version 1.0
Gluconacetobacter diazotrophicus PAl 5, complete genome - 1..3944163 3778 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2233 64.66 0 2357205..2358350 - 381 162148079 recA GDI2296 - protein recA (recombinase A) 2234 73.84 +1 2358425..2359930 - 501 162148080 ggt GDI2297 - gamma-glutamyltranspeptidase precursor 2235 73.09 +1 2360114..2360923 + 269 162148081 - GDI2298 - putative oxidoreductase 2236 69.01 0 2360976..2362211 - 411 162148082 hemA GDI2299 - 5-aminolevulinate synthase 2237 71.19 0 2362325..2362921 - 198 162148083 - GDI2300 - hypothetical protein 2238 73.61 +1 2362864..2364981 + 705 162148084 cbbT GDI2301 - putative transketolase 2239 66.47 0 2365002..2366024 + 340 162148085 gap GDI2302 - glyceraldehyde-3-phosphate dehydrogenase 2240 69.04 0 2366024..2367247 + 407 162148086 pgk GDI2303 - phosphoglycerate kinase 2241 69.42 0 2367270..2368250 - 326 162148087 ftsY GDI2304 - cell division protein ftsY 2242 71.58 0 2368252..2369514 - 420 162148088 - GDI2305 - hypothetical protein 2243 72.16 +1 2369511..2370347 - 278 162148089 dapF GDI2306 - putative diaminopimelate epimerase 2244 64.68 0 2370402..2370803 - 133 162148090 gloA GDI2307 - putative lactoylglutathione lyase 2245 70.87 0 2370860..2371549 + 229 162148091 - GDI2308 - putative methyltransferase protein 2246 67.55 0 2371757..2373676 + 639 162148092 - GDI2309 - hypothetical protein 2247 62.78 0 2373735..2374094 + 119 162148093 - GDI2310 - hypothetical protein 2248 71.41 0 2374181..2374918 - 245 162148094 - GDI2311 - putative ABC-type Fe3+ transport system ATP-binding component 2249 72.30 +1 2374915..2375943 - 342 162148095 - GDI2312 - putative ABC-type Fe3+ transport system permease component 2250 68.47 0 2375940..2376884 - 314 162148096 - GDI2313 - putative ABC-type Fe3+ transport system periplasmic component 2251 67.18 0 2377073..2377267 - 64 162148097 - GDI2314 - hypothetical protein 2252 68.57 0 2377463..2380345 - 960 162148098 gcvP GDI2315 - glycine dehydrogenase 2253 67.21 0 2380383..2380748 - 121 162148099 gcvH GDI2316 - glycine cleavage system H protein 2254 70.89 0 2380771..2382000 - 409 162148100 gcvT GDI2317 - glycine cleavage system aminomethyltransferase T 2255 61.76 0 2382312..2382617 + 101 162148101 - GDI2318 - putative antibiotic biosynthesis monooxygenase 2256 66.67 0 2382669..2383538 - 289 162148102 spe GDI2319 - spermidine synthase 2257 61.26 0 2383660..2384121 - 153 162148103 spe GDI2320 - putaive S-adenosylmethionine decarboxylase proenzyme 2258 68.06 0 2384277..2387210 - 977 162148104 uvrA GDI2321 - excinuclease ABC subunit A 2259 69.51 0 2387442..2388038 + 198 162148105 ssb GDI2322 - single-stranded DNA-binding protein 2260 66.92 0 2388206..2390998 + 930 162148106 gyrA GDI2323 - DNA gyrase subunit A 2261 66.27 0 2390991..2391500 + 169 162148107 coaD GDI2324 - putative phosphopantetheine adenylyltransferase 2262 66.87 0 2391559..2392044 + 161 162148108 ppi GDI2325 - putative peptidyl-prolyl cis-trans isomerase B 2263 52.63 -2 2392254..2394020 - 588 162148109 mcpA GDI2326 - putative chemoreceptor mcpA 2264 65.19 0 2394294..2395103 - 269 162148110 - GDI2327 - hypothetical protein 2265 63.98 0 2395261..2395632 - 123 162148111 - GDI2328 - hypothetical protein 2266 71.49 0 2395962..2396708 - 248 162148112 - GDI2329 - hypothetical protein 2267 67.31 0 2396701..2396856 - 51 162148113 - GDI2330 - hypothetical protein 2268 65.30 0 2396863..2397816 + 317 162148114 glyQ GDI2331 - glycyl-tRNA synthetase subunit alpha 2269 71.82 0 2397820..2399874 + 684 162148115 glyrs GDI2332 - glycyl-tRNA synthetase beta chain (glycine--tRNA ligas beta chain) (glyrs) 2270 65.63 0 2400286..2401440 - 384 162148116 merD GDI2333 - putative rod shape-determining protein merD 2271 69.03 0 2401480..2403384 - 634 162148117 - GDI2334 - putative cell elongation specific D,D-transpeptidase 2272 71.28 0 2403440..2404003 - 187 162148118 - GDI2335 - hypothetical protein 2273 66.56 0 2404016..2404921 - 301 162148119 mreC GDI2336 - putative rod shape-determining protein mreC 2274 65.87 0 2405059..2406192 - 377 162148120 mreB GDI2337 - putative rod shape-determining protein mreB 2275 78.10 +2 2406451..2406756 + 101 162148121 - GDI2338 - hypothetical protein 2276 67.56 0 2406948..2408522 - 524 162148122 leuA GDI2339 - 2-isopropylmalate synthase 2277 67.91 0 2408826..2409386 - 186 162148123 - GDI2340 - putative chloramphenicol 3-O phosphotransferase 2278 70.00 0 2409390..2410289 - 299 162148124 amiA GDI2341 - putative N-acetylmuramoyl-L-alanine amidase amiA precurso 2279 70.54 0 2410302..2410688 + 128 162148125 - GDI2342 - hypothetical protein 2280 70.14 0 2410828..2413938 + 1036 162148126 rne GDI2343 - putative ribonuclease E 2281 62.53 0 2414171..2416054 + 627 162148127 mcpA GDI2344 - putative chemoreceptor mcpA (methyl-accepting chemotaxis protein) 2282 61.33 0 2415993..2416292 - 99 162148128 - GDI2345 - hypothetical protein 2283 71.50 0 2416317..2417786 - 489 162148129 - GDI2346 - hypothetical protein 2284 73.30 +1 2417810..2419060 - 416 162148130 - GDI2347 - putative pyridine nucleotide-disulphide oxidoreductase 2285 67.83 0 2419092..2420558 - 488 162148131 - GDI2348 - putative amidohydrolase 2286 68.66 0 2420758..2421609 - 283 162148132 cysE GDI2349 - putative serine acetyltransferase 2287 70.78 0 2421686..2422948 - 420 162148133 ubiH GDI2350 - 2-octaprenyl-6-methoxyphenol hydroxylase 2288 60.18 -1 2423192..2423530 + 112 162148134 glnK GDI2351 - putative nitrogen regulatory protein 2289 68.61 0 2423527..2424918 + 463 162148135 nrgA GDI2352 - ammonium transporter 2290 68.86 0 2425088..2425588 + 166 162148136 - GDI2353 - hypothetical protein 2291 72.06 +1 2425632..2426576 - 314 162148137 - GDI2354 - hypothetical protein 2292 68.22 0 2426602..2427564 - 320 162148138 pip GDI2355 - putative proline iminopeptidase 2293 72.72 +1 2427578..2428552 - 324 162148139 xerC GDI2356 - site-specific tyrosine recombinase XerC 2294 59.83 -1 2428566..2428682 - 38 162148140 - GDI2357 - hypothetical protein 2295 73.32 +1 2428728..2431040 + 770 162148141 priA GDI2358 - primosome assembly protein PriA 2296 65.28 0 2431047..2433203 - 718 162148142 kat GDI2359 - catalase HPII 2297 70.34 0 2433303..2435018 - 571 162148143 - GDI2360 - putative oxidoreductases 2298 68.38 0 2435193..2436185 + 330 162148144 zitB GDI2361 - Zinc transporter zitB 2299 69.25 0 2436189..2437118 + 309 162148145 fieF GDI2362 - putative cation-efflux pump fieF 2300 69.57 0 2437238..2438647 + 469 162148146 clcA GDI2363 - putative H(+)/Cl(-) exchange transporter clcA 2301 65.97 0 2438669..2440111 - 480 162148147 - GDI2364 - putative cytochrome P450 2302 69.47 0 2440179..2441177 - 332 162148148 - GDI2365 - hypothetical protein 2303 67.84 0 2441241..2442263 - 340 162148149 - GDI2366 - cobalamin synthesis protein 2304 77.84 +2 2442400..2443509 - 369 162148150 - GDI2367 - putative glycosyl transferase, group 1 2305 70.06 0 2443517..2444194 - 225 162148151 - GDI2368 - glutathione S-transferase 2306 72.56 +1 2444224..2445309 - 361 162148152 trmU GDI2369 - putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2307 67.65 0 2445331..2445636 - 101 162148153 fxdB GDI2370 - putative 2Fe-2S ferredoxin 2308 72.37 +1 2445633..2446859 - 408 162148154 iscS GDI2371 - putative cysteine desulfurase 2309 74.06 +1 2446856..2448031 - 391 162148155 iscS GDI2372 - putative cysteine desulfurase 2310 64.17 0 2448162..2448401 - 79 162148156 - GDI2373 - hypothetical protein 2311 66.52 0 2448666..2449331 + 221 162148157 - GDI2374 - hypothetical protein 2312 67.95 0 2449446..2450687 + 413 162148158 tyrS GDI2375 - putative tyrosyl-tRNA synthetase 2313 74.21 +1 2450701..2451111 + 136 162148159 - GDI2376 - hypothetical protein 2314 68.00 0 2451065..2451439 - 124 162148160 - GDI2377 - putative ubiquinol-cytochrome c reductase 2315 69.05 0 2451516..2452775 + 419 162148161 - GDI2378 - aminopeptidase 2316 72.39 +1 2452772..2453278 + 168 162148162 - GDI2379 - hypothetical protein 2317 69.82 0 2453313..2454452 - 379 162148163 - GDI2380 - putative capsular polysaccharide biosynthesis glycosyl transferase cap 2318 70.51 0 2454489..2456282 - 597 162148164 - GDI2381 - putative heparinase II/III-like 2319 67.89 0 2456344..2457081 - 245 162148165 - GDI2382 - ribulose-phosphate 3-epimerase 2320 75.73 +1 2457176..2458477 - 433 162148166 rsmB GDI2383 - putative ribosomal RNA small subunit methyltransferase B 2321 72.69 +1 2458622..2459368 + 248 162148167 - GDI2384 - putative alanine racemase 2322 65.57 0 2459550..2461469 + 639 162148168 kup GDI2385 - potassium transport system protein 2323 70.14 0 2461459..2462640 + 393 162148169 - GDI2386 - coproporphyrinogen III oxidase 2324 66.92 0 2462671..2463861 + 396 162148170 rih GDI2387 - putative pyrimidine-specific ribonucleoside hydrolase 2325 71.59 0 2463869..2464315 + 148 162148171 - GDI2388 - hypothetical protein 2326 71.79 0 2464377..2465684 + 435 162148172 - GDI2389 - putative lytic transglycosylase 2327 74.19 +1 2465707..2467659 - 650 162148173 bglX GDI2390 - putative periplasmic beta-glucosidase precursor 2328 70.67 0 2467831..2469003 + 390 162148174 - GDI2391 - putative major facilitator transporter protein 2329 69.89 0 2469165..2469692 + 175 162148175 - GDI2392 - hypothetical protein 2330 69.29 0 2469763..2472393 + 876 162148176 leuS GDI2393 - leucyl-tRNA synthetase 2331 68.04 0 2472398..2473126 + 242 162148177 - GDI2394 - hypothetical protein 2332 74.46 +1 2473123..2474136 + 337 162148178 holA GDI2395 - DNA polymerase III subunit delta 66.22 MEAN 5.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0