IslandPath Analysis: Gloeobacter violaceus PCC 7421



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 62.08   STD DEV: 4.75
Gloeobacter violaceus PCC 7421, complete genome - 1..4659019
4430 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
70	 63.39	0	71182..71517	-	111	37519639	-	gll0070	-	hypothetical protein
71	 66.67	0	71624..72922	+	432	37519640	hemL	gvip005	-	glutamate-1-semialdehyde aminotransferase
72	 64.75	0	72977..73498	+	173	37519641	lspA	glr0072	-	lipoprotein signal peptidase
73	 68.81	+1	73503..74435	+	310	37519642	-	glr0073	-	pseudouridine synthase
74	 62.47	0	74440..75273	-	277	37519643	-	gll0074	-	hypothetical protein
75	 55.04	-1	75452..76285	+	277	37519644	-	glr0075	-	sugar-non-specific nuclease NucA-like protein
76	 57.55	0	76474..76791	+	105	37519645	-	glr0076	-	putative transposase
77	 51.67	-2	76791..77657	+	288	37519646	-	glr0077	-	putative transposase
78	 62.79	0	78023..78409	+	128	37519647	-	glr0078	-	hypothetical protein
79	 58.73	0	78478..79044	+	188	37519648	ycf4	gvip006	-	photosystem I assembly protein Ycf4
80	 63.83	0	79162..82194	+	1010	37519649	-	glr0080	-	putative alpha-mannosidase
81	 63.13	0	82256..82849	+	197	37519650	-	glr0081	-	hypothetical protein
82	 61.88	0	82929..84077	-	382	37519651	-	gll0082	-	glycosyltransferase
83	 61.69	0	84082..85326	-	414	37519652	-	gll0083	-	hypothetical protein
84	 65.27	0	85344..86129	-	261	37519653	recO	gll0084	-	DNA repair protein RecO
85	 66.05	0	86307..86954	+	215	37519654	rplC	gvip007	-	50S ribosomal protein L3
86	 63.71	0	86987..87628	+	213	37519655	rplD	gvip008	-	50S ribosomal protein L4
87	 59.08	0	87625..87927	+	100	37519656	rplW	gvip009	-	50S ribosomal protein L23
88	 63.54	0	88105..88680	+	191	37519657	-	glr0088	-	hypothetical protein
89	 62.22	0	88677..89216	-	179	37519658	-	gll0089	-	hypothetical protein
90	 59.87	0	89381..89851	+	156	37519659	-	glr0090	-	hypothetical protein
91	 64.86	0	89856..90407	-	183	37519660	-	gll0091	-	hypothetical protein
92	 65.42	0	90488..90808	+	106	37519661	-	glr0092	-	hypothetical protein
93	 66.81	0	90820..92208	+	462	37519662	-	glr0093	-	aminopeptidase P
94	 60.05	0	92607..94766	+	719	37519663	-	glr0094	-	hypothetical protein
95	 56.67	-1	94907..95146	+	79	37519664	-	gsr0095	-	cell growth regulatory protein
96	 53.27	-1	95140..95475	+	111	37519665	-	glr0096	-	cell growth regulatory protein
97	 58.02	0	95612..96085	-	157	37519666	-	gll0097	-	hypothetical protein
98	 60.50	0	96173..97906	+	577	37519667	-	glr0098	-	ABC transporter ATP-binding protein
99	 67.73	+1	97911..100268	-	785	37519668	-	gll0099	-	two-component hybrid sensor and regulator
100	 58.65	0	100300..101559	-	419	37519669	-	gll0100	-	hypothetical protein
101	 68.00	+1	101535..101984	-	149	37519670	-	gll0101	-	hypothetical protein
102	 64.25	0	102033..102941	-	302	37519671	-	gll0102	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
103	 64.44	0	102938..103657	-	239	37519672	pdxJ	gvip010	-	pyridoxal phosphate biosynthetic protein PdxJ
104	 59.34	0	103788..104183	+	131	37519673	-	glr0104	-	hypothetical protein
105	 57.47	0	104307..104567	+	86	37519674	-	gsr0105	-	hypothetical protein
106	 55.62	-1	104645..105133	-	162	37519675	ycf52	gvip011	-	hypothetical protein
107	 57.68	0	105182..105448	+	88	37519676	-	gsr0107	-	hypothetical protein
108	 61.07	0	105491..106240	-	249	37519677	-	gll0108	-	undecaprenyl pyrophosphate synthetase
109	 60.54	0	106245..107126	-	293	37519678	-	gll0109	-	hypothetical protein
110	 62.02	0	107123..108457	-	444	37519679	lysA	gvip012	-	diaminopimelate decarboxylase
111	 68.07	+1	108590..109516	+	308	37519680	-	glr0111	-	ADP-ribosylglycohydrolase
112	 44.22	-2	109702..110904	+	400	37519681	-	glr0112	-	hypothetical protein
113	 66.67	0	111447..111665	+	72	37519682	-	gsr0113	-	hypothetical protein
114	 65.77	0	111838..112395	-	185	37519683	-	gll0114	-	hypothetical protein
115	 64.03	0	112414..113133	-	239	37519684	-	gll0115	-	short chain oxidoreductase
116	 62.84	0	113268..114104	+	278	37519685	-	glr0116	-	hypothetical protein
117	 62.62	0	114108..115565	-	485	37519686	-	gll0117	-	cyanophycinase
118	 59.13	0	115630..115974	-	114	37519687	-	gll0118	-	hypothetical protein
119	 63.17	0	116079..117365	-	428	37519688	-	gll0119	-	carboxyl-terminal protease
120	 60.64	0	117549..117830	+	93	37519689	-	gsr0120	-	hypothetical protein
121	 61.64	0	117922..118935	+	337	37519690	-	glr0121	-	hypothetical protein
122	 67.35	+1	119016..119891	+	291	37519691	-	glr0122	-	hypothetical protein
123	 62.88	0	119842..120897	-	351	37519692	cobW	gvip013	-	cobalamin synthesis protein cobW-like protein
124	 64.61	0	121048..121533	+	161	37519693	-	glr0124	-	hypothetical protein
125	 50.22	-2	121637..121867	+	76	37519694	-	gsr0125	-	hypothetical protein
126	 44.25	-2	121845..122192	+	115	37519695	-	glr0126	-	hypothetical protein
127	 64.90	0	122286..122966	-	226	37519696	ubiE	gvip014	-	ubiquinone/menaquinone biosynthesis methyltransferase
128	 68.23	+1	122966..123541	-	191	37519697	-	gll0128	-	molybdopterin-guanine dinucleotide biosynthesis protein A
129	 59.45	0	123820..125856	+	678	37519698	-	glr0129	-	oligopeptidase
130	 64.60	0	126121..126990	-	289	37519699	-	gll0130	-	ABC transporter solute-binding protein
131	 66.67	0	127010..127699	-	229	37519700	-	gll0131	-	hypothetical protein
132	 60.11	0	127839..128189	-	116	37519701	-	gll0132	-	hypothetical protein
133	 56.95	-1	128334..128786	-	150	37519702	-	gll0133	-	hypothetical protein
134	 57.94	0	128938..129441	+	167	37519703	-	glr0134	-	hypothetical protein
135	 63.84	0	129703..130410	+	235	37519704	-	glr0135	-	hypothetical protein
136	 59.19	0	130561..131202	+	213	37519705	-	glr0136	-	hypothetical protein
137	 62.77	0	131296..132090	+	264	37519706	-	glr0137	-	hypothetical protein
138	 65.67	0	132087..133190	+	367	37519707	-	glr0138	-	hypothetical protein
139	 62.28	0	133435..134118	-	227	37519708	-	gll0139	-	hypothetical protein
140	 64.48	0	134219..134995	+	258	37519709	-	glr0140	-	exodeoxyribonuclease III
141	 61.20	0	135008..135190	-	60	37519710	-	gsl0141	-	hypothetical protein
142	 62.02	0	135303..135689	-	128	37519711	-	gll0142	-	hypothetical protein
143	 62.24	0	135699..136217	-	172	37519712	-	gll0143	-	transcriptional regulator NrdR
144	 59.86	0	136227..136667	-	146	37519713	-	gll0144	-	hypothetical protein
145	 64.31	0	136652..137161	-	169	37519714	-	gll0145	-	hypothetical protein
146	 65.10	0	137192..138595	+	467	37519715	-	glr0146	-	putative transposase
147	 63.50	0	138540..139265	-	241	37519716	-	gll0147	-	hypothetical protein
148	 65.78	0	139525..139863	+	112	37519717	-	glr0148	-	hypothetical protein
149	 65.65	0	139924..140511	+	195	37519718	-	glr0149	-	ParA family chromosome partitioning ATPase
150	 56.62	-1	140569..141444	+	291	37519719	-	glr0150	-	putative transposase
151	 62.59	0	141822..143390	-	522	37519720	-	gll0151	-	putative transposase
152	 48.10	-2	143605..144051	-	148	37519721	-	gll0152	-	hypothetical protein
153	 58.98	0	144410..147442	+	1010	37519722	-	glr0153	-	hypothetical protein
154	 62.91	0	147765..148163	+	132	37519723	-	glr0154	-	hypothetical protein
155	 56.62	-1	148237..149112	+	291	37519724	-	glr0155	-	putative transposase
156	 65.48	0	149272..149946	+	224	37519725	-	glr0156	-	hypothetical protein
157	 60.08	0	149691..150434	-	247	37519726	-	gll0157	-	hypothetical protein
158	 64.25	0	150634..152166	-	510	37519727	-	gll0158	-	hypothetical protein
159	 65.48	0	152222..154165	-	647	37519728	-	gll0159	-	acetyl-coenzyme A synthetase
160	 60.52	0	154170..154478	-	102	37519729	rpsT	gvip015	-	30S ribosomal protein S20
161	 60.00	0	154621..154890	+	89	37519730	-	gsr0161	-	hypothetical protein
162	 65.54	0	155006..157126	+	706	37519731	-	glr0162	-	penicillin-binding protein
163	 61.30	0	157153..157506	+	117	37519732	-	glr0163	-	putative translation initiaiton factor
164	 60.82	0	157512..157802	+	96	37519733	-	gsr0164	-	hypothetical protein
165	 60.59	0	157811..158353	+	180	37519734	-	glr0165	-	hypothetical protein
166	 58.90	0	158496..158714	+	72	37519735	-	gsr0166	-	hypothetical protein
167	 52.67	-1	158895..159194	-	99	37519736	-	gsl0167	-	hypothetical protein
168	 57.61	0	159191..159466	-	91	37519737	-	gsl0168	-	hypothetical protein
169	 65.01	0	159622..160164	-	180	37519738	-	gll0169	-	hypothetical protein
62.08	MEAN

4.75	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.