version 1.0
Gluconacetobacter diazotrophicus PAl 5, complete genome - 1..3944163 3778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 397 70.27 0 415134..416603 - 489 162146243 gabD GDI0418 - putative succinate-semialdehyde dehydrogenase 398 64.22 0 416784..419234 - 816 162146244 - GDI0419 - putative TonB-dependent receptor 399 67.04 0 419462..420538 - 358 162146245 - GDI0420 - putative tartrate dehydrogenase/decarboxylase 400 64.81 0 420643..420804 - 53 162146246 - GDI0421 - hypothetical protein 401 59.19 -1 420817..421311 + 164 162146247 - GDI0422 - AsnC family transcriptional regulator 402 70.15 0 421483..422916 + 477 162146248 - GDI0423 - putative aminotransferase 403 67.94 0 422874..424283 - 469 162146249 rpoN GDI0424 - RNA polymerase sigma-54 factor 1 404 68.63 0 424280..425044 - 254 162146250 modC GDI0425 - putative molybdenum import ATP-binding protein modC 405 67.25 0 425041..425727 - 228 162146251 modB GDI0426 - putative molybdenum transport system permease protein modB 406 69.58 0 425724..426512 - 262 162146252 modA GDI0427 - putative molybdate-binding periplasmic protein precursor 407 68.87 0 426702..427292 + 196 162146253 - GDI0428 - hypothetical protein 408 66.49 0 427533..429278 + 581 162146254 nifA GDI0429 - Nif-specific regulatory protein 409 62.86 0 429434..430906 + 490 162146255 nifB GDI0430 - putative FeMo cofactor biosynthesis protein nifB 410 60.00 -1 430943..431137 + 64 162146256 fdxN GDI0431 - putative ferredoxin-like 411 70.26 0 431181..431987 + 268 162146257 - GDI0432 - hypothetical protein 412 61.65 0 431971..432249 + 92 162146258 nifZ GDI0433 - putative nifZ protein 413 62.96 0 432246..432461 + 71 162146259 fixU GDI0434 - putative fixU protein 414 68.84 0 432458..433285 + 275 162146260 - GDI0435 - hypothetical protein 415 62.54 0 433531..434427 + 298 162146261 nifH GDI0436 - nitrogenase reductase 416 59.07 -1 434493..435992 + 499 162146262 nifD GDI0437 - FeMo protein of nitrogenase alpha subunit; NifD 417 60.94 0 436057..437592 + 511 162146263 nifK GDI0438 - nitrogenase FeMo beta subunit protein; NifK 418 65.14 0 437663..439102 + 479 162146264 nifE GDI0439 - nitrogenase iron-molybdenum cofactor biosynthesis protein nifE 419 67.38 0 439114..440511 + 465 162146265 nifN GDI0440 - nitrogenase iron-molybdenum cofactor biosynthesis protein nifN 420 67.47 0 440483..440977 + 164 162146266 nifX GDI0441 - protein nifX 421 63.85 0 440980..441441 + 153 162146267 - GDI0442 - hypothetical protein 422 62.86 0 441453..441662 + 69 162146268 - GDI0443 - hypothetical protein 423 70.53 0 441667..441951 + 94 162146269 fdxB GDI0444 - putative ferredoxin protein 424 67.31 0 441970..442587 + 205 162146270 nifQ GDI0445 - protein nifQ 425 60.12 -1 442813..443133 + 106 162146271 hesB GDI0446 - putative hesB protein 426 66.24 0 443175..444104 + 309 162146272 nifU GDI0447 - nitrogen fixation protein nifU 427 66.25 0 444118..445320 + 400 162146273 nifS GDI0448 - cysteine desulfurase 428 70.09 0 445368..446507 + 379 162146274 nifV GDI0449 - homocitrate synthase 429 66.05 0 446527..446850 + 107 162146275 nifW GDI0450 - nitrogenase-stabilizing/protective protein nifW 430 66.90 0 447003..447857 + 284 162146276 fixA GDI0451 - protein fixA 431 67.40 0 447871..448965 + 364 162146277 fixB GDI0452 - hypothetical protein 432 63.23 0 448976..450256 + 426 162146278 fixC GDI0453 - protein fixC 433 59.65 -1 450285..450569 + 94 162146279 fixX GDI0454 - ferredoxin-like protein 434 71.78 0 450607..451428 + 273 162146280 modD GDI0455 - putative pyrophosphorylase modD 435 64.29 0 451802..453397 + 531 162146281 mcpA GDI0456 - chemoreceptor mcpA 436 66.36 0 453534..454514 + 326 162146282 - GDI0457 - oxidoreductase (aldo/keto reductase) protein 437 70.29 0 454536..455861 - 441 162146283 agaE GDI0458 - putative deaminase 438 62.78 0 456130..456798 + 222 162146284 - GDI0459 - putative haloalkanoic acid dehalogenase 439 66.12 0 456810..458081 + 423 162146285 - GDI0460 - putative oxidoreductase 440 67.42 0 458122..459585 - 487 162146286 aldA GDI0461 - putative aldehyde dehydrogenase 441 68.64 0 459620..460837 - 405 162146287 argE GDI0462 - acetylornithine deacetylase 442 65.90 0 460848..462536 + 562 162146288 - GDI0463 - putative extracellular solute-binding protein 443 68.11 0 462533..463504 + 323 162146289 - GDI0464 - putative ABC transporter, permease protein 444 69.30 0 463501..464373 + 290 162146290 - GDI0465 - putative ABC transporter, permease protein 445 70.70 0 464370..466181 + 603 162146291 - GDI0466 - putative ABC transporter, ATP-binding protein 446 74.07 +1 466263..467369 + 368 162146292 katE GDI0467 - putative catalase 447 70.31 0 467366..467941 + 191 162146293 cybB GDI0468 - putative cytochrome protein 448 69.77 0 467944..468813 + 289 162146294 - GDI0469 - putative pirin-like protein 449 70.56 0 468869..469999 + 376 162146295 ada GDI0470 - putative regulatory protein ada (regulatory protein of adaptative response) 450 67.91 0 470113..471000 + 295 162146296 - GDI0471 - hypothetical protein 451 68.10 0 471017..471295 - 92 162146297 - GDI0472 - putative protease 452 66.09 0 471444..471791 + 115 162146298 - GDI0473 - hypothetical protein 453 68.85 0 471871..472374 + 167 162146299 - GDI0474 - putative transcription regulator 454 65.90 0 472374..473153 + 259 162146300 speE GDI0475 - putative spermidine synthase 455 63.53 0 473739..475493 + 584 162146301 lsdA GDI0476 - levansucrase precursor protein 456 67.60 0 475544..477148 + 534 162146302 lsdB GDI0477 - levanase precursor 457 64.25 0 477184..477597 - 137 162146303 bfpH GDI0478 - putative BfpH protein (involved in biogenesis of type IV pili) 458 64.24 0 477651..478145 + 164 162146304 - GDI0479 - putative pseudopilin G precursor 459 73.28 +1 478157..478942 + 261 162146305 gspO GDI0480 - putative prepilin peptidase and N-methyltransferase O 460 69.66 0 478965..480668 + 567 162146306 - GDI0481 - putative type II secretion pathway kinase GspE 461 73.66 +1 480672..481901 + 409 162146307 lsdF GDI0482 - putative general secretion pathway protein F 462 71.16 0 481891..482313 + 140 162146308 lsdH GDI0483 - putative pseudopilin H precursor 463 70.12 0 482310..482714 + 134 162146309 lsdI GDI0484 - putative pseudopilin I precursor 464 70.77 0 482711..483319 + 202 162146310 lsdJ GDI0485 - putative pseudopilin J precursor 465 72.59 +1 483393..484439 + 348 162146311 lsdL GDI0486 - putative general secretion pathway protein L 466 70.14 0 484442..485074 + 210 162146312 lsdM GDI0487 - putative general secretion pathway protein M 467 72.93 +1 485071..485565 + 164 162146313 lsdN GDI0488 - putative general secretion pathway protein N 468 68.22 0 485562..487880 + 772 162146314 lsdD GDI0489 - putative general secretion pathway protein D 469 71.98 0 487877..488686 + 269 162146315 lsdK GDI0490 - putative general secretion pathway protein K 470 63.44 0 488736..489665 - 309 162146316 fbaB GDI0491 - fructose-1,6-bisphosphate aldolase 471 69.03 0 489798..490178 - 126 162146317 - GDI0492 - hypothetical protein 472 69.12 0 490175..491395 - 406 162146318 - GDI0493 - putative flavohemoprotein 473 68.71 0 491462..491902 + 146 162146319 - GDI0494 - putative transcriptional regulator 474 68.13 0 491851..493083 - 410 162146320 - GDI0495 - putative glycosyl transferase 475 65.87 0 493080..493205 - 41 162146321 - GDI0496 - hypothetical protein 476 63.69 0 493517..494155 + 212 162146322 - GDI0497 - putative peptidase 477 66.86 0 494174..495193 - 339 162146323 - GDI0498 - putative glycosyl transferase 478 67.01 0 495209..496654 - 481 162146324 - GDI0499 - hypothetical protein 479 70.12 0 496916..498103 + 395 162146325 - GDI0500 - putative glycosyl transferase 480 63.85 0 498154..499146 + 330 162146326 - GDI0501 - radical SAM superfamily protein 481 69.01 0 499183..500505 - 440 162146327 - GDI0502 - hypothetical protein 482 66.77 0 500519..501499 - 326 162146328 - GDI0503 - hypothetical protein 483 69.70 0 501515..502603 - 362 162146329 - GDI0504 - putative MotA/TolQ/ExbB proton channel family protein 484 76.62 +1 502600..503403 - 267 162146330 - GDI0505 - hypothetical protein 485 69.86 0 503469..504281 - 270 162146331 suhB GDI0506 - inositol-1-monophosphatase 486 64.55 0 504361..504927 - 188 162146332 efp GDI0507 - elongation factor P 487 72.58 +1 504986..506134 - 382 162146333 - GDI0508 - putative L-lysine 2,3-aminomutase 488 70.77 0 506182..507204 + 340 162146334 poxA GDI0509 - putative lysyl-tRNA synthetase 489 70.11 0 507301..507735 + 144 162146335 - GDI0510 - hypothetical protein 490 73.13 +1 507765..508445 + 226 162146336 - GDI0511 - putative cell adhesion 491 71.99 0 508467..509105 - 212 162146337 thiE GDI0512 - putative thiamine-phosphate pyrophosphorylase 492 73.92 +1 509116..509556 - 146 162146338 - GDI0513 - hypothetical protein 493 71.11 0 509582..509851 + 89 162146339 - GDI0514 - hypothetical protein 494 66.96 0 509855..510196 + 113 162146340 - GDI0515 - putative cell division protein ZapA 495 72.87 +1 510313..510957 + 214 162146341 - GDI0516 - putative 5-formyltetrahydrofolate cyclo-ligase 496 70.10 0 510992..511807 + 271 162146342 - GDI0517 - putative phosphoesterase 66.22 MEAN 5.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0