1781358	-	83	37521236	-	gsl1667	-	hypothetical protein
1668	 61.02	0	1781567..1782895	-	442	37521237	-	gll1668	-	signal transducer AmpG-like protein
1669	 53.10	-1	1782902..1783336	-	144	37521238	-	gll1669	-	hypothetical protein
1670	 49.51	-2	1783333..1783641	-	102	37521239	-	gll1670	-	hypothetical protein
1671	 67.32	+1	1783672..1784745	-	357	37521240	-	gll1671	-	UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
1672	 61.83	0	1784867..1786168	+	433	37521241	-	glr1672	-	hypothetical protein
1673	 63.10	0	1786241..1787812	+	523	37521242	-	glr1673	-	hypothetical protein
1674	 60.58	0	1787796..1788863	-	355	37521243	-	gll1674	-	hypothetical protein
1675	 59.56	0	1789035..1789583	+	182	37521244	-	glr1675	-	hypothetical protein
1676	 65.15	0	1789709..1791286	-	525	37521245	dnaK	gvip233	-	DnaK-type molecular chaperone
1677	 64.26	0	1791450..1791698	+	82	37521246	-	gsr1677	-	hypothetical protein
1678	 58.99	0	1791695..1792111	+	138	37521247	-	glr1678	-	plasmid stabilization protein StbB-like protein
1679	 61.63	0	1792124..1792540	-	138	37521248	-	gll1679	-	hypothetical protein
1680	 61.67	0	1792537..1792776	-	79	37521249	-	gsl1680	-	hypothetical protein
1681	 68.29	+1	1792898..1793947	+	349	37521250	-	glr1681	-	hypothetical protein
1682	 65.50	0	1793944..1794798	+	284	37521251	-	glr1682	-	hydratase
1683	 63.35	0	1795322..1795954	-	210	37521252	-	gll1683	-	two-component response regulator
1684	 59.12	0	1796124..1796534	+	136	37521253	-	glr1684	-	two-component response regulator
1685	 65.74	0	1796531..1797823	-	430	37521254	-	gll1685	-	hypothetical protein
1686	 67.47	+1	1797837..1799198	-	453	37521255	-	gll1686	-	two-component sensor histidine kinase
1687	 65.59	0	1799308..1799772	+	154	37521256	-	glr1687	-	hypothetical protein
1688	 63.23	0	1799976..1800440	-	154	37521257	-	gll1688	-	ribose 5-phosphate epimerase
1689	 62.85	0	1800569..1801564	+	331	37521258	-	glr1689	-	hypothetical protein
1690	 58.90	0	1802065..1802283	+	72	37521259	-	gsr1690	-	hypothetical protein
1691	 59.81	0	1802280..1802600	+	106	37521260	-	glr1691	-	hypothetical protein
1692	 62.60	0	1802608..1804254	-	548	37521261	pgi	gll1692	-	glucose-6-phosphate isomerase
1693	 65.02	0	1804405..1805253	-	282	37521262	-	gll1693	-	ABC transporter permease protein
1694	 64.43	0	1805293..1806588	+	431	37521263	-	glr1694	-	ABC transporter solute-binding protein
1695	 60.64	0	1806268..1806549	-	93	37521264	-	gsl1695	-	hypothetical protein
1696	 51.93	-2	1806622..1807062	-	146	37521265	-	gll1696	-	hypothetical protein
1697	 50.46	-2	1807052..1807378	-	108	37521266	-	gll1697	-	hypothetical protein
1698	 60.00	0	1807519..1807923	+	134	37521267	-	glr1698	-	hypothetical protein
1699	 66.10	0	1808024..1808728	+	234	37521268	-	glr1699	-	protein-L-isoaspartate O-methyltransferase
1700	 66.38	0	1808826..1809872	-	348	37521269	-	gll1700	-	hypothetical protein
1701	 63.75	0	1809891..1810643	+	250	37521270	-	glr1701	-	hypothetical protein
1702	 61.42	0	1810644..1811348	-	234	37521271	-	gll1702	-	glutathione S-transferase
1703	 63.84	0	1811597..1813789	-	730	37521272	-	gll1703	-	peptidase
1704	 65.41	0	1813893..1815002	-	369	37521273	-	gll1704	-	hypothetical protein
1705	 65.90	0	1815209..1815994	+	261	37521274	-	glr1705	-	hypothetical protein
1706	 58.82	0	1816423..1817505	+	360	37521275	psbA	gvip234	-	photosystem II protein D1
1707	 59.05	0	1817545..1818240	+	231	37521276	-	glr1707	-	hypothetical protein
1708	 55.48	-1	1818253..1818690	-	145	37521277	-	gll1708	-	hypothetical protein
1709	 53.49	-1	1818687..1818944	-	85	37521278	-	gsl1709	-	hypothetical protein
1710	 48.95	-2	1819485..1820432	+	315	37521279	-	glr1710	-	hypothetical protein
1711	 44.74	-2	1820508..1820849	+	113	37521280	-	glr1711	-	hypothetical protein
1712	 65.01	0	1820938..1822083	-	381	37521281	-	gll1712	-	hypothetical protein
1713	 63.68	0	1822189..1823730	+	513	37521282	-	glr1713	-	hypothetical protein
1714	 63.88	0	1823793..1824869	+	358	37521283	chlI	gvip235	-	magnesium protoporphyrin IX chelatase subunit I
1715	 65.24	0	1825103..1825735	+	210	37521284	-	glr1715	-	hypothetical protein
1716	 61.11	0	1825860..1826129	-	89	37521285	-	gsl1716	-	YciI-like protein
1717	 64.96	0	1826186..1827712	+	508	37521286	trpE	gvip236	-	anthranilate synthase component I
62.08	MEAN

4.75	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.