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Geobacter sulfurreducens PCA, complete genome - 1..3814139 3446 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 349 51.43 -1 379791..381359 + 522 39995459 nuoM-1 GSU0350 - NADH dehydrogenase I, M subunit 350 51.89 -1 381394..382848 + 484 39995460 nuoN-1 GSU0351 - NADH dehydrogenase I, N subunit 351 56.20 0 382951..383466 + 171 39995461 psaD GSU0352 - thiol peroxidase 352 55.70 0 383605..384051 + 148 39995462 - GSU0353 - hypothetical protein 353 59.36 0 384038..385228 + 396 39995463 - GSU0354 - hypothetical protein 354 56.05 0 385231..385635 + 134 39995464 - GSU0355 - hypothetical protein 355 59.80 0 387351..388952 - 533 39995465 - GSU0357 - cytochrome c family protein 356 61.27 0 388985..389410 - 141 39995466 - GSU0358 - iron-sulfur cluster-binding protein 357 60.42 0 389808..391184 - 458 39995467 - GSU0359 - sensory box protein/sigma-54 dependent transcriptional regulator 358 60.62 0 391444..392733 + 429 39995468 - GSU0360 - OmpA domain-containing protein 359 59.96 0 392844..393737 - 297 39995469 - GSU0361 - peptidyl-prolyl cis-trans isomerase domain-containing protein 360 56.80 0 393987..394442 + 151 39995470 - GSU0362 - hypothetical protein 361 65.40 0 394457..396979 - 840 39995471 dinG GSU0363 - ATP-dependent helicase DinG 362 60.51 0 397076..397351 - 91 39995472 cyd-1 GSU0364 - cytochrome c3 363 60.07 0 397486..397773 - 95 39995473 cyd-2 GSU0365 - cytochrome c3 364 66.45 +1 397904..398824 + 306 39995474 - GSU0366 - transcriptional regulator, putative 365 66.45 +1 398821..399738 + 305 39995475 - GSU0367 - radical SAM family protein 366 61.39 0 399774..401024 - 416 39995476 - GSU0368 - putative lipoprotein 367 65.20 0 401190..401462 - 90 39995477 - GSU0369 - FlhB domain-containing protein 368 69.85 +1 401449..403206 - 585 39995478 - GSU0370 - hypothetical protein 369 64.80 0 403252..405816 - 854 39995479 - GSU0371 - carbohydrate phosphorylase family protein 370 63.71 0 406003..407388 - 461 39995480 - GSU0372 - sigma-54 dependent DNA-binding response regulator 371 61.61 0 407414..408916 - 500 39995481 - GSU0373 - sensor histidine kinase 372 65.77 0 409015..409347 + 110 39995482 hypA GSU0374 - hydrogenase expression/formation protein hupa 373 65.38 0 409470..410558 + 362 39995483 gcvT GSU0375 - glycine cleavage system T protein 374 60.80 0 410614..410988 + 124 39995484 gcvH-1 GSU0376 - glycine cleavage system H protein 375 67.56 +1 410988..412334 + 448 39995485 - GSU0377 - glycine dehydrogenase subunit 1 376 64.18 0 412325..413770 + 481 39995486 - GSU0378 - glycine dehydrogenase subunit 2 377 70.49 +1 413770..414579 + 269 39995487 - GSU0379 - biotin/lipoate A/B protein ligase family protein 378 66.89 +1 414576..415487 + 303 39995488 lipA GSU0380 - lipoyl synthase 379 59.11 0 415484..415708 + 74 39995489 - GSU0381 - putative lipoprotein 380 61.73 0 415717..416121 + 134 39995490 - GSU0382 - hypothetical protein 381 62.00 0 416237..416665 + 142 39995491 - GSU0383 - peptidyl-prolyl cis-trans isomerase, FKBP-type 382 57.65 0 416747..417223 - 158 39995492 - GSU0384 - hypothetical protein 383 65.20 0 417404..418288 + 294 39995493 - GSU0385 - NADH dehydrogenase subunit, putative 384 63.77 0 418326..419015 - 229 39995494 radC GSU0386 - DNA repair protein RadC 385 63.33 0 419107..419916 - 269 39995495 - GSU0387 - undecaprenol kinase, putative 386 56.47 0 420116..420733 + 205 39995496 - GSU0388 - hypothetical protein 387 60.48 0 420726..421727 + 333 39995497 - GSU0389 - phosphate transporter, putative 388 59.83 0 421780..422262 - 160 39995498 - GSU0390 - hypothetical protein 389 65.53 0 422509..423822 + 437 39995499 - GSU0391 - Outer membrane efflux family protein 390 67.21 +1 423819..424931 + 370 39995500 - GSU0392 - RND family efflux transporter MFP subunit 391 65.00 0 424968..425147 + 59 39995501 - GSU0393 - hypothetical protein 392 62.93 0 425153..428386 + 1077 39995502 - GSU0394 - AcrB/AcrD/AcrF family protein 393 63.17 0 428361..428789 + 142 39995503 - GSU0395 - hypothetical protein 394 55.40 0 428803..429015 + 70 39995504 - GSU0396 - hypothetical protein 395 64.86 0 429012..429842 + 276 39995505 - GSU0397 - metallo-beta-lactamase family protein 396 64.71 0 429887..430243 + 118 39995506 - GSU0398 - phage shock protein E, putative 397 66.67 +1 430266..430541 + 91 39995507 - GSU0399 - ArsR family transcriptional regulator 398 62.42 0 430815..432464 + 549 39995508 - GSU0400 - methyl-accepting chemotaxis protein 399 59.57 0 432601..434220 + 539 39995509 - GSU0401 - methyl-accepting chemotaxis protein, putative 400 54.41 -1 434398..434805 + 135 39995510 - GSU0402 - hemerythrin family protein 401 55.65 0 434966..435328 + 120 39995511 cheY-1 GSU0403 - chemotaxis protein CheY 402 56.80 0 435325..435831 + 168 39995512 - GSU0404 - hypothetical protein 403 61.08 0 435856..436965 + 369 39995513 - GSU0405 - response regulator 404 63.64 0 437013..439259 + 748 39995514 - GSU0406 - TPR domain-containing protein 405 58.81 0 439493..439912 + 139 39995515 flgB GSU0407 - flagellar basal-body rod protein FlgB 406 62.59 0 439915..440355 + 146 39995516 flgC GSU0408 - flagellar basal-body rod protein FlgC 407 58.75 0 440461..440763 + 100 39995517 fliE GSU0409 - flagellar hook-basal body complex protein FliE 408 61.11 0 440788..442371 + 527 39995518 fliF GSU0410 - flagellar M-ring protein FliF 409 58.81 0 442383..443375 + 330 39995519 fliG GSU0411 - flagellar motor switch protein FliG 410 67.01 +1 443362..444243 + 293 39995520 - GSU0412 - flagellar assembly protein fliH, putative 411 62.52 0 444236..445561 + 441 39995521 fliI GSU0413 - flagellum-specific ATP synthase FliI 412 59.18 0 445621..446061 + 146 39995522 - GSU0414 - flagellar protein FliJ, putative 413 65.29 0 446076..446585 + 169 39995523 - GSU0415 - hypothetical protein 414 65.21 0 446799..448238 + 479 39995524 - GSU0416 - hypothetical protein 415 59.36 0 448263..448919 + 218 39995525 flgD GSU0417 - flagellar hook assembly protein FlgD 416 59.69 0 448927..449313 + 128 39995526 - GSU0418 - hypothetical protein 417 62.86 0 449476..450735 + 419 39995527 flgE GSU0419 - flagellar hook protein FlgE 418 59.96 0 451106..451627 + 173 39995528 - GSU0420 - flagellar protein FliL 419 59.57 0 451662..452648 + 328 39995529 fliM GSU0421 - flagellar motor switch protein FliM 420 57.52 0 452645..452950 + 101 39995530 fliN GSU0422 - flagellar motor switch protein FliN 421 61.59 0 453450..454217 + 255 39995531 fliP GSU0423 - flagellar biosynthesis protein FliP 422 58.89 0 454230..454499 + 89 39995532 fliQ GSU0424 - flagellar biosynthetic protein FliQ 423 60.63 0 454550..455344 + 264 39995533 fliR GSU0425 - flagellar biosynthesis protein FliR 424 55.05 -1 455349..456407 + 352 39995534 flhB GSU0426 - flagellar biosynthesis protein FlhB 425 66.03 0 456466..456936 - 156 39995535 - GSU0427 - putative lipoprotein 426 61.44 0 457223..457777 + 184 39995536 - GSU0428 - putative lipoprotein 427 68.18 +1 457774..459165 + 463 39995537 - GSU0429 - hypothetical protein 428 64.22 0 459169..459576 + 135 39995538 - GSU0430 - tail lysozyme, putative 429 64.19 0 459605..461338 + 577 39995539 - GSU0431 - hypothetical protein 430 65.76 0 461302..462294 + 330 39995540 - GSU0432 - hypothetical protein 431 68.87 +1 462307..464934 + 875 39995541 - GSU0433 - clpB protein, putative 432 62.99 0 464944..465948 - 334 39995542 - GSU0434 - hypothetical protein 433 65.76 0 466122..467771 + 549 39995543 - GSU0435 - MSHA biogenesis protein MshE, putative 434 62.56 0 467785..468855 + 356 39995544 pilT-3 GSU0436 - twitching motility protein PilT 435 68.57 +1 469239..470654 + 471 39995545 ubiD GSU0437 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 436 64.03 0 470654..471184 + 176 39995546 - GSU0438 - putative lipoprotein 437 64.66 0 471184..472080 + 298 39995547 ubiA GSU0439 - prenyltransferase 438 65.71 0 472077..472700 + 207 39995548 - GSU0440 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative 439 65.19 0 472705..473790 + 361 39995549 - GSU0441 - radical SAM domain-containing protein 440 65.73 0 473790..474854 + 354 39995550 - GSU0442 - radical SAM domain-containing protein 441 65.71 0 475021..476166 + 381 39995551 - GSU0443 - ribonuclease D, putative 442 65.01 0 476304..477026 - 240 39995552 - GSU0444 - hypothetical protein 443 66.02 0 476386..477006 + 206 39995553 - GSU0445 - hypothetical protein 444 65.39 0 477066..477848 - 260 39995554 - GSU0446 - hypothetical protein 445 67.00 +1 477851..478750 - 299 39995555 prmA GSU0447 - ribosomal protein L11 methyltransferase 446 64.43 0 478895..480058 + 387 39995556 - GSU0448 - hydrolase, putative 447 44.76 -2 480111..480215 - 34 39995557 - GSU0449 - hypothetical protein 448 61.60 0 480195..481004 + 269 39995558 - GSU0450 - hypothetical protein 60.71 MEAN 5.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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