IslandPath Analysis: Gloeobacter violaceus PCC 7421



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.08   STD DEV: 4.75
Gloeobacter violaceus PCC 7421, complete genome - 1..4659019
4430 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1429	 62.34	0	1533926..1534480	+	184	37520998	-	glr1429	-	hypothetical protein
1430	 67.21	+1	1534521..1535624	+	367	37520999	-	glr1430	-	mannosyltransferase
1431	 59.69	0	1535661..1537394	-	577	37521000	-	gll1431	-	alpha-glucanotransferase
1432	 67.21	+1	1537501..1538427	-	308	37521001	dnaX	gvip200	-	DNA polymerase III subunit delta'
1433	 59.71	0	1538424..1538768	-	114	37521002	-	gll1433	-	hypothetical protein
1434	 58.24	0	1538798..1539070	-	90	37521003	-	gsl1434	-	hypothetical protein
1435	 64.35	0	1539098..1540045	-	315	37521004	-	gll1435	-	proline iminopeptidase
1436	 61.82	0	1540188..1540703	-	171	37521005	-	gll1436	-	hypothetical protein
1437	 68.10	+1	1540710..1541057	-	115	37521006	-	gll1437	-	transcription regulator ArsR
1438	 58.62	0	1541613..1542221	-	202	37521007	-	gll1438	-	hypothetical protein
1439	 63.76	0	1542251..1543144	+	297	37521008	-	glr1439	-	hypothetical protein
1440	 63.10	0	1543282..1543869	-	195	37521009	psbP	gvip201	-	hypothetical protein
1441	 65.56	0	1543939..1544301	+	120	37521010	-	glr1441	-	hypothetical protein
1442	 65.86	0	1544264..1545376	-	370	37521011	uvrC	gvip202	-	excinuclease ABC subunit C
1443	 59.12	0	1545463..1545621	-	52	37521012	-	gsl1443	-	CAB/ELIP/HLIP-related protein
1444	 67.40	+1	1545757..1547121	+	454	37521013	-	glr1444	-	hypothetical protein
1445	 65.43	0	1547118..1548326	-	402	37521014	-	gll1445	-	hypothetical protein
1446	 55.56	-1	1548691..1549563	+	290	37521015	glyQ	gvip203	-	glycyl-tRNA synthetase subunit alpha
1447	 56.89	-1	1549589..1550161	+	190	37521016	-	glr1447	-	hypothetical protein
1448	 66.62	0	1550178..1552286	-	702	37521017	-	gll1448	-	hypothetical protein
1449	 68.04	+1	1552387..1553844	+	485	37521018	-	glr1449	-	hypothetical protein
1450	 64.80	0	1553936..1555645	-	569	37521019	-	gll1450	-	hypothetical protein
1451	 68.32	+1	1555630..1556172	-	180	37521020	-	gll1451	-	hypothetical protein
1452	 62.98	0	1556340..1558673	-	777	37521021	-	gll1452	-	hypothetical protein
1453	 67.41	+1	1558732..1560480	-	582	37521022	-	gll1453	-	poly A polymerase
1454	 68.12	+1	1560414..1561373	-	319	37521023	-	gll1454	-	hypothetical protein
1455	 64.80	0	1561401..1561829	-	142	37521024	-	gll1455	-	hypothetical protein
1456	 66.20	0	1561833..1562909	-	358	37521025	-	gll1456	-	putative oxidoreductase
1457	 65.60	0	1563061..1564470	+	469	37521026	aspA	glr1457	-	aspartate ammonia-lyase
1458	 60.72	0	1564459..1564929	-	156	37521027	-	gll1458	-	hypothetical protein
1459	 62.16	0	1564951..1565727	+	258	37521028	-	glr1459	-	hypothetical protein
1460	 60.75	0	1565783..1566661	+	292	37521029	-	glr1460	-	hypothetical protein
1461	 62.02	0	1566662..1567048	+	128	37521030	-	glr1461	-	methyltransferase
1462	 60.32	0	1566924..1567742	-	272	37521031	-	gll1462	-	circadian phase modifier CpmA-like protein
1463	 63.82	0	1572926..1574014	-	362	37521032	thrC	gvip204	-	threonine synthase
1464	 65.52	0	1574052..1575011	-	319	37521033	-	gll1464	-	hypothetical protein
1465	 64.38	0	1575013..1575492	+	159	37521034	-	glr1465	-	deoxyuridine 5'triphosphate nucleotidohydrolase
1466	 57.66	0	1575637..1575858	+	73	37521035	-	gsr1466	-	hypothetical protein
1467	 64.83	0	1575988..1577019	+	343	37521036	-	glr1467	-	cell-shape determining protein MreB-like protein
1468	 62.03	0	1577027..1578664	-	545	37521037	-	gll1468	-	hypothetical protein
1469	 55.90	-1	1578812..1579099	-	95	37521038	-	gsl1469	-	hypothetical protein
1470	 59.78	0	1579296..1581212	-	638	37521039	-	gll1470	-	peptidase
1471	 65.90	0	1581235..1582803	-	522	37521040	-	gll1471	-	hypothetical protein
1472	 63.90	0	1582892..1583758	+	288	37521041	-	glr1472	-	hypothetical protein
1473	 56.88	-1	1583759..1585087	-	442	37521042	dnaA	gvip205	-	chromosomal replication initiation protein
1474	 69.63	+1	1585349..1585483	+	44	37521043	rpmH	gvip206	-	50S ribosomal protein L34
1475	 59.94	0	1585535..1585861	+	108	37521044	rnpA	gvip207	-	ribonuclease P protein component
1476	 57.62	0	1585851..1586270	+	139	37521045	-	glr1476	-	hypothetical protein
1477	 62.49	0	1586273..1587277	-	334	37521046	-	gll1477	-	hypothetical protein
1478	 60.84	0	1587381..1587809	+	142	37521047	-	glr1478	-	hypothetical protein
1479	 60.38	0	1587806..1590493	+	895	37521048	-	glr1479	-	hypothetical protein
1480	 63.17	0	1590575..1591660	+	361	37521049	-	glr1480	-	hypothetical protein
1481	 62.61	0	1591686..1592129	+	147	37521050	-	glr1481	-	hypothetical protein
1482	 64.08	0	1592225..1593655	+	476	37521051	-	glr1482	-	hypothetical protein
1483	 66.97	+1	1593687..1594340	-	217	37521052	-	gll1483	-	methyltransferase
1484	 55.40	-1	1594422..1594856	+	144	37521053	-	glr1484	-	hypothetical protein
1485	 54.39	-1	1594901..1595128	+	75	37521054	-	gsr1485	-	ferredoxin like protein
1486	 61.97	0	1595150..1596406	+	418	37521055	-	glr1486	-	rod-shape-determining protein MrdB-like protein
1487	 66.67	0	1596412..1596765	+	117	37521056	-	glr1487	-	dihydroneopterin aldolase
1488	 65.43	0	1596824..1599244	+	806	37521057	-	glr1488	-	hypothetical protein
1489	 44.37	-2	1599876..1601189	-	437	37521058	-	gll1489	-	hypothetical protein
1490	 64.74	0	1601297..1602487	-	396	37521059	-	gll1490	-	tetracycline resistance protein
1491	 66.07	0	1602511..1604703	+	730	37521060	-	glr1491	-	penicillin-binding protein
1492	 62.72	0	1604781..1605566	+	261	37521061	-	glr1492	-	hypothetical protein
1493	 65.84	0	1605576..1607384	-	602	37521062	-	gll1493	-	two-component sensor histidine kinase
1494	 60.35	0	1607520..1607978	-	152	37521063	smpB	gll1494	-	SsrA-binding protein
1495	 68.14	+1	1608188..1608526	-	112	37521064	-	gll1495	-	hypothetical protein
1496	 68.67	+1	1608749..1609546	-	265	37521065	-	gll1496	-	glutamate racemase
1497	 60.86	0	1609611..1610075	-	154	37521066	-	gll1497	-	hypothetical protein
1498	 63.49	0	1610185..1610625	-	146	37521067	-	gll1498	-	hypothetical protein
1499	 66.07	0	1610679..1612019	-	446	37521068	-	gll1499	-	hypothetical protein
1500	 60.56	0	1611961..1612812	+	283	37521069	-	glr1500	-	hypothetical protein
1501	 62.03	0	1612816..1614906	-	696	37521070	-	gll1501	-	polyphosphate kinase
1502	 64.55	0	1615097..1616230	+	377	37521071	-	glr1502	-	hypothetical protein
1503	 60.65	0	1616288..1617367	-	359	37521072	-	gll1503	-	hypothetical protein
1504	 63.74	0	1617698..1619236	-	512	37521073	-	gll1504	-	aldehyde dehydrogenase
1505	 65.02	0	1619374..1619919	-	181	37521074	rimM	gll1505	-	16S rRNA-processing protein
1506	 66.67	0	1620272..1622260	+	662	37521075	rne	gvip208	-	ribonuclease E
1507	 68.34	+1	1622346..1622942	+	198	37521076	rnhA	gvip209	-	ribonuclease H
1508	 64.82	0	1623084..1627688	+	1534	37521077	glsF	gvip210	-	ferredoxin-dependent glutamate synthase
1509	 58.11	0	1627753..1628418	-	221	37521078	-	gll1509	-	hypothetical protein
1510	 59.23	0	1628393..1629064	+	223	37521079	-	glr1510	-	MerR family transcriptional regulator
1511	 66.17	0	1629061..1629867	+	268	37521080	-	glr1511	-	phosphomethylpyrimidine kinase
1512	 59.50	0	1629998..1630681	-	227	37521081	-	gll1512	-	hypothetical protein
1513	 59.19	0	1630847..1631608	-	253	37521082	-	gll1513	-	hypothetical protein
1514	 67.36	+1	1631738..1632604	-	288	37521083	-	gll1514	-	hypothetical protein
1515	 63.86	0	1632666..1633271	-	201	37521084	-	gll1515	-	hypothetical protein
1516	 64.52	0	1633372..1634721	+	449	37521085	-	glr1516	-	hypothetical protein
1517	 65.43	0	1634725..1636017	+	430	37521086	-	glr1517	-	hypothetical protein
1518	 65.08	0	1636041..1637363	+	440	37521087	-	glr1518	-	hypothetical protein
1519	 62.15	0	1637424..1638065	+	213	37521088	-	glr1519	-	hypothetical protein
1520	 61.19	0	1638157..1639965	-	602	37521089	-	gll1520	-	GTP-binding protein
1521	 63.79	0	1640050..1640397	-	115	37521090	-	gll1521	-	ferredoxin like protein
1522	 57.50	0	1640525..1640884	+	119	37521091	-	glr1522	-	hypothetical protein
1523	 58.06	0	1640963..1641613	+	216	37521092	-	glr1523	-	hypothetical protein
1524	 63.21	0	1641821..1643470	+	549	37521093	pyrG	gvip211	-	CTP synthetase
1525	 67.50	+1	1643583..1645028	+	481	37521094	-	glr1525	-	hypothetical protein
1526	 65.69	0	1645041..1646171	+	376	37521095	-	glr1526	-	glycosyltransferase
1527	 62.21	0	1646312..1648285	+	657	37521096	-	glr1527	-	hypothetical protein
1528	 64.29	0	1648275..1649744	-	489	37521097	gatA	gll1528	-	aspartyl/glutamyl-tRNA amidotransferase subunit A
62.08	MEAN

4.75	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.