version 1.0
Gluconacetobacter diazotrophicus PAl 5, complete genome - 1..3944163 3778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2932 56.71 -1 3094170..3095555 - 461 162148778 menE GDI3007 - putative 2-succinylbenzoate--CoA ligase 2933 47.92 -2 3095557..3095796 - 79 162148779 - GDI3008 - hypothetical protein 2934 59.72 -1 3095806..3096438 - 210 162148780 - GDI3009 - acyl-[acyl-carrier-protein]--udp-n-acetylglucosamine o-acyltransferase 2935 57.42 -1 3096449..3097411 - 320 162148781 - GDI3010 - putative transketolase 2936 57.24 -1 3097437..3098189 - 250 162148782 - GDI3011 - putative transketolase 2937 68.56 0 3098376..3099698 - 440 162148783 glyA GDI3012 - Serine hydroxymethyltransferase 2938 66.67 0 3099799..3101346 + 515 162148784 - GDI3013 - putative amino acid permease protein 2939 68.78 0 3101448..3102443 + 331 162148785 hemB GDI3014 - delta-aminolevulinic acid dehydratase 2940 67.18 0 3102645..3103427 + 260 162148786 ate GDI3015 - arginyl-tRNA-protein transferase 2941 67.25 0 3103434..3105665 - 743 162148787 parC GDI3016 - DNA topoisomerase IV subunit A 2942 73.07 +1 3105730..3106494 - 254 162148788 recO GDI3017 - putative DNA repair protein recO 2943 68.96 0 3106544..3107458 - 304 162148789 tst GDI3018 - elongation factor Ts 2944 75.00 +1 3107586..3107717 - 43 162148790 - GDI3019 - hypothetical protein 2945 64.26 0 3107781..3108527 - 248 162148791 rpsB GDI3020 - 30S ribosomal protein S2 2946 69.44 0 3108564..3111992 - 1142 162148792 dnaE GDI3021 - DNA polymerase III subunit alpha 2947 71.85 0 3112002..3112715 - 237 162148793 lolD GDI3022 - putative lipoprotein-releasing system ATP-binding protein lolD 2948 64.82 0 3112708..3113955 - 415 162148794 lolC GDI3023 - putative lipoprotein-releasing system transmembrane protein 2949 66.25 0 3113959..3115389 - 476 162148795 proS GDI3024 - prolyl-tRNA synthetase 2950 68.36 0 3115758..3117410 - 550 162148796 - GDI3025 - RNA-metabolising metallo-beta-lactamase protein 2951 64.66 0 3117459..3117707 + 82 162148797 - GDI3026 - hypothetical protein 2952 69.48 0 3117704..3118486 - 260 162148798 birA GDI3027 - putative biotin--[acetyl-CoA-carboxylase] synthetase 2953 64.43 0 3118483..3119910 - 475 162148799 nouN GDI3028 - putative NADH-quinone oxidoreductase chain N 2954 65.34 0 3119937..3121817 - 626 162148800 nouL GDI3029 - putative NADH-quinone oxidoreductase chain L 2955 59.57 -1 3121885..3122208 - 107 162148801 nouK GDI3030 - putative NADH-quinone oxidoreductase chain K 2956 66.01 0 3122205..3122966 - 253 162148802 nouJ GDI3031 - putative NADH-quinone oxidoreductase chain J 2957 62.78 0 3123081..3123569 - 162 162148803 nouI GDI3032 - NADH dehydrogenase subunit I 2958 63.84 0 3123569..3124594 - 341 162148804 nouH GDI3033 - putative NADH-quinone oxidoreductase chain H 2959 68.94 0 3124601..3126670 - 689 162148805 nouG GDI3034 - NADH dehydrogenase subunit G 2960 65.69 0 3126676..3128001 - 441 162148806 nouF GDI3035 - NADH dehydrogenase I subunit F 2961 66.97 0 3128017..3128676 - 219 162148807 nouE GDI3036 - NADH-quinone oxidoreductase chain E 2962 64.48 0 3128673..3129953 - 426 162148808 nouD GDI3037 - NADH dehydrogenase subunit D 2963 64.64 0 3129961..3130602 - 213 162148809 nouC GDI3038 - NADH-quinone oxidoreductase chain C 2964 65.62 0 3130619..3131194 - 191 162148810 nuoB GDI3039 - NADH dehydrogenase subunit B 2965 59.02 -1 3131217..3131582 - 121 162148811 nouA GDI3040 - putative NADH-ubiquinone oxidoreductase chain 3 2966 62.11 0 3132183..3132467 - 94 162148812 hup GDI3041 - DNA-binding protein HU 2967 65.08 0 3132629..3135142 - 837 162148813 lon GDI3042 - putative ATP-dependent protease La 2968 63.10 0 3135370..3136629 - 419 162148814 clpX GDI3043 - ATP-dependent protease ATP-binding subunit 2969 64.95 0 3136769..3137407 - 212 162148815 clp GDI3044 - ATP-dependent Clp protease proteolytic subunit 2970 66.97 0 3137645..3138982 - 445 162148816 tig GDI3045 - trigger factor 2971 76.20 +1 3139179..3140657 - 492 162148817 - GDI3046 - putative sugar kinase 2972 65.56 0 3140777..3141229 + 150 162148818 - GDI3047 - putative integral membrane protein 2973 66.20 0 3141249..3143378 - 709 162148819 - GDI3048 - puative glycosyl hydrolase protein 2974 68.53 0 3143523..3144974 + 483 162148820 deaD GDI3049 - cold-shock DEAD box protein A-like protein 2975 72.99 +1 3145038..3146318 + 426 162148821 rumA GDI3050 - 23S rRNA (uracil-5-)-methyltransferase RumA 2976 63.47 0 3146329..3146703 + 124 162148822 - GDI3051 - hypothetical protein 2977 66.92 0 3146767..3147555 + 262 162148823 - GDI3052 - hypothetical protein 2978 67.72 0 3147669..3148049 - 126 162148824 iscA GDI3053 - putative iron-binding protein iscA 2979 65.82 0 3148070..3148543 - 157 162148825 - GDI3054 - putative phenylacetic acid degradation protein PaaD 2980 71.36 0 3148540..3148965 - 141 162148826 nifU GDI3055 - putative nitrogen fixation protein nifU 2981 68.27 0 3148986..3150233 - 415 162148827 sufS GDI3056 - putative cysteine desulfurase 2982 70.84 0 3150235..3151527 - 430 162148828 sufD GDI3057 - putative FeS assembly protein SufD 2983 66.67 0 3151524..3152240 - 238 162148829 sufC GDI3058 - FeS assembly protein SufC 2984 64.65 0 3152313..3153803 - 496 162148830 - GDI3059 - cysteine desulfurase activator complex subunit SufB 2985 69.55 0 3153818..3154303 - 161 162148831 - GDI3060 - Rrf2 family transcriptional regulator 2986 70.46 0 3154524..3156131 - 535 162148832 - GDI3061 - hypothetical protein 2987 69.07 0 3156048..3158873 + 941 162148833 ppc GDI3062 - putative phosphoenolpyruvate carboxylase 2988 71.97 0 3158912..3159760 + 282 162148834 - GDI3063 - putative metallo-beta-lactamase superfamily protein 2989 64.71 0 3159821..3161455 + 544 162148835 - GDI3064 - putative serine carboxypeptidase 2990 62.83 0 3161533..3163641 - 702 162148836 fusA GDI3065 - elongation factor G 2991 64.69 0 3163826..3164128 - 100 162148837 rpmB GDI3066 - 50S ribosomal protein L28 2992 67.95 0 3164295..3164528 - 77 162148838 - GDI3067 - hypothetical protein 2993 68.14 0 3164677..3166506 - 609 162148839 - GDI3068 - putative ABC transporter 2994 69.87 0 3166531..3167499 + 322 162148840 - GDI3069 - putative nucleoside diphosphate 2995 70.66 0 3167496..3167921 + 141 162148841 - GDI3070 - hypothetical protein 2996 68.01 0 3168009..3170096 + 695 162148842 ptrB GDI3071 - putative protease II 2997 67.89 0 3170140..3171285 + 381 162148843 - GDI3072 - putative permease 2998 67.82 0 3171453..3172148 - 231 162148844 merR GDI3073 - MerR family transcriptional regulator 2999 63.21 0 3172145..3172462 - 105 162148845 ihfA GDI3074 - putative integration host factor alpha-subunit 3000 67.93 0 3172568..3173593 - 341 162148846 fabH GDI3075 - putative 3-oxoacyl-[acyl-carrier-protein] synthase 3 (3-oxoacyl [acyl-carrier-protein] synthase III) (Beta-ketoacyl-ACP synthase III (KAS III) 3001 65.96 0 3173633..3174757 - 374 162148847 plsX GDI3076 - putative glycerol-3-phosphate acyltransferase PlsX 3002 70.35 0 3175197..3175712 - 171 162148848 - GDI3077 - hypothetical protein 3003 65.44 0 3175889..3176458 + 189 162148849 - GDI3078 - SmpA/OmlA family lipoprotein 3004 69.37 0 3176467..3177870 - 467 162148850 - GDI3079 - putative sensor signal transduction histidine kinase 3005 71.61 0 3177867..3178655 - 262 162148851 ompR GDI3080 - putative transcriptional regulatory protein ompR 3006 70.11 0 3178618..3179169 - 183 162148852 marR GDI3081 - MarR family transcriptional regulator 3007 74.73 +1 3179183..3179827 - 214 162148853 - GDI3082 - hypothetical protein 3008 67.42 0 3179824..3180354 - 176 162148854 def2 GDI3083 - putative peptide deformylase 2 3009 61.27 0 3180572..3180775 + 67 162148855 rpsU GDI3084 - 30S ribosomal protein S21 3010 66.76 0 3180890..3182002 - 370 162148856 leuB GDI3085 - 3-isopropylmalate dehydrogenase 3011 64.58 0 3182036..3182659 - 207 162148857 leuD GDI3086 - isopropylmalate isomerase small subunit 3012 68.87 0 3182663..3184114 - 483 162148858 leuC GDI3087 - isopropylmalate isomerase large subunit 3013 66.67 0 3184178..3184558 - 126 162148859 rplS GDI3088 - 50S ribosomal protein L19 3014 72.13 +1 3184575..3185288 - 237 162148860 trmD GDI3089 - putative tRNA (guanine-N(1)-)-methyltransferase 3015 70.72 0 3185285..3185851 - 188 162148861 rimM GDI3090 - putative 16S rRNA-processing protein rimM 3016 70.76 0 3185889..3186230 - 113 162148862 rpsP GDI3091 - 30S ribosomal protein S16 3017 67.89 0 3186295..3187680 - 461 162148863 ffh GDI3092 - putative signal recognition particle protein 3018 66.10 0 3187830..3188357 - 175 162148864 - GDI3093 - hypothetical protein 3019 69.23 0 3188483..3189184 - 233 162148865 phoU GDI3094 - phosphate transporter PhoU 3020 67.87 0 3189210..3190040 - 276 162148866 pstB GDI3095 - putative phosphate import ATP-binding protein pstB 3021 73.93 +1 3190042..3190950 - 302 162148867 pstA GDI3096 - putative phosphate transport system permease protein 3022 70.16 0 3190952..3191953 - 333 162148868 pstC GDI3097 - putative phosphate transport system permease protein 3023 73.77 +1 3193085..3193816 - 243 162148869 - GDI3099 - putative ABC transporter 3024 70.39 0 3193824..3194333 - 169 162148870 rnhA GDI3100 - putative ribonuclease H 3025 71.22 0 3194323..3195288 - 321 162148871 - GDI3101 - putative homoserine kinase 3026 68.91 0 3195304..3196371 - 355 162148872 ispH GDI3102 - putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3027 67.00 0 3196533..3197135 + 200 162148873 - GDI3103 - hypothetical protein 3028 70.71 0 3197152..3199131 + 659 162148874 - GDI3104 - putative oligopeptide transporter 3029 70.88 0 3199151..3200146 + 331 162148875 - GDI3105 - putative oxidoreductase protein 3030 68.63 0 3200191..3201867 + 558 162148876 - GDI3106 - oligoendopeptidase F 3031 71.88 0 3201904..3202440 - 178 162148877 - GDI3107 - putative thioredoxin protein 66.22 MEAN 5.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0