version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 857 67.44 +1 920287..920802 - 171 39995967 - GSU0861 - hypothetical protein 858 62.70 0 920953..921810 - 285 39995968 folD-2 GSU0862 - folD bifunctional protein 859 65.08 0 921967..922218 - 83 39995969 - GSU0863 - hypothetical protein 860 66.05 0 922321..922644 - 107 39995970 - GSU0864 - hypothetical protein 861 61.33 0 922631..923080 - 149 39995971 - GSU0865 - cell division protein DivIVA, putative 862 59.37 0 923080..923394 - 104 39995972 - GSU0866 - YGGT family protein 863 61.09 0 923469..924239 - 256 39995973 - GSU0867 - ubiquinone/menaquinone biosynthesis methyltransferase UbiE, putative 864 62.92 0 924358..925770 + 470 39995974 - GSU0868 - hypothetical protein 865 59.18 0 925879..926907 + 342 39995975 - GSU0869 - LysM domain/NLP/P60 family protein 866 63.77 0 926968..927381 + 137 39995976 mutT GSU0870 - mutator mutT protein 867 67.21 +1 927359..929023 + 554 39995977 - GSU0871 - radical SAM domain/B12 binding domain-containing protein 868 61.97 0 929102..929569 - 155 39995978 - GSU0872 - putative lipoprotein 869 68.38 +1 929327..929560 + 77 39995979 - GSU0873 - hypothetical protein 870 62.69 0 929682..932924 - 1080 39995980 - GSU0874 - hypothetical protein 871 64.84 0 932951..933607 + 218 39995981 - GSU0875 - hypothetical protein 872 69.66 +1 933685..934554 + 289 39995982 - GSU0876 - diacylglycerol kinase catalytic subunit 873 63.59 0 934847..935593 + 248 39995983 - GSU0877 - response regulator 874 68.97 +1 935517..936602 - 361 39995984 - GSU0878 - glycosyl transferase, group 2 family protein 875 61.77 0 936742..937680 - 312 39995985 cheV GSU0879 - chemotaxis protein CheV 876 69.79 +1 937790..939805 - 671 39995986 - GSU0880 - molybdopterin oxidoreductase family protein 877 65.78 0 939825..941399 - 524 39995987 - GSU0881 - sensor histidine kinase 878 71.36 +1 941403..942275 - 290 39995988 - GSU0882 - hypothetical protein 879 59.29 0 942296..944179 - 627 39995989 - GSU0883 - ferric enterobactin receptor, putative 880 67.91 +1 944454..945986 + 510 39995990 - GSU0884 - radical SAM domain-containing protein 881 64.47 0 945928..947022 - 364 39995991 - GSU0885 - cobyrinic acid a,c-diamide synthase family protein 882 66.67 +1 947252..948577 + 441 39995992 - GSU0886 - radical SAM domain-containing protein 883 58.37 0 948574..949188 - 204 39995993 - GSU0887 - hypothetical protein 884 57.62 0 949163..949372 - 69 39995994 - GSU0888 - hypothetical protein 885 67.75 +1 949477..949752 - 91 39995995 - GSU0889 - acylphosphatase 886 67.01 +1 949753..951765 - 670 39995996 ligA GSU0890 - DNA ligase, NAD-dependent 887 66.79 +1 951817..954297 + 826 39995997 - GSU0891 - subtilase domain-containing protein 888 63.17 0 956555..957097 - 180 39995998 - GSU0893 - thioredoxin peroxidase 889 59.11 0 957394..957909 + 171 39995999 - GSU0894 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 890 63.43 0 957967..960033 - 688 39996000 - GSU0895 - GAF domain/GGDEF domain-containing protein 891 63.05 0 960231..961613 - 460 39996001 tldD GSU0896 - tldD protein 892 64.61 0 962153..963028 + 291 39996002 - GSU0897 - hypothetical protein 893 68.49 +1 963031..964842 + 603 39996003 recQ GSU0898 - ATP-dependent DNA helicase RecQ 894 69.14 +1 964941..966554 + 537 39996004 - GSU0899 - hypothetical protein 895 67.62 +1 966579..967520 - 313 39996005 - GSU0900 - hypothetical protein 896 68.43 +1 967566..968357 + 263 39996006 - GSU0901 - hypothetical protein 897 62.41 0 970535..971404 - 289 39996007 - GSU0904 - HD domain-containing protein 898 66.37 +1 971391..971723 - 110 39996008 - GSU0905 - hypothetical protein 899 55.22 -1 972287..972487 - 66 39996009 rpsU-1 GSU0906 - 30S ribosomal protein S21 900 64.58 0 972677..973348 - 223 39996010 - GSU0907 - thiF family protein 901 68.79 +1 973352..973633 - 93 39996011 - GSU0908 - moaD family protein 902 67.24 +1 973639..974862 - 407 39996012 - GSU0909 - pyridine nucleotide-disulphide oxidoreductase family protein 903 67.61 +1 974864..976669 - 601 39996013 - GSU0910 - aldehyde:ferredoxin oxidoreductase, tungsten-containing 904 63.12 0 976671..977150 - 159 39996014 - GSU0911 - iron-sulfur cluster-binding protein 905 66.12 +1 977215..977940 - 241 39996015 - GSU0912 - hypothetical protein 906 66.93 +1 978103..980004 + 633 39996016 - GSU0913 - ABC transporter, ATP-binding protein 907 68.75 +1 980161..981504 + 447 39996017 rhlE-2 GSU0914 - ATP-dependent RNA helicase RhlE 908 58.61 0 981656..982015 + 119 39996018 - GSU0915 - hypothetical protein 909 63.12 0 982110..983294 - 394 39996019 - GSU0916 - methyl-accepting chemotaxis protein 910 65.71 0 983484..983903 - 139 39996020 - GSU0917 - hypothetical protein 911 66.00 0 983875..985077 - 400 39996021 - GSU0918 - S-adenosylmethionine synthetase 912 60.36 0 985247..985468 - 73 39996022 - GSU0919 - hypothetical protein 913 58.23 0 985467..985715 + 82 39996023 - GSU0920 - hypothetical protein 914 63.82 0 986118..988544 - 808 39996024 - GSU0921 - ribonuclease, Rne/Rng family protein 915 65.84 0 988816..990753 + 645 39996025 - GSU0922 - ABC transporter, ATP-binding protein 916 65.45 0 990895..993201 + 768 39996026 loN-1 GSU0923 - ATP-dependent protease La 917 62.39 0 993208..993978 + 256 39996027 - GSU0924 - ABC transporter, permease protein, putative 918 65.49 0 993989..994753 + 254 39996028 - GSU0925 - ABC transporter, ATP-binding protein 919 65.00 0 994769..995851 + 360 39996029 - GSU0926 - mce-related protein 920 64.39 0 995984..997390 + 468 39996030 - GSU0927 - M16 family peptidase 921 63.88 0 997428..998864 + 478 39996031 - GSU0928 - M16 family peptidase 922 57.41 0 998881..998988 + 35 39996032 - GSU0929 - hypothetical protein 923 61.48 0 999205..1000476 + 423 39996033 - GSU0930 - sulfur transferase, putative, selenocysteine-containing 924 66.89 +1 1000592..1001497 - 301 39996034 - GSU0931 - rhodanese-like domain-containing protein 925 66.27 +1 1001567..1002817 - 416 39996035 uraA GSU0932 - uracil permease 926 64.13 0 1002836..1003465 - 209 39996036 upp GSU0933 - uracil phosphoribosyltransferase 927 62.86 0 1003658..1004287 + 209 39996037 - GSU0934 - hypothetical protein 928 64.21 0 1004344..1005930 - 528 39996038 - GSU0935 - methyl-accepting chemotaxis protein, putative 929 67.67 +1 1006181..1006876 + 231 39996039 - GSU0936 - glutamine amidotransferase, class I 930 64.32 0 1007092..1008243 + 383 39996040 aksA GSU0937 - trans-homoaconitate synthase 931 59.63 0 1008591..1009343 + 250 39996041 - GSU0938 - hypothetical protein 932 56.64 0 1009395..1009733 + 112 39996042 - GSU0939 - nitrogen regulatory protein P-II, putative 933 65.17 0 1009771..1011240 + 489 39996043 - GSU0940 - ammonium transporter 934 61.31 0 1011471..1012217 + 248 39996044 - GSU0941 - sensor histidine kinase, putative 935 65.27 0 1012334..1013119 + 261 39996045 suhB GSU0942 - inositol-1-monophosphatase 936 63.13 0 1013207..1013941 + 244 39996046 - GSU0943 - hypothetical protein 937 65.34 0 1014277..1015410 + 377 39996047 metC-1 GSU0944 - cystathionine beta-lyase 938 65.79 0 1015426..1016562 + 378 39996048 metC-2 GSU0945 - cystathionine beta-lyase 939 64.85 0 1016762..1019290 + 842 39996049 - GSU0946 - sensory box/GGDEF family protein 940 64.96 0 1019379..1020083 - 234 39996050 - GSU0947 - ABC transporter, ATP-binding protein 941 65.75 0 1020101..1021300 - 399 39996051 - GSU0948 - ABC transporter, permease protein, putative 942 70.50 +1 1021297..1022469 - 390 39996052 - GSU0949 - RND family efflux transporter MFP subunit 943 71.14 +1 1022466..1023740 - 424 39996053 - GSU0950 - outer membrane efflux protein 944 63.62 0 1023807..1024397 - 196 39996054 - GSU0951 - TetR family transcriptional regulator 945 55.53 0 1024618..1025910 + 430 39996055 - GSU0952 - GGDEF domain-containing protein 946 54.31 -1 1026184..1026774 - 196 39996056 - GSU0953 - hypothetical protein 947 55.76 0 1027076..1028056 - 326 39996057 - GSU0954 - hypothetical protein 948 60.84 0 1029182..1030486 + 434 39996058 - GSU0955 - group II intron, maturase 949 33.03 -2 1031005..1031670 - 221 39996059 - GSU0956 - hypothetical protein 950 51.03 -1 1031690..1032808 - 372 39996060 - GSU0957 - ISGsu1, transposase 951 52.91 -1 1032982..1033170 - 62 39996061 - GSU0958 - putative lipoprotein 952 47.15 -2 1033287..1034075 - 262 39996062 - GSU0959 - hypothetical protein 953 48.48 -2 1034351..1034449 + 32 39996063 - GSU0960 - hypothetical protein 954 51.77 -1 1034609..1035655 - 348 39996064 - GSU0961 - ISGsu4, transposase 955 61.99 0 1036181..1038148 + 655 39996065 - GSU0962 - sensor histidine kinase 956 62.11 0 1038168..1039571 + 467 39996066 - GSU0963 - sigma-54 dependent DNA-binding response regulator 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.