version 1.0
Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 436 64.03 0 470654..471184 + 176 39995546 - GSU0438 - putative lipoprotein 437 64.66 0 471184..472080 + 298 39995547 ubiA GSU0439 - prenyltransferase 438 65.71 0 472077..472700 + 207 39995548 - GSU0440 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative 439 65.19 0 472705..473790 + 361 39995549 - GSU0441 - radical SAM domain-containing protein 440 65.73 0 473790..474854 + 354 39995550 - GSU0442 - radical SAM domain-containing protein 441 65.71 0 475021..476166 + 381 39995551 - GSU0443 - ribonuclease D, putative 442 65.01 0 476304..477026 - 240 39995552 - GSU0444 - hypothetical protein 443 66.02 0 476386..477006 + 206 39995553 - GSU0445 - hypothetical protein 444 65.39 0 477066..477848 - 260 39995554 - GSU0446 - hypothetical protein 445 67.00 +1 477851..478750 - 299 39995555 prmA GSU0447 - ribosomal protein L11 methyltransferase 446 64.43 0 478895..480058 + 387 39995556 - GSU0448 - hydrolase, putative 447 44.76 -2 480111..480215 - 34 39995557 - GSU0449 - hypothetical protein 448 61.60 0 480195..481004 + 269 39995558 - GSU0450 - hypothetical protein 449 58.37 0 481052..481726 + 224 39995559 - GSU0451 - DNA-binding response regulator 450 61.70 0 481730..483139 + 469 39995560 - GSU0452 - sensor histidine kinase 451 64.89 0 483145..483876 + 243 39995561 pfs GSU0453 - MTA/SAH nucleosidase 452 64.64 0 483876..484712 + 278 39995562 - GSU0454 - hypothetical protein 453 58.28 0 484815..485267 + 150 39995563 - GSU0455 - lipoprotein A domain-containing protein 454 64.55 0 485319..487868 - 849 39995564 - GSU0456 - hypothetical protein 455 66.81 +1 487869..488558 - 229 39995565 - GSU0457 - putative lipoprotein 456 66.67 +1 489195..489584 - 129 39995566 - GSU0458 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative 457 67.45 +1 489577..490602 - 341 39995567 - GSU0459 - beta-ketoacyl synthase domain-containing protein 458 67.33 +1 490614..491819 - 401 39995568 fabF-1 GSU0460 - 3-oxoacyl-(acyl-carrier-protein) synthase II 459 67.07 +1 491954..492694 - 246 39995569 fabG-1 GSU0461 - 3-oxoacyl-(acyl carrier protein) reductase 460 65.46 0 492743..493816 - 357 39995570 - GSU0462 - M48 family peptidase 461 63.84 0 493813..494943 - 376 39995571 - GSU0463 - hypothetical protein 462 62.50 0 495068..495283 - 71 39995572 - GSU0464 - S4 domain-containing protein 463 62.59 0 495363..495926 + 187 39995573 efp-1 GSU0465 - translation elongation factor P 464 62.63 0 496167..497207 - 346 39995574 ccpA-1 GSU0466 - cytochrome c551 peroxidase 465 64.74 0 497302..498183 - 293 39995575 - GSU0467 - hypothetical protein 466 62.38 0 498210..498722 - 170 39995576 - GSU0468 - hypothetical protein 467 71.47 +2 498751..499104 - 117 39995577 - GSU0469 - hypothetical protein 468 63.58 0 499286..500647 - 453 39995578 - GSU0470 - sigma-54 dependent response regulator 469 64.29 0 500664..501923 - 419 39995579 - GSU0471 - sensor histidine kinase 470 60.22 0 502068..502532 + 154 39995580 - GSU0472 - hypothetical protein 471 64.38 0 502666..503670 + 334 39995581 - GSU0473 - transcriptional regulator, putative 472 60.61 0 503803..506181 + 792 39995582 - GSU0474 - sensory box/GGDEF family protein 473 60.03 0 506171..508039 - 622 39995583 - GSU0475 - sensory box histidine kinase 474 63.48 0 508371..509531 + 386 39995584 - GSU0476 - hypothetical protein 475 63.54 0 509602..510240 + 212 39995585 - GSU0477 - HAD superfamily hydrolase 476 59.69 0 510237..510695 + 152 39995586 - GSU0478 - hypothetical protein 477 66.59 +1 510727..512118 + 463 39995587 aspA GSU0479 - aspartate ammonia-lyase 478 60.89 0 512162..512386 + 74 39995588 - GSU0480 - NifU-like domain-containing protein 479 57.21 0 512423..512623 + 66 39995589 - GSU0481 - hypothetical protein 480 62.47 0 512758..513948 + 396 39995590 - GSU0482 - cardiolipin synthetase, putative 481 62.32 0 514039..514752 + 237 39995591 - GSU0483 - exsB protein 482 58.43 0 514818..515594 + 258 39995592 - GSU0484 - putative GTP cyclohydrolase 483 62.74 0 515708..516445 + 245 39995593 - GSU0485 - hypothetical protein 484 62.20 0 516396..517604 - 402 39995594 ilvA GSU0486 - threonine dehydratase 485 61.75 0 517626..518621 - 331 39995595 - GSU0487 - cation efflux family protein 486 62.78 0 518779..519729 + 316 39995596 trxB GSU0488 - thioredoxin reductase 487 62.35 0 519735..521264 + 509 39995597 - GSU0489 - Mg chelatase-related protein 488 60.09 0 521516..523111 + 531 39995598 - GSU0490 - acetyl-CoA hydrolase/transferase family protein 489 64.45 0 523215..524567 - 450 39995599 rhlE-1 GSU0491 - ATP-dependent RNA helicase RhlE 490 63.50 0 524995..525879 - 294 39995600 - GSU0492 - phage integrase family site specific recombinase 491 62.62 0 526070..527329 + 419 39995601 - GSU0493 - pyridine nucleotide-disulphide oxidoreductase family protein 492 65.69 0 527317..528447 + 376 39995602 - GSU0494 - iron-sulfur cluster-binding protein 493 61.01 0 528549..528707 + 52 39995603 - GSU0495 - hypothetical protein 494 62.45 0 528747..529955 + 402 39995604 - GSU0496 - RND family efflux transporter MFP subunit 495 59.65 0 531917..532087 + 56 39995605 - GSU0498 - hypothetical protein 496 62.17 0 532095..532850 - 251 39995606 - GSU0499 - M23/M37 peptidase domain-containing protein 497 60.82 0 533056..534852 + 598 39995607 typA GSU0500 - GTP-binding protein TypA 498 57.52 0 534968..535732 + 254 39995608 - GSU0501 - putative lipoprotein 499 63.98 0 535734..536105 + 123 39995609 - GSU0502 - putative lipoprotein 500 61.23 0 536089..536511 + 140 39995610 - GSU0503 - crcB protein 501 60.28 0 536521..536880 + 119 39995611 - GSU0504 - hypothetical protein 502 61.18 0 536877..537386 + 169 39995612 - GSU0505 - rhodanese-like domain-containing protein 503 57.31 0 537386..537802 + 138 39995613 - GSU0506 - methylamine utilization protein MauE, putative 504 61.71 0 537876..538460 + 194 39995614 - GSU0507 - hypothetical protein 505 59.24 0 538457..539479 + 340 39995615 - GSU0508 - hypothetical protein 506 59.45 0 539537..542071 - 844 39995616 sfrA GSU0509 - Fe(III) reductase, alpha subunit 507 60.62 0 542195..544213 - 672 39995617 sfrB GSU0510 - Fe(III) reductase, beta subunit 508 58.42 0 544177..545607 + 476 39995618 - GSU0511 - hypothetical protein 509 60.94 0 545697..547337 + 546 39995619 - GSU0512 - hypothetical protein 510 63.97 0 547440..548033 + 197 39995620 - GSU0513 - dephospho-CoA kinase 511 56.70 0 548065..548847 - 260 39995621 - GSU0514 - IclR family transcriptional regulator 512 57.89 0 549161..549616 + 151 39995622 - GSU0515 - universal stress protein 513 59.09 0 549749..550540 - 263 39995623 - GSU0516 - hypothetical protein 514 64.61 0 550546..551760 - 404 39995624 - GSU0517 - hypothetical protein 515 65.35 0 551782..553305 - 507 39995625 - GSU0518 - sodium/solute symporter family protein 516 58.72 0 553298..553624 - 108 39995626 - GSU0519 - hypothetical protein 517 68.87 +1 553701..554927 - 408 39995627 - GSU0520 - hypothetical protein 518 59.84 0 554931..555560 - 209 39995628 - GSU0521 - methyltransferase, putative 519 63.89 0 555700..557031 + 443 39995629 rhlB GSU0522 - ATP-dependent RNA helicase RhlB 520 67.67 +1 557100..558890 - 596 39995630 pabB GSU0523 - para-aminobenzoate synthase, component I 521 65.82 0 558887..559594 - 235 39995631 - GSU0524 - hypothetical protein 522 62.31 0 559887..560345 - 152 39995632 dtd GSU0525 - D-tyrosyl-tRNA deacylase 523 69.35 +1 560342..560863 - 173 39995633 - GSU0526 - hypothetical protein 524 64.42 0 561008..562702 - 564 39995634 - GSU0527 - TrkA domain-containing protein 525 69.21 +1 562724..563548 - 274 39995635 - GSU0528 - nitroreductase family protein 526 64.42 0 563536..564426 - 296 39995636 nfo GSU0529 - endonuclease IV 527 65.48 0 564430..564849 - 139 39995637 - GSU0530 - HIT family protein 528 62.43 0 564955..565803 - 282 39995638 dapF GSU0531 - diaminopimelate epimerase 529 51.25 -1 565957..566235 - 92 39995639 - GSU0532 - hypothetical protein 530 60.74 0 566260..566664 + 134 39995640 - GSU0533 - cytochrome c family protein, putative 531 58.28 0 566814..567278 + 154 39995641 - GSU0534 - Rrf2 family protein 532 65.04 0 567299..568222 + 307 39995642 cysK GSU0535 - cysteine synthase A 533 64.69 0 568286..569095 + 269 39995643 - GSU0536 - hypothetical protein 534 64.76 0 569343..571391 + 682 39995644 - GSU0537 - sensory box/GGDEF family protein 535 60.14 0 571372..571815 - 147 39995645 - GSU0538 - HSP20 family protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.