version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 11 61.77 0 17115..19298 + 727 39995121 - GSU0010 - sensory box histidine kinase/response regulator 12 64.19 0 19306..20232 + 308 39995122 - GSU0011 - ABC transporter, ATP-binding protein 13 64.54 0 20296..21705 - 469 39995123 hemG GSU0012 - protoporphyrinogen oxidase 14 57.11 0 21747..22175 - 142 39995124 - GSU0013 - MarR family transcriptional regulator 15 60.68 0 22322..23206 + 294 39995125 - GSU0014 - phage prohead protease 16 59.94 0 23311..24276 - 321 39995126 - GSU0015 - peptidyl-prolyl cis-trans isomerase domain-containing protein 17 59.77 0 24354..25295 - 313 39995127 - GSU0016 - peptidyl-prolyl cis-trans isomerase domain-containing protein 18 64.59 0 25356..28829 - 1157 39995128 mfd GSU0017 - transcription-repair coupling factor 19 65.62 0 28904..30340 - 478 39995129 - GSU0018 - GntR family transcriptional regulator 20 63.25 0 30586..31464 + 292 39995130 - GSU0019 - pentapeptide repeat-containing protein 21 61.67 0 31533..32072 - 179 39995131 - GSU0020 - hexapeptide transferase family protein 22 62.19 0 32106..33020 - 304 39995132 nadA GSU0021 - quinolinate synthetase 23 62.20 0 33252..33587 + 111 39995133 - GSU0022 - mttA/Hcf106 family protein 24 60.69 0 33645..34481 - 278 39995134 - GSU0023 - TPR domain-containing protein 25 60.68 0 34573..35157 - 194 39995135 - GSU0024 - OmpA domain-containing protein 26 61.05 0 35287..36585 - 432 39995136 - GSU0025 - tolB protein 27 62.41 0 36585..37265 - 226 39995137 - GSU0026 - TonB-dependent receptor, putative 28 59.76 0 37322..37741 - 139 39995138 - GSU0027 - TolR protein 29 59.73 0 37751..38428 - 225 39995139 tolQ GSU0028 - tolQ protein 30 62.95 0 38522..39301 - 259 39995140 - GSU0029 - carbon-nitrogen family hydrolase 31 64.77 0 39428..40585 + 385 39995141 - GSU0030 - oxygen-independent coproporphyrinogen III oxidase, putative 32 60.93 0 40721..41749 + 342 39995142 hrcA GSU0031 - heat-inducible transcription repressor HrcA 33 61.53 0 41789..42391 + 200 39995143 grpE GSU0032 - GrpE protein 34 61.17 0 42473..44383 + 636 39995144 dnaK GSU0033 - chaperone protein dnaK 35 60.43 0 44496..45617 + 373 39995145 dnaJ GSU0034 - chaperone protein dnaJ 36 62.78 0 45707..46246 - 179 39995146 - GSU0035 - 2',5' RNA ligase, putative 37 63.73 0 46259..47314 - 351 39995147 - GSU0036 - capsule biosynthesis protein, putative 38 58.47 0 47406..48674 + 422 39995148 serS GSU0037 - seryl-tRNA synthetase 39 52.35 -1 48933..49421 + 162 39995149 - GSU0038 - putative lipoprotein 40 44.76 -2 49833..49937 + 34 39995150 - GSU0039 - hypothetical protein 41 65.48 0 50370..51041 + 223 39995151 - GSU0040 - hypothetical protein 42 67.33 +1 51143..51748 + 201 39995152 lexA-1 GSU0041 - LexA repressor 43 65.06 0 51755..52003 + 82 39995153 - GSU0042 - hypothetical protein 44 63.12 0 52000..53241 + 413 39995154 - GSU0043 - ImpB/MucB/SamB family protein 45 56.53 0 53925..60278 - 2117 39995155 - GSU0044 - hypothetical protein 46 44.22 -2 60303..61211 - 302 39995156 - GSU0045 - hypothetical protein 47 58.77 0 61246..62271 + 341 39995157 - GSU0046 - ISGsu6, transposase OrfA 48 58.24 0 62268..63062 + 264 39995158 - GSU0047 - transposase/IS protein 49 58.42 0 63072..63908 + 278 39995159 - GSU0048 - integrase 50 54.62 -1 64130..65092 + 320 39995160 - GSU0049 - hypothetical protein 51 56.39 0 65166..65564 + 132 39995161 - GSU0050 - hypothetical protein 52 56.54 0 65570..68335 + 921 39995162 - GSU0051 - CRISPR-associated HD domain-containing protein 53 50.39 -1 68332..69222 + 296 39995163 - GSU0052 - hypothetical protein 54 54.03 -1 69225..70316 + 363 39995164 - GSU0053 - hypothetical protein 55 58.09 0 70330..71949 + 539 39995165 - GSU0054 - hypothetical protein 56 55.56 0 72000..72296 - 98 39995166 - GSU0055 - hypothetical protein 57 51.85 -1 72289..72585 - 98 39995167 - GSU0056 - hypothetical protein 58 63.51 0 72630..74309 + 559 39995168 - GSU0057 - CRISPR-associated Cas1/Cas4 family protein 59 52.43 -1 74314..74601 + 95 39995169 - GSU0058 - CRISPR-associated Cas2 family protein 60 59.63 0 77772..78041 - 89 39995170 - GSU0059 - hypothetical protein 61 59.17 0 78089..78208 + 39 39995171 - GSU0060 - hypothetical protein 62 55.56 0 78381..78839 + 152 39995172 - GSU0061 - hypothetical protein 63 57.36 0 78940..79272 + 110 39995173 - GSU0062 - TraD protein, putative 64 63.51 0 79477..79698 + 73 39995174 - GSU0063 - hypothetical protein 65 55.00 -1 79725..81044 - 439 39995175 - GSU0064 - integrative genetic element Gsu32, integrase 66 58.15 0 81425..81964 + 179 39995176 - GSU0065 - cytidine/deoxycytidylate deaminase family protein 67 59.04 0 82566..83273 + 235 39995177 - GSU0066 - AhpC/Tsa family protein, selenocysteine-containing 68 57.87 0 83254..83901 + 215 39995178 - GSU0067 - carbonic anhydrase 69 60.46 0 84006..84488 + 160 39995179 - GSU0068 - cytochrome c family protein 70 61.63 0 84481..85254 + 257 39995180 - GSU0069 - oxidoreductase, iron-sulfur cluster-binding subunit 71 58.93 0 85257..86510 + 417 39995181 - GSU0070 - oxidoreductase, membrane subunit 72 54.89 -1 86581..87030 - 149 39995182 - GSU0071 - hypothetical protein 73 48.96 -2 87371..87466 - 31 39995183 - GSU0072 - hypothetical protein 74 60.70 0 87476..88078 - 200 39995184 - GSU0073 - outer membrane protein, putative 75 62.84 0 88132..88785 - 217 39995185 elbB GSU0074 - isoprenoid biosynthesis protein 76 64.81 0 88858..89775 - 305 39995186 - GSU0075 - hypothetical protein 77 63.50 0 89887..90486 + 199 39995187 - GSU0076 - hypothetical protein 78 59.00 0 90505..90765 + 86 39995188 - GSU0077 - hypothetical protein 79 65.50 0 90775..91116 + 113 39995189 - GSU0078 - hypothetical protein 80 58.54 0 91135..91725 - 196 39995190 - GSU0079 - Cro/CI family transcriptional regulator 81 63.06 0 91907..93322 + 471 39995191 degQ GSU0080 - protease degQ 82 61.36 0 93366..93629 + 87 39995192 - GSU0081 - hypothetical protein 83 65.43 0 93714..94682 + 322 39995193 rluD GSU0082 - ribosomal large subunit pseudouridine synthase D 84 64.92 0 94685..95485 + 266 39995194 - GSU0083 - hypothetical protein 85 67.43 +1 95499..96674 + 391 39995195 - GSU0084 - hypothetical protein 86 64.06 0 96773..97615 - 280 39995196 - GSU0085 - heterodisulfide reductase, cytochrome reductase subunit 87 57.35 0 97614..98021 + 135 39995197 - GSU0086 - hypothetical protein 88 63.38 0 98008..99012 - 334 39995198 - GSU0087 - heterodisulfide reductase, iron-sulfur binding subunit, putative 89 65.70 0 99056..99985 - 309 39995199 - GSU0088 - heterodisulfide reductase subunit 90 62.28 0 100019..100519 - 166 39995200 - GSU0089 - heterodisulfide reductase subunit 91 64.26 0 100519..102516 - 665 39995201 - GSU0090 - heterodisulfide reductase subunit 92 64.09 0 102517..103407 - 296 39995202 - GSU0091 - heterodisulfide reductase subunit 93 59.74 0 103404..103952 - 182 39995203 - GSU0092 - heterodisulfide reductase subunit 94 61.92 0 104580..106412 + 610 39995204 - GSU0093 - ABC transporter, ATP-binding/permease protein 95 63.51 0 106783..108522 + 579 39995205 dnaX GSU0094 - DNA polymerase III, gamma and tau subunits 96 56.19 0 108593..108907 + 104 39995206 - GSU0095 - hypothetical protein 97 62.63 0 109096..109689 + 197 39995207 recR GSU0096 - recombination protein RecR 98 62.90 0 109754..113341 + 1195 39995208 - GSU0097 - pyruvate ferredoxin/flavodoxin oxidoreductase 99 57.93 0 113608..114099 + 163 39995209 - GSU0098 - MglB protein 100 56.29 0 114118..114705 + 195 39995210 - GSU0099 - MglA protein 101 53.33 -1 114689..114793 - 34 39995211 - GSU0100 - hypothetical protein 102 62.45 0 114856..116634 + 592 39995212 - GSU0101 - ABC transporter, ATP-binding/permease protein 103 63.79 0 116665..118575 + 636 39995213 selB GSU0102 - selenocysteine-specific translation elongation factor 104 58.24 0 118723..120834 + 703 39995214 - GSU0103 - sensory box histidine kinase 105 61.03 0 120852..121241 + 129 39995215 - GSU0104 - response regulator, putative 106 56.09 0 121302..121613 - 103 39995216 - GSU0105 - cytochrome c family protein, putative 107 59.69 0 121771..122544 + 257 39995217 - GSU0106 - soj protein 108 60.86 0 122567..123376 + 269 39995218 - GSU0107 - ParB-like nuclease domain-containing protein 109 56.10 0 123555..123980 + 141 39995219 - GSU0108 - ATP synthase F0, B' subunit, putative 110 56.16 0 124109..124603 + 164 39995220 atpF GSU0109 - ATP synthase F0, B subunit 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.